| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is 78221365
Identifier: 78221365
GI number: 78221365
Start: 166488
End: 167897
Strand: Direct
Name: 78221365
Synonym: Gmet_0138
Alternate gene names: NA
Gene position: 166488-167897 (Clockwise)
Preceding gene: 78221364
Following gene: 78221369
Centisome position: 4.16
GC content: 65.39
Gene sequence:
>1410_bases ATGAGACAGCGCTTCCTTCCCCTACTCGCCCTCCTCTCCCTTCTCCTCCCCCTTCCCGCACCCGCCGCCCCCACCGTTTC CACGGTGGCGGACCAGACGGGCATCGCCCTCACCATCTACAACCGGAACCTCGGCCTCGTGAAGGACCGTCGGGAGATCC GCCTCGCCCCGGGAAACGGCGAGCTCCGCTTCATGGACGTGGCGGCCCAGATCATCCCCACCAGCGTCTCCATCGCCTCC CTCGCCGGCGGGGAACTCCAGGTCCTGGAGCAGAACTACGAGTATGACCTCCTCTCACCCCAGAAGCTCATGGACAAGTA CGTGGGGAAGGAGGTGAAGCTCCACCAGAAGAACCCTTACACCGAGCGGGAAGAGGTGGTGACCGCCACGCTCCTCTCCA ATAACGGCGGGCCGGTCTACCGCATCGGCGACGAGATCACCTTCGGCCACCCCGGACGCCTGATCTTTCCCGGGGTCCCC GACGACCTCATCGCCCGGCCGACCCTGGTCTGGCTCCTGGAGGGAGCTGCAGTCGAGAAGCGGACCATCGAGGCCTCCTA CCTCACCGGCGGCATCTCCTGGCGGGCCGACTACGTGGTGACCCTGAGCGAGAAGGACGACCAGGCGAACCTTGCCGGCT GGGTCACCATCGACAACCGGAGCGGCGCCGCCTACCGCAATGCCACCCTCAAGCTCGTGGCCGGCGACGTGAACCGGGTG CAGGAGCAGTCCACCCGCTTCGCCAAGTCCGTGCGGGCCGAAGCCATGGCACCCGCTCCCCAGTTCCAGGAGGAGGCCTT CTTCGAGTACCACCTCTATACCCTCCAGCGCCCCTCCACCATCAAGGAGAACCAGACCAAGCAGATCAATCTGGTGACCG CCGATGCCGTGCCGGTGAAGAAGGAATTCCTCCTGAAGGGGGAGAGTTTCTACTACCAGAGCCCCGCCGGCGAGGTCGAG AAGCAGAAGGTGGGGGTCTTCGTGGAGATGGAGAACCGGAAGGAGCACAACCTGGGGATGCCGCTCCCCAAGGGGATCGT GCGGGTCTACAAGCGGGATGCCGGGGGAAGCCTCCAGTTCGTGGGGGAGGACACCATCGACCACACCCCGGAGAAGGAGA CGGTGCGGGTGAAGCTGGGGGACGCCTTCGACGTGGTGGGGGAGCGGAAGCAGACCGAGTGGCGGAAGGTGGCCAGCGAC ACCTACGAGTCGGCCTTTGAGATAAGGCTTCGCAACCACAAGAAGGAGGATATCACCGTGAAGGTGGTGGAGCCGGTCCC CGGCGACTGGCAGATGCTCTCCTCATCCCACCCCCACGAGAAGGGGGACGCCTTCAGCGCCGTGTTCAAGGTGCCGGTGC CCAAGGACGGGGAGGCGACCCTCGTCTACCGGGTGCGGATGCGGTACTGA
Upstream 100 bases:
>100_bases GCAGGCAACACGCACGTTTCACAAGAGGGCGTCCTGACGGGCGCCCTTTTTTGTGGTATATCCTCCTGTGTCCGCAACAA ACCATGACGCGAGGTATGCC
Downstream 100 bases:
>100_bases AAAAACCTATCAGCGGCAGGAGACCGGCTCGTAGTTCCCGTCGTAGACCCCGACGCATTTCATGATGCCGTTGGATGCGG GCCGTCCCCCCGTGAGGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 469; Mature: 469
Protein sequence:
>469_residues MRQRFLPLLALLSLLLPLPAPAAPTVSTVADQTGIALTIYNRNLGLVKDRREIRLAPGNGELRFMDVAAQIIPTSVSIAS LAGGELQVLEQNYEYDLLSPQKLMDKYVGKEVKLHQKNPYTEREEVVTATLLSNNGGPVYRIGDEITFGHPGRLIFPGVP DDLIARPTLVWLLEGAAVEKRTIEASYLTGGISWRADYVVTLSEKDDQANLAGWVTIDNRSGAAYRNATLKLVAGDVNRV QEQSTRFAKSVRAEAMAPAPQFQEEAFFEYHLYTLQRPSTIKENQTKQINLVTADAVPVKKEFLLKGESFYYQSPAGEVE KQKVGVFVEMENRKEHNLGMPLPKGIVRVYKRDAGGSLQFVGEDTIDHTPEKETVRVKLGDAFDVVGERKQTEWRKVASD TYESAFEIRLRNHKKEDITVKVVEPVPGDWQMLSSSHPHEKGDAFSAVFKVPVPKDGEATLVYRVRMRY
Sequences:
>Translated_469_residues MRQRFLPLLALLSLLLPLPAPAAPTVSTVADQTGIALTIYNRNLGLVKDRREIRLAPGNGELRFMDVAAQIIPTSVSIAS LAGGELQVLEQNYEYDLLSPQKLMDKYVGKEVKLHQKNPYTEREEVVTATLLSNNGGPVYRIGDEITFGHPGRLIFPGVP DDLIARPTLVWLLEGAAVEKRTIEASYLTGGISWRADYVVTLSEKDDQANLAGWVTIDNRSGAAYRNATLKLVAGDVNRV QEQSTRFAKSVRAEAMAPAPQFQEEAFFEYHLYTLQRPSTIKENQTKQINLVTADAVPVKKEFLLKGESFYYQSPAGEVE KQKVGVFVEMENRKEHNLGMPLPKGIVRVYKRDAGGSLQFVGEDTIDHTPEKETVRVKLGDAFDVVGERKQTEWRKVASD TYESAFEIRLRNHKKEDITVKVVEPVPGDWQMLSSSHPHEKGDAFSAVFKVPVPKDGEATLVYRVRMRY >Mature_469_residues MRQRFLPLLALLSLLLPLPAPAAPTVSTVADQTGIALTIYNRNLGLVKDRREIRLAPGNGELRFMDVAAQIIPTSVSIAS LAGGELQVLEQNYEYDLLSPQKLMDKYVGKEVKLHQKNPYTEREEVVTATLLSNNGGPVYRIGDEITFGHPGRLIFPGVP DDLIARPTLVWLLEGAAVEKRTIEASYLTGGISWRADYVVTLSEKDDQANLAGWVTIDNRSGAAYRNATLKLVAGDVNRV QEQSTRFAKSVRAEAMAPAPQFQEEAFFEYHLYTLQRPSTIKENQTKQINLVTADAVPVKKEFLLKGESFYYQSPAGEVE KQKVGVFVEMENRKEHNLGMPLPKGIVRVYKRDAGGSLQFVGEDTIDHTPEKETVRVKLGDAFDVVGERKQTEWRKVASD TYESAFEIRLRNHKKEDITVKVVEPVPGDWQMLSSSHPHEKGDAFSAVFKVPVPKDGEATLVYRVRMRY
Specific function: Unknown
COG id: COG5316
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52468; Mature: 52468
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQRFLPLLALLSLLLPLPAPAAPTVSTVADQTGIALTIYNRNLGLVKDRREIRLAPGNG CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEEEEECCCCCEECCCEEEEECCCC ELRFMDVAAQIIPTSVSIASLAGGELQVLEQNYEYDLLSPQKLMDKYVGKEVKLHQKNPY CEEEEEEHHHHHCCCEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHCCCEEEEECCCCC TEREEVVTATLLSNNGGPVYRIGDEITFGHPGRLIFPGVPDDLIARPTLVWLLEGAAVEK CCHHHEEEEEEEECCCCEEEEECCEEEECCCCCEEECCCCHHHHCCCEEEEEECCCCCCC RTIEASYLTGGISWRADYVVTLSEKDDQANLAGWVTIDNRSGAAYRNATLKLVAGDVNRV EEEEEEEEECCEEEEEEEEEEEECCCCCCCEEEEEEEECCCCCEEECCEEEEEECCHHHH QEQSTRFAKSVRAEAMAPAPQFQEEAFFEYHLYTLQRPSTIKENQTKQINLVTADAVPVK HHHHHHHHHHHHHHHCCCCCCHHHHHEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCC KEFLLKGESFYYQSPAGEVEKQKVGVFVEMENRKEHNLGMPLPKGIVRVYKRDAGGSLQF HHHEECCCCEEEECCCCCCCHHHEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEE VGEDTIDHTPEKETVRVKLGDAFDVVGERKQTEWRKVASDTYESAFEIRLRNHKKEDITV EECCCCCCCCCCCEEEEEECCHHHHHCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCEEE KVVEPVPGDWQMLSSSHPHEKGDAFSAVFKVPVPKDGEATLVYRVRMRY EEECCCCCCHHHHCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEEECC >Mature Secondary Structure MRQRFLPLLALLSLLLPLPAPAAPTVSTVADQTGIALTIYNRNLGLVKDRREIRLAPGNG CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEEEEECCCCCEECCCEEEEECCCC ELRFMDVAAQIIPTSVSIASLAGGELQVLEQNYEYDLLSPQKLMDKYVGKEVKLHQKNPY CEEEEEEHHHHHCCCEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHCCCEEEEECCCCC TEREEVVTATLLSNNGGPVYRIGDEITFGHPGRLIFPGVPDDLIARPTLVWLLEGAAVEK CCHHHEEEEEEEECCCCEEEEECCEEEECCCCCEEECCCCHHHHCCCEEEEEECCCCCCC RTIEASYLTGGISWRADYVVTLSEKDDQANLAGWVTIDNRSGAAYRNATLKLVAGDVNRV EEEEEEEEECCEEEEEEEEEEEECCCCCCCEEEEEEEECCCCCEEECCEEEEEECCHHHH QEQSTRFAKSVRAEAMAPAPQFQEEAFFEYHLYTLQRPSTIKENQTKQINLVTADAVPVK HHHHHHHHHHHHHHHCCCCCCHHHHHEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCC KEFLLKGESFYYQSPAGEVEKQKVGVFVEMENRKEHNLGMPLPKGIVRVYKRDAGGSLQF HHHEECCCCEEEECCCCCCCHHHEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEE VGEDTIDHTPEKETVRVKLGDAFDVVGERKQTEWRKVASDTYESAFEIRLRNHKKEDITV EECCCCCCCCCCCEEEEEECCHHHHHCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCEEE KVVEPVPGDWQMLSSSHPHEKGDAFSAVFKVPVPKDGEATLVYRVRMRY EEECCCCCCHHHHCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA