| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221367
Identifier: 78221367
GI number: 78221367
Start: 169144
End: 169854
Strand: Reverse
Name: 78221367
Synonym: Gmet_0140
Alternate gene names: NA
Gene position: 169854-169144 (Counterclockwise)
Preceding gene: 78221368
Following gene: 78221366
Centisome position: 4.25
GC content: 65.26
Gene sequence:
>711_bases ATGATCAAGAGAATCTACGAATTTTTGGCCTCCCTCTCCCTCGGTCTCTGGCTCATGGGGGGAGTCATGGCCTTTCTGGC AGCAGGGTCGTTTGGTGGAGAGGACGCAGCGTCCCTGAACGAAATGCCCCTCTTCGTCTGGCTTGGCGCGGCCCCCTTCT CCGCCTCCTGGTGGCTCTGGGGGACTCTGGTCCTGCTGGCCCTCATGGTGGTGAACACGCTCTTGTGCAGCGTGGAGGCG ATCCGGAAGCGCTACGGCAAGAGCGGACTCCTGGCTCTCCTGGCACCCCAGCTCATGCACGCGGGGTTCCTCCTCATCGT TCTGGCCCACCTTCTGAGCGCCAAAGGGGGGGAGAAACAGGCGATGCAGCTCTTCGAGGGGTCCAACCTCCGCTTTCCCG GCGGGAGTTTCGTCATGGTTGACGCCATCGAGGTGGAAACCGATCCCCGGGGGATGCCGCTCGATTACCGGGCCCGGATG CGGGTCGTGGAGCAGGGAAGATCAACGCCGGTGACGGTGCGGCCCAACGAACCCCTGTTCCATGACGGGGTCGGCATCTA CCTGAAGCAGGCGGCGCCGTTCCCGTACCCAACCGCCTATGTGGAGATCCACCGGGAACCGGGCGCGGGGTGGGCCCTGG CCGGCGCGCTTCTCTTCACCGCGGGGAACGTCATGCTCCTGGCGGTGCGGCGGGAGCGGCGAACGGCGTAA
Upstream 100 bases:
>100_bases CGCTATCCGTCACGGATTCAGGAGAGGGTATGCCGCGTATCATATTTAGTGGCCCCGTTATTGCATTGGTGATCCCTGCG ATCACATCGGGTTTTTCGCG
Downstream 100 bases:
>100_bases ATAGCCGTTGCGGCGAAGGATTGTTGTGGTAAGATGGATAGCCTGGCGGCAAAAGCCGGCTCTGCCGGATGCATGGCCCG TTTCGGAATACATGGGGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MIKRIYEFLASLSLGLWLMGGVMAFLAAGSFGGEDAASLNEMPLFVWLGAAPFSASWWLWGTLVLLALMVVNTLLCSVEA IRKRYGKSGLLALLAPQLMHAGFLLIVLAHLLSAKGGEKQAMQLFEGSNLRFPGGSFVMVDAIEVETDPRGMPLDYRARM RVVEQGRSTPVTVRPNEPLFHDGVGIYLKQAAPFPYPTAYVEIHREPGAGWALAGALLFTAGNVMLLAVRRERRTA
Sequences:
>Translated_236_residues MIKRIYEFLASLSLGLWLMGGVMAFLAAGSFGGEDAASLNEMPLFVWLGAAPFSASWWLWGTLVLLALMVVNTLLCSVEA IRKRYGKSGLLALLAPQLMHAGFLLIVLAHLLSAKGGEKQAMQLFEGSNLRFPGGSFVMVDAIEVETDPRGMPLDYRARM RVVEQGRSTPVTVRPNEPLFHDGVGIYLKQAAPFPYPTAYVEIHREPGAGWALAGALLFTAGNVMLLAVRRERRTA >Mature_236_residues MIKRIYEFLASLSLGLWLMGGVMAFLAAGSFGGEDAASLNEMPLFVWLGAAPFSASWWLWGTLVLLALMVVNTLLCSVEA IRKRYGKSGLLALLAPQLMHAGFLLIVLAHLLSAKGGEKQAMQLFEGSNLRFPGGSFVMVDAIEVETDPRGMPLDYRARM RVVEQGRSTPVTVRPNEPLFHDGVGIYLKQAAPFPYPTAYVEIHREPGAGWALAGALLFTAGNVMLLAVRRERRTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25750; Mature: 25750
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKRIYEFLASLSLGLWLMGGVMAFLAAGSFGGEDAASLNEMPLFVWLGAAPFSASWWLW CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHH GTLVLLALMVVNTLLCSVEAIRKRYGKSGLLALLAPQLMHAGFLLIVLAHLLSAKGGEKQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH AMQLFEGSNLRFPGGSFVMVDAIEVETDPRGMPLDYRARMRVVEQGRSTPVTVRPNEPLF HHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEECCCCCCC HDGVGIYLKQAAPFPYPTAYVEIHREPGAGWALAGALLFTAGNVMLLAVRRERRTA CCCCCEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEEHHCCCC >Mature Secondary Structure MIKRIYEFLASLSLGLWLMGGVMAFLAAGSFGGEDAASLNEMPLFVWLGAAPFSASWWLW CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHH GTLVLLALMVVNTLLCSVEAIRKRYGKSGLLALLAPQLMHAGFLLIVLAHLLSAKGGEKQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH AMQLFEGSNLRFPGGSFVMVDAIEVETDPRGMPLDYRARMRVVEQGRSTPVTVRPNEPLF HHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEECCCCCCC HDGVGIYLKQAAPFPYPTAYVEIHREPGAGWALAGALLFTAGNVMLLAVRRERRTA CCCCCEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEEHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA