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The map label for this gene is 78221337

Identifier: 78221337

GI number: 78221337

Start: 137064

End: 137792

Strand: Reverse

Name: 78221337

Synonym: Gmet_0110

Alternate gene names: NA

Gene position: 137792-137064 (Counterclockwise)

Preceding gene: 78221338

Following gene: 78221336

Centisome position: 3.45

GC content: 64.47

Gene sequence:

>729_bases
ATGAACAAAGCACTCAGCATCTCAGCCCTCGCGCTTGCCCTTTCGCTCCCCCTCGGTGCCCACGCCTTCGGTCCCGGCGC
GTCCTCCATGGGAGGGGCCACCGCCCCGGCAGGCGTTCCCCTGGCGGGGAAGGTTGCGGAAACCATGGCGAGCGGCGGGT
ACACCTACCTTCTCCTGGAGCGGGACGGGAAGAAGACGTGGGCGGCCATCCCCGAAACCCCCGTGGAGGTGGGCCGAGAG
ATTACCCTCAAGCCGGGGATGGAGATGAAGAACTTCGCCAGTAAAGCCCTCAAGCGCACCTTCGAGAGCATCTATTTCTC
AGAGGGTCTCGCATCGGCTGTGGAAAGCACGGCGGGTAAGAGCTCTCCGGGGAGCAAGGGGGTCGTGGTAGCCCCGGCCG
AACAGGTGAAGGTTGAGAAAGCTGCCAGCCCCAACGCCCACACTATCGCCGAGACCTACGAGCAGAGGGGGAGCCTCGAC
GGAAAACCCGTGGCCGTGCGGGGGAAGGTCATGAGGGTGTCCGCGGGCATCATGGGGAAAAACTGGGTCCACCTCCAGGA
CGGTAGCGGCGATGCCAAGAAGGGAACCAACGACCTGACCGTCACCACCCAGGATCTTCCGGCCGTGGGTGACGTGGTGA
CCGCCACCGGCACCCTCCGCAAGGACAAGGATTTCGGCGGCGGCTACCGGTATCAGGTCATCATCGAGGAAGGGACCGTG
AAGCGCTGA

Upstream 100 bases:

>100_bases
AGGGGGTTGTCTCTTTTTTCTGAAGCGGGTAGTCTGAAATCCACTGATCCCTTCCCCTCCGGTGAAGGGATCGATTACTC
ATTATTGAAGGAGTCCATTG

Downstream 100 bases:

>100_bases
CGCTCTCCTCCTCCATGACCGCCGTCATCATCCTTTTCTACCTCATTACCCTTGGCGCCGGCTTTTTCCTTCGGACGCTG
AATCTCCGCCATCTGAAACG

Product: nucleic acid binding, OB-fold, tRNA/helicase-type

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MNKALSISALALALSLPLGAHAFGPGASSMGGATAPAGVPLAGKVAETMASGGYTYLLLERDGKKTWAAIPETPVEVGRE
ITLKPGMEMKNFASKALKRTFESIYFSEGLASAVESTAGKSSPGSKGVVVAPAEQVKVEKAASPNAHTIAETYEQRGSLD
GKPVAVRGKVMRVSAGIMGKNWVHLQDGSGDAKKGTNDLTVTTQDLPAVGDVVTATGTLRKDKDFGGGYRYQVIIEEGTV
KR

Sequences:

>Translated_242_residues
MNKALSISALALALSLPLGAHAFGPGASSMGGATAPAGVPLAGKVAETMASGGYTYLLLERDGKKTWAAIPETPVEVGRE
ITLKPGMEMKNFASKALKRTFESIYFSEGLASAVESTAGKSSPGSKGVVVAPAEQVKVEKAASPNAHTIAETYEQRGSLD
GKPVAVRGKVMRVSAGIMGKNWVHLQDGSGDAKKGTNDLTVTTQDLPAVGDVVTATGTLRKDKDFGGGYRYQVIIEEGTV
KR
>Mature_242_residues
MNKALSISALALALSLPLGAHAFGPGASSMGGATAPAGVPLAGKVAETMASGGYTYLLLERDGKKTWAAIPETPVEVGRE
ITLKPGMEMKNFASKALKRTFESIYFSEGLASAVESTAGKSSPGSKGVVVAPAEQVKVEKAASPNAHTIAETYEQRGSLD
GKPVAVRGKVMRVSAGIMGKNWVHLQDGSGDAKKGTNDLTVTTQDLPAVGDVVTATGTLRKDKDFGGGYRYQVIIEEGTV
KR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25080; Mature: 25080

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKALSISALALALSLPLGAHAFGPGASSMGGATAPAGVPLAGKVAETMASGGYTYLLLE
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEE
RDGKKTWAAIPETPVEVGREITLKPGMEMKNFASKALKRTFESIYFSEGLASAVESTAGK
CCCCEEEEECCCCHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SSPGSKGVVVAPAEQVKVEKAASPNAHTIAETYEQRGSLDGKPVAVRGKVMRVSAGIMGK
CCCCCCCEEECCHHHHEEHHCCCCCHHHHHHHHHHHCCCCCCEEEEECEEEEEECCCCCC
NWVHLQDGSGDAKKGTNDLTVTTQDLPAVGDVVTATGTLRKDKDFGGGYRYQVIIEEGTV
CEEEEECCCCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCCCCCCCEEEEEEEECCCC
KR
CC
>Mature Secondary Structure
MNKALSISALALALSLPLGAHAFGPGASSMGGATAPAGVPLAGKVAETMASGGYTYLLLE
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEE
RDGKKTWAAIPETPVEVGREITLKPGMEMKNFASKALKRTFESIYFSEGLASAVESTAGK
CCCCEEEEECCCCHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SSPGSKGVVVAPAEQVKVEKAASPNAHTIAETYEQRGSLDGKPVAVRGKVMRVSAGIMGK
CCCCCCCEEECCHHHHEEHHCCCCCHHHHHHHHHHHCCCCCCEEEEECEEEEEECCCCCC
NWVHLQDGSGDAKKGTNDLTVTTQDLPAVGDVVTATGTLRKDKDFGGGYRYQVIIEEGTV
CEEEEECCCCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCCCCCCCEEEEEEEECCCC
KR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA