| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221366
Identifier: 78221366
GI number: 78221366
Start: 167907
End: 169037
Strand: Reverse
Name: 78221366
Synonym: Gmet_0139
Alternate gene names: NA
Gene position: 169037-167907 (Counterclockwise)
Preceding gene: 78221367
Following gene: 78221362
Centisome position: 4.23
GC content: 66.84
Gene sequence:
>1131_bases ATGGGACAGGGAATCAGGACGGCAGTGGTCACGGTCGCGGCACTAGCGGCGTGGGGAGCGGGGAGCGGGGTCTTCGCCGC CGGAATCGATGACGGTGCGGTGACCGCGCCGAAGCTCGCCGACGGAGCCGTCACCTACCGGGCCATCGTCCCCGGCGCCG TTACCAACAGCAAGATCGTCGACGGCGCCGTCACCGACGAGAAACTCGGCTTCGGTGCGGTGACCACGCCGAAGCTCGCC GACGGCGCCGTCACCGACGCCAAGATCGCCGGACCCATCGCCGGCCACAAGATCGGCCGCCACGGCCACGACGCTGCCGA CATCGTCCAGGGGACCATTGACGCCGCCCGTCTTCCCGTGGGGACCGCCCCCGGCACGGTTGCCGCCGGCGACCATACCC ACGAAGGGCTTCTCAGAAGGCCCGCCGAACTCATCACCGTGGCCCTGAGCGGCGGTGATTTCACCAATCCCATCGACGCC CTCAATTCAATCACCGACGCATCCGCCGATAAACCCTACCTGGTGAAAATCATGCCCGGCACCTATGACCTCGGAATCGA CACCCTCGTCATGAAGTCCTACGTGGACATCGAAGGCTCCGGCGAGCTGACTACCCGGCTGCGGGGGAACGCCGCCGATG CCGGCGTAGTGGCCGGGGCGTCCATGGCCGAACTGCGGAACCTCACCGTGCAGGCCAGCGGCACCGAGGGGACCATCGTC GGCATCTTCAACGGGAGCGCCGCGCCGCGCATCGCCCACGTGACCGTCAGCGCCGAGGGTGGCAAGGGGGCCTACGGCAT CTACAACCTCATGGCGGCGCCGGTTATCGCGGACGTGACCGTCTTGGCCGGGGGGAGCGACACGGCCTTCGGCGTCTTCA ACCTCCACTCCTCCCCCATTGTCAGAAACTCGGCCATCAAGGCTGGAAACGGCATCTACAGCTACTATTCCGGCACAGTG ACCGTGGAGGGGACCTCGGTTAACGCCTCCCTCACCACCCTCTTCACCGATGTCGGCGCCACCACCCTCGTGGCGAATTC ACGCCTCACGGGGGGACGGCCCGCATCCAACGGCATCATGAAATGCGTCGGGGTCTACGACGGGAACTACGAGCCGGTCT CCTGCCGCTGA
Upstream 100 bases:
>100_bases GTTGCGGCGAAGGATTGTTGTGGTAAGATGGATAGCCTGGCGGCAAAAGCCGGCTCTGCCGGATGCATGGCCCGTTTCGG AATACATGGGGAGGATATGG
Downstream 100 bases:
>100_bases TAGGTTTTTTCAGTACCGCATCCGCACCCGGTAGACGAGGGTCGCCTCCCCGTCCTTGGGCACCGGCACCTTGAACACGG CGCTGAAGGCGTCCCCCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 376; Mature: 375
Protein sequence:
>376_residues MGQGIRTAVVTVAALAAWGAGSGVFAAGIDDGAVTAPKLADGAVTYRAIVPGAVTNSKIVDGAVTDEKLGFGAVTTPKLA DGAVTDAKIAGPIAGHKIGRHGHDAADIVQGTIDAARLPVGTAPGTVAAGDHTHEGLLRRPAELITVALSGGDFTNPIDA LNSITDASADKPYLVKIMPGTYDLGIDTLVMKSYVDIEGSGELTTRLRGNAADAGVVAGASMAELRNLTVQASGTEGTIV GIFNGSAAPRIAHVTVSAEGGKGAYGIYNLMAAPVIADVTVLAGGSDTAFGVFNLHSSPIVRNSAIKAGNGIYSYYSGTV TVEGTSVNASLTTLFTDVGATTLVANSRLTGGRPASNGIMKCVGVYDGNYEPVSCR
Sequences:
>Translated_376_residues MGQGIRTAVVTVAALAAWGAGSGVFAAGIDDGAVTAPKLADGAVTYRAIVPGAVTNSKIVDGAVTDEKLGFGAVTTPKLA DGAVTDAKIAGPIAGHKIGRHGHDAADIVQGTIDAARLPVGTAPGTVAAGDHTHEGLLRRPAELITVALSGGDFTNPIDA LNSITDASADKPYLVKIMPGTYDLGIDTLVMKSYVDIEGSGELTTRLRGNAADAGVVAGASMAELRNLTVQASGTEGTIV GIFNGSAAPRIAHVTVSAEGGKGAYGIYNLMAAPVIADVTVLAGGSDTAFGVFNLHSSPIVRNSAIKAGNGIYSYYSGTV TVEGTSVNASLTTLFTDVGATTLVANSRLTGGRPASNGIMKCVGVYDGNYEPVSCR >Mature_375_residues GQGIRTAVVTVAALAAWGAGSGVFAAGIDDGAVTAPKLADGAVTYRAIVPGAVTNSKIVDGAVTDEKLGFGAVTTPKLAD GAVTDAKIAGPIAGHKIGRHGHDAADIVQGTIDAARLPVGTAPGTVAAGDHTHEGLLRRPAELITVALSGGDFTNPIDAL NSITDASADKPYLVKIMPGTYDLGIDTLVMKSYVDIEGSGELTTRLRGNAADAGVVAGASMAELRNLTVQASGTEGTIVG IFNGSAAPRIAHVTVSAEGGKGAYGIYNLMAAPVIADVTVLAGGSDTAFGVFNLHSSPIVRNSAIKAGNGIYSYYSGTVT VEGTSVNASLTTLFTDVGATTLVANSRLTGGRPASNGIMKCVGVYDGNYEPVSCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37685; Mature: 37554
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQGIRTAVVTVAALAAWGAGSGVFAAGIDDGAVTAPKLADGAVTYRAIVPGAVTNSKIV CCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEE DGAVTDEKLGFGAVTTPKLADGAVTDAKIAGPIAGHKIGRHGHDAADIVQGTIDAARLPV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHCCC GTAPGTVAAGDHTHEGLLRRPAELITVALSGGDFTNPIDALNSITDASADKPYLVKIMPG CCCCCCEECCCCCHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEECCC TYDLGIDTLVMKSYVDIEGSGELTTRLRGNAADAGVVAGASMAELRNLTVQASGTEGTIV CCCCCHHHEEHHHEEEECCCCCEEEEECCCCCCCCEECCCCHHHHHEEEEEECCCCCEEE GIFNGSAAPRIAHVTVSAEGGKGAYGIYNLMAAPVIADVTVLAGGSDTAFGVFNLHSSPI EEECCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHEEEEEEECCCCCEEEEEEECCCCC VRNSAIKAGNGIYSYYSGTVTVEGTSVNASLTTLFTDVGATTLVANSRLTGGRPASNGIM EECCCCCCCCCEEEEECCEEEEECCCCCCEEEEEEHHCCCEEEEECCCCCCCCCCCCCEE KCVGVYDGNYEPVSCR EEEEEECCCCCCCCCC >Mature Secondary Structure GQGIRTAVVTVAALAAWGAGSGVFAAGIDDGAVTAPKLADGAVTYRAIVPGAVTNSKIV CCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEE DGAVTDEKLGFGAVTTPKLADGAVTDAKIAGPIAGHKIGRHGHDAADIVQGTIDAARLPV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHCCC GTAPGTVAAGDHTHEGLLRRPAELITVALSGGDFTNPIDALNSITDASADKPYLVKIMPG CCCCCCEECCCCCHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEECCC TYDLGIDTLVMKSYVDIEGSGELTTRLRGNAADAGVVAGASMAELRNLTVQASGTEGTIV CCCCCHHHEEHHHEEEECCCCCEEEEECCCCCCCCEECCCCHHHHHEEEEEECCCCCEEE GIFNGSAAPRIAHVTVSAEGGKGAYGIYNLMAAPVIADVTVLAGGSDTAFGVFNLHSSPI EEECCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHEEEEEEECCCCCEEEEEEECCCCC VRNSAIKAGNGIYSYYSGTVTVEGTSVNASLTTLFTDVGATTLVANSRLTGGRPASNGIM EECCCCCCCCCEEEEECCEEEEECCCCCCEEEEEEHHCCCEEEEECCCCCCCCCCCCCEE KCVGVYDGNYEPVSCR EEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA