| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is pyk [H]
Identifier: 78221349
GI number: 78221349
Start: 147911
End: 149353
Strand: Direct
Name: pyk [H]
Synonym: Gmet_0122
Alternate gene names: 78221349
Gene position: 147911-149353 (Clockwise)
Preceding gene: 78221348
Following gene: 78221350
Centisome position: 3.7
GC content: 65.42
Gene sequence:
>1443_bases ATGGATAAATCGTCGCGCAAAACCAAGATCGTAGCCACCCTCGGACCGGCCAGCTCCTCGCCGGAGATGATCAGCAAGCT CATGGAGGCAGGGGCAGACCTTTTCCGCCTCAACTTCTCCCACGGGGCCAACGACCAGCGCCGGGAGACCATTGCCACCA TCCGGCGTCTTTCTGCCGCCCGGGGAAAGGAGATCGGCATCCTGGCCGACCTCCAGGGGCCAAAGATCAGGACCGGCCGC ATGGAGAACGGCGCCATCTCCCTGCGCAAGGGAGACCCCCTCGACATCGTCACCGATGAGGTCCTCGGCACCCCGACCCT CATCTCCACCATCTACAAGGCCCTCCCCCATGACGTGAAGCCCGGCTCCCGCATTCTCATGGACGACGGCCTCATCGAGC TGAAGGTCCATTCGGTGGAGGGAAACCTGGTCCGCTGCACCGTGGTGGAGGGGGGAACCCTCAAGGACCTGAAGGGGATC AACCTCCCCGGAGTCCATGTCTCGGCCCCCTCCCTCTCGGAGAAGGATCTGCGGGACCTGGAGTTCTGCCTGGCCGAGGG GGTGGACTACATCGCCCTCTCCTTTGTCCGGAGCGCCGAGGACGTGGAGGGGCTCAAGCGGATCCTCTTCGAGCGCGGCA TCCACATCCCCGTGGTGGCCAAGATCGAGAAGCCCGAGGCCCTGCGCAATTTCAAGAGCATCCTCAAAGCGGCCGACGGT GTCATGGTGGCCCGGGGCGACCTGGGTGTTGAGATCAGCGCCGAGAAGGTCCCCCTCTTCCAGAAAAAAATCATCCGAGC CTGCAACGAGGCGGGGAAGCCGGTTATCACCGCCACCCAGATGCTGGAATCGATGATCAGCCACCCGCGCCCCACCCGGG CCGAGACCTCCGACGTGGCTAACGCCATCCTTGACGGGACCGACGCGGTCATGCTCTCGGGAGAGACCGCCTCGGGGCAG TTCCCCCTGGAAGCGGTGCGGACCATGGCCAAGGTGGCCCTGGATGTGGAGCGCTACGCTCAGATGGAGGACACCCTCCC CCAGCGGCGCCACAACCCGAGCATCGCCGAGGCGGTGGCCGAGGCCGCCTGCCGCGCCGCCGTCACCGTGGACGCCCGGG CCATCTCGGTCATGACCCAGTCGGGGAGCACCGCCGCCCTCATCTCCAAGTTCCGGCCGCCGCTCCCCATCATCGCCTTT ACCCAGTCCCTGGAGACCCGGCGGCGCCTCTCCCTCTACTGGGGGGTGAAGCCGCTCCCCATTGGCCCCATGACCGGCAC CGACGAGCAGATCGCGGCCGTGGAATCGACGTTCCTCTCGGCGGGGTACCGCAAGGGAGACGTGATCGTCATAACCATGG GGGTGCCGGTGGAGGCCCGAGGTTCCACGAACCTTATGAAGGTCCACAAGCTGGGGACGGGGAAGTTTTTCGAGATTTTC TGA
Upstream 100 bases:
>100_bases AAGGTGGACGAACTCCCCTGCTTCGAATGCCACAAATCCCCCACCCCGGCCCACAAGGGGCGGGTCGGGAAATTCCATCA CTGAGGGAACCATCGTTTCC
Downstream 100 bases:
>100_bases CGGAGGTTTGATTCAATGCGCAAGGTGTTCGACGAGACAAAGATCCACCACCTGACACTCCGCAACCGGCTGGTCCGCTC CGCCACCTGGGAGGGGATGT
Product: pyruvate kinase
Products: NA
Alternate protein names: PK [H]
Number of amino acids: Translated: 480; Mature: 480
Protein sequence:
>480_residues MDKSSRKTKIVATLGPASSSPEMISKLMEAGADLFRLNFSHGANDQRRETIATIRRLSAARGKEIGILADLQGPKIRTGR MENGAISLRKGDPLDIVTDEVLGTPTLISTIYKALPHDVKPGSRILMDDGLIELKVHSVEGNLVRCTVVEGGTLKDLKGI NLPGVHVSAPSLSEKDLRDLEFCLAEGVDYIALSFVRSAEDVEGLKRILFERGIHIPVVAKIEKPEALRNFKSILKAADG VMVARGDLGVEISAEKVPLFQKKIIRACNEAGKPVITATQMLESMISHPRPTRAETSDVANAILDGTDAVMLSGETASGQ FPLEAVRTMAKVALDVERYAQMEDTLPQRRHNPSIAEAVAEAACRAAVTVDARAISVMTQSGSTAALISKFRPPLPIIAF TQSLETRRRLSLYWGVKPLPIGPMTGTDEQIAAVESTFLSAGYRKGDVIVITMGVPVEARGSTNLMKVHKLGTGKFFEIF
Sequences:
>Translated_480_residues MDKSSRKTKIVATLGPASSSPEMISKLMEAGADLFRLNFSHGANDQRRETIATIRRLSAARGKEIGILADLQGPKIRTGR MENGAISLRKGDPLDIVTDEVLGTPTLISTIYKALPHDVKPGSRILMDDGLIELKVHSVEGNLVRCTVVEGGTLKDLKGI NLPGVHVSAPSLSEKDLRDLEFCLAEGVDYIALSFVRSAEDVEGLKRILFERGIHIPVVAKIEKPEALRNFKSILKAADG VMVARGDLGVEISAEKVPLFQKKIIRACNEAGKPVITATQMLESMISHPRPTRAETSDVANAILDGTDAVMLSGETASGQ FPLEAVRTMAKVALDVERYAQMEDTLPQRRHNPSIAEAVAEAACRAAVTVDARAISVMTQSGSTAALISKFRPPLPIIAF TQSLETRRRLSLYWGVKPLPIGPMTGTDEQIAAVESTFLSAGYRKGDVIVITMGVPVEARGSTNLMKVHKLGTGKFFEIF >Mature_480_residues MDKSSRKTKIVATLGPASSSPEMISKLMEAGADLFRLNFSHGANDQRRETIATIRRLSAARGKEIGILADLQGPKIRTGR MENGAISLRKGDPLDIVTDEVLGTPTLISTIYKALPHDVKPGSRILMDDGLIELKVHSVEGNLVRCTVVEGGTLKDLKGI NLPGVHVSAPSLSEKDLRDLEFCLAEGVDYIALSFVRSAEDVEGLKRILFERGIHIPVVAKIEKPEALRNFKSILKAADG VMVARGDLGVEISAEKVPLFQKKIIRACNEAGKPVITATQMLESMISHPRPTRAETSDVANAILDGTDAVMLSGETASGQ FPLEAVRTMAKVALDVERYAQMEDTLPQRRHNPSIAEAVAEAACRAAVTVDARAISVMTQSGSTAALISKFRPPLPIIAF TQSLETRRRLSLYWGVKPLPIGPMTGTDEQIAAVESTFLSAGYRKGDVIVITMGVPVEARGSTNLMKVHKLGTGKFFEIF
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PEP- utilizing enzyme family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=488, Percent_Identity=40.3688524590164, Blast_Score=345, Evalue=8e-95, Organism=Homo sapiens, GI33286420, Length=488, Percent_Identity=40.3688524590164, Blast_Score=345, Evalue=8e-95, Organism=Homo sapiens, GI33286418, Length=490, Percent_Identity=41.0204081632653, Blast_Score=340, Evalue=1e-93, Organism=Homo sapiens, GI10835121, Length=490, Percent_Identity=42.0408163265306, Blast_Score=333, Evalue=1e-91, Organism=Homo sapiens, GI32967597, Length=488, Percent_Identity=41.3934426229508, Blast_Score=333, Evalue=2e-91, Organism=Homo sapiens, GI310128732, Length=289, Percent_Identity=40.8304498269896, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI310128730, Length=289, Percent_Identity=40.8304498269896, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI310128736, Length=238, Percent_Identity=35.2941176470588, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI310128734, Length=238, Percent_Identity=35.2941176470588, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI310128738, Length=215, Percent_Identity=34.4186046511628, Blast_Score=133, Evalue=3e-31, Organism=Escherichia coli, GI1787965, Length=470, Percent_Identity=44.0425531914894, Blast_Score=369, Evalue=1e-103, Organism=Escherichia coli, GI1788160, Length=480, Percent_Identity=41.25, Blast_Score=317, Evalue=2e-87, Organism=Caenorhabditis elegans, GI17544584, Length=482, Percent_Identity=41.9087136929461, Blast_Score=358, Evalue=3e-99, Organism=Caenorhabditis elegans, GI71984413, Length=482, Percent_Identity=41.9087136929461, Blast_Score=321, Evalue=6e-88, Organism=Caenorhabditis elegans, GI17506829, Length=482, Percent_Identity=41.9087136929461, Blast_Score=321, Evalue=6e-88, Organism=Caenorhabditis elegans, GI71984406, Length=482, Percent_Identity=41.9087136929461, Blast_Score=320, Evalue=9e-88, Organism=Caenorhabditis elegans, GI17506831, Length=482, Percent_Identity=41.9087136929461, Blast_Score=320, Evalue=1e-87, Organism=Saccharomyces cerevisiae, GI6324923, Length=433, Percent_Identity=41.3394919168591, Blast_Score=299, Evalue=6e-82, Organism=Saccharomyces cerevisiae, GI6319279, Length=483, Percent_Identity=38.7163561076605, Blast_Score=297, Evalue=3e-81, Organism=Drosophila melanogaster, GI24648964, Length=485, Percent_Identity=43.0927835051546, Blast_Score=342, Evalue=3e-94, Organism=Drosophila melanogaster, GI28571814, Length=485, Percent_Identity=43.0927835051546, Blast_Score=342, Evalue=3e-94, Organism=Drosophila melanogaster, GI24648966, Length=410, Percent_Identity=42.6829268292683, Blast_Score=308, Evalue=7e-84, Organism=Drosophila melanogaster, GI24581235, Length=427, Percent_Identity=37.9391100702576, Blast_Score=279, Evalue=3e-75, Organism=Drosophila melanogaster, GI24646914, Length=282, Percent_Identity=40.4255319148936, Blast_Score=198, Evalue=6e-51,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008279 - InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 51840; Mature: 51840
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKSSRKTKIVATLGPASSSPEMISKLMEAGADLFRLNFSHGANDQRRETIATIRRLSAA CCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH RGKEIGILADLQGPKIRTGRMENGAISLRKGDPLDIVTDEVLGTPTLISTIYKALPHDVK CCCCEEEEEECCCCCEECCCCCCCEEEEECCCCCCEEHHHHCCCHHHHHHHHHHCCCCCC PGSRILMDDGLIELKVHSVEGNLVRCTVVEGGTLKDLKGINLPGVHVSAPSLSEKDLRDL CCCEEEEECCEEEEEEEEECCCEEEEEEECCCCHHHCCCCCCCCCEEECCCCCHHHHHHH EFCLAEGVDYIALSFVRSAEDVEGLKRILFERGIHIPVVAKIEKPEALRNFKSILKAADG HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCC VMVARGDLGVEISAEKVPLFQKKIIRACNEAGKPVITATQMLESMISHPRPTRAETSDVA EEEEECCCCEEEECCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCHHHHH NAILDGTDAVMLSGETASGQFPLEAVRTMAKVALDVERYAQMEDTLPQRRHNPSIAEAVA HHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH EAACRAAVTVDARAISVMTQSGSTAALISKFRPPLPIIAFTQSLETRRRLSLYWGVKPLP HHHHHHHEEECCEEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEECCCCCC IGPMTGTDEQIAAVESTFLSAGYRKGDVIVITMGVPVEARGSTNLMKVHKLGTGKFFEIF CCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCEECCCCCCEEEEEECCCCCEEEEC >Mature Secondary Structure MDKSSRKTKIVATLGPASSSPEMISKLMEAGADLFRLNFSHGANDQRRETIATIRRLSAA CCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH RGKEIGILADLQGPKIRTGRMENGAISLRKGDPLDIVTDEVLGTPTLISTIYKALPHDVK CCCCEEEEEECCCCCEECCCCCCCEEEEECCCCCCEEHHHHCCCHHHHHHHHHHCCCCCC PGSRILMDDGLIELKVHSVEGNLVRCTVVEGGTLKDLKGINLPGVHVSAPSLSEKDLRDL CCCEEEEECCEEEEEEEEECCCEEEEEEECCCCHHHCCCCCCCCCEEECCCCCHHHHHHH EFCLAEGVDYIALSFVRSAEDVEGLKRILFERGIHIPVVAKIEKPEALRNFKSILKAADG HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCC VMVARGDLGVEISAEKVPLFQKKIIRACNEAGKPVITATQMLESMISHPRPTRAETSDVA EEEEECCCCEEEECCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCHHHHH NAILDGTDAVMLSGETASGQFPLEAVRTMAKVALDVERYAQMEDTLPQRRHNPSIAEAVA HHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH EAACRAAVTVDARAISVMTQSGSTAALISKFRPPLPIIAFTQSLETRRRLSLYWGVKPLP HHHHHHHEEECCEEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEECCCCCC IGPMTGTDEQIAAVESTFLSAGYRKGDVIVITMGVPVEARGSTNLMKVHKLGTGKFFEIF CCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCEECCCCCCEEEEEECCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8436141; 1447787 [H]