Click here to switch to the map view.

The map label for this gene is nfrB [C]

Identifier: 78221338

GI number: 78221338

Start: 137916

End: 139028

Strand: Reverse

Name: nfrB [C]

Synonym: Gmet_0111

Alternate gene names: 78221338

Gene position: 139028-137916 (Counterclockwise)

Preceding gene: 78221339

Following gene: 78221337

Centisome position: 3.48

GC content: 63.88

Gene sequence:

>1113_bases
ATGGCGCTTAGACTTGGAGAAATGCTGGTCAAGACAGGCCGGATCACGCCGGACCAGCTTGATGAGGCTTTGAGGAGCCA
GGTCATCTTCGGAGGACGGCTCGGAACGAACCTTGTCGAGATGGGATGCATCGACGAGGAGGAACTGGCGAGGGTCCTGA
GTGAGAAGTTGCGGGTCCCCTGCGTCGACCCGGACGAGCTGATGAACATCTCCCCTGCCATTATAGAGGCGGTGCCGTTG
GAGGTGGTGGAGCAGTACCAGGTGGTCCCCCTCAGACTGGAGAACCGGCGGCTGTTCCTCGTCATGGCCGATCCGTCCGA
TCTTCCCGCCATTGATCAGATAGCCTTCAGGACCGGCCATGTCATCGTGCCGCTGGTGGCCCCGGAGATCAGGCTCCTGA
TGGCCCTCGAAAAGTACTACGGCATCAAGCGGGAGTTGCGGTATCTGCCGGTGTCGAAGGGATTGGGGGGGAGAAGGGTC
TGCAGCTACCAGCCGAAACCCGCTGACGCGGCCATCGCCGCTCCGCGCGAGGTGGTCGACTTTTCGACGCTCCCCGCGGA
GGGGGAGGAATTTTTTCCGTGGGGAGAGGGGGGGTACGACGCTACCCGGATCGAAGCCGCCAAGCGGCACACCATCGACA
CCCTCTCCCGCGAGCTGGTCGATGCCCCTGACCGGGATGCGGTGGCGCGGGCCATCCTGAACTACGTGGGTCAGGAGTTC
GGCCGGGCAGCGCTCCTCCTCGTCACCCGGGATGCCGTGGCGGGGTGGATGGCCCTCGATGGGGGAAACCCGGTCCCCCG
GTTCGACGAACTGAGAATCGGCCTCGACGAGCCGTCAGTAATGCTGTCGGTGACCAAGGCCCGGGTCCTCTACCATGGTC
CCGTGGCCGGTACTCCCGCAAACCTCAGGCTGCTGAAGGCCCTGGGGGGGGACAAGCCCGAGGGGATGATCCTCGTACCC
CTGGTTATGAACAAGCGGGTGGTGGCCATCCTCTGCGCCGTGGGTGGGGTGGAGCTCCTCGGCGCCAGGCAGGAGAGCCT
CCAGGTCGTTGCCCGCAAGGGGGTCCTTGCCTTCGAGGTTCTCATCCTGAAAAACAAGATCCTGATGACGTGA

Upstream 100 bases:

>100_bases
ATGCGCCCGCGGCCCCGCTGGCGCCATTGGCTCACTGATCCGCGGCTCTCTATCATGACGCGTCGCGAAGGCGCTCAGAA
TCAGGAGGTAAACGCACCGT

Downstream 100 bases:

>100_bases
CGGAAAAAGGCGCCCCCTGAAGAAGGGGGTTGTCTCTTTTTTCTGAAGCGGGTAGTCTGAAATCCACTGATCCCTTCCCC
TCCGGTGAAGGGATCGATTA

Product: general secretory system II, protein E-like

Products: NA

Alternate protein names: General Secretion Pathway Protein E; General Secretory System II Protein E Domain Protein; General Secretory Pathway Protein E; Type IV-A Pilus Assembly ATPase PilB; Type IV Pilus Assembly Protein PilB; Type IV Pilus Biogenesis Protein PilB; MSHA Biogenesis Protein MshE; GspIIEN Domain-Containing Protein; Pili Biogenesis Protein PilB-Like ATPase; General Secretory System II Protein E; Response Regulator; Type Iv-A Pilus Assembly ATPase Pilb; General Secretory System II Protein E-Like; Response Regulator Receiver Protein; Type II Secretory Pathway Protein; Type II Secretory Pathway ATPase PulE/Tfp Pilus Assembly; Type IV Pilus Assembly Protein TapB; Type IV Fimbrial Assembly Protein PilB; ATPase; Response Regulator Receiver Domain-Containing Protein; General Secretion Protein E; Type IV Pilus Assembly Protein PilF; GspIIEN Domain-Containing Response Regulator; Mannose-Sensitive Agglutinin; Secretion System Protein E; Serine/Threonine Kinase; Tfp Pilus Assembly Protein PilB; General Secretory System II Protein E-Like Protein; Type II Secretory Pathway ATPase; Type IV Pilus Biogenesis ATPase PilB; General Secretory System II

Number of amino acids: Translated: 370; Mature: 369

Protein sequence:

>370_residues
MALRLGEMLVKTGRITPDQLDEALRSQVIFGGRLGTNLVEMGCIDEEELARVLSEKLRVPCVDPDELMNISPAIIEAVPL
EVVEQYQVVPLRLENRRLFLVMADPSDLPAIDQIAFRTGHVIVPLVAPEIRLLMALEKYYGIKRELRYLPVSKGLGGRRV
CSYQPKPADAAIAAPREVVDFSTLPAEGEEFFPWGEGGYDATRIEAAKRHTIDTLSRELVDAPDRDAVARAILNYVGQEF
GRAALLLVTRDAVAGWMALDGGNPVPRFDELRIGLDEPSVMLSVTKARVLYHGPVAGTPANLRLLKALGGDKPEGMILVP
LVMNKRVVAILCAVGGVELLGARQESLQVVARKGVLAFEVLILKNKILMT

Sequences:

>Translated_370_residues
MALRLGEMLVKTGRITPDQLDEALRSQVIFGGRLGTNLVEMGCIDEEELARVLSEKLRVPCVDPDELMNISPAIIEAVPL
EVVEQYQVVPLRLENRRLFLVMADPSDLPAIDQIAFRTGHVIVPLVAPEIRLLMALEKYYGIKRELRYLPVSKGLGGRRV
CSYQPKPADAAIAAPREVVDFSTLPAEGEEFFPWGEGGYDATRIEAAKRHTIDTLSRELVDAPDRDAVARAILNYVGQEF
GRAALLLVTRDAVAGWMALDGGNPVPRFDELRIGLDEPSVMLSVTKARVLYHGPVAGTPANLRLLKALGGDKPEGMILVP
LVMNKRVVAILCAVGGVELLGARQESLQVVARKGVLAFEVLILKNKILMT
>Mature_369_residues
ALRLGEMLVKTGRITPDQLDEALRSQVIFGGRLGTNLVEMGCIDEEELARVLSEKLRVPCVDPDELMNISPAIIEAVPLE
VVEQYQVVPLRLENRRLFLVMADPSDLPAIDQIAFRTGHVIVPLVAPEIRLLMALEKYYGIKRELRYLPVSKGLGGRRVC
SYQPKPADAAIAAPREVVDFSTLPAEGEEFFPWGEGGYDATRIEAAKRHTIDTLSRELVDAPDRDAVARAILNYVGQEFG
RAALLLVTRDAVAGWMALDGGNPVPRFDELRIGLDEPSVMLSVTKARVLYHGPVAGTPANLRLLKALGGDKPEGMILVPL
VMNKRVVAILCAVGGVELLGARQESLQVVARKGVLAFEVLILKNKILMT

Specific function: Required For Bacteriophage N4 Adsorption. May Be A Component Of The Phage Receptor. [C]

COG id: COG2804

COG function: function code NU; Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786781, Length=140, Percent_Identity=31.4285714285714, Blast_Score=62, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40511; Mature: 40380

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALRLGEMLVKTGRITPDQLDEALRSQVIFGGRLGTNLVEMGCIDEEELARVLSEKLRVP
CCCCHHHHHHHCCCCCHHHHHHHHHHHEEECCCCCCCHHHHCCCCHHHHHHHHHHHCCCC
CVDPDELMNISPAIIEAVPLEVVEQYQVVPLRLENRRLFLVMADPSDLPAIDQIAFRTGH
CCCHHHHHCCCHHHHHHHHHHHHHCCEEEEEEECCCEEEEEEECCCCCCHHHHHHHHCCC
VIVPLVAPEIRLLMALEKYYGIKRELRYLPVSKGLGGRRVCSYQPKPADAAIAAPREVVD
EEEEECCHHHHHHHHHHHHHCHHHHHHEECCCCCCCCCEEECCCCCCCCCHHCCCHHHHC
FSTLPAEGEEFFPWGEGGYDATRIEAAKRHTIDTLSRELVDAPDRDAVARAILNYVGQEF
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
GRAALLLVTRDAVAGWMALDGGNPVPRFDELRIGLDEPSVMLSVTKARVLYHGPVAGTPA
CCEEEEEEEHHHHHCEEEECCCCCCCCHHHEEECCCCCCEEEEEEEEEEEEECCCCCCCH
NLRLLKALGGDKPEGMILVPLVMNKRVVAILCAVGGVELLGARQESLQVVARKGVLAFEV
HHHHHHHHCCCCCCCEEEEEEHHCCHHHHHHHHHCCHHHHCCCHHHHHHHHHCCHHHHHH
LILKNKILMT
HHHHCHHCCC
>Mature Secondary Structure 
ALRLGEMLVKTGRITPDQLDEALRSQVIFGGRLGTNLVEMGCIDEEELARVLSEKLRVP
CCCHHHHHHHCCCCCHHHHHHHHHHHEEECCCCCCCHHHHCCCCHHHHHHHHHHHCCCC
CVDPDELMNISPAIIEAVPLEVVEQYQVVPLRLENRRLFLVMADPSDLPAIDQIAFRTGH
CCCHHHHHCCCHHHHHHHHHHHHHCCEEEEEEECCCEEEEEEECCCCCCHHHHHHHHCCC
VIVPLVAPEIRLLMALEKYYGIKRELRYLPVSKGLGGRRVCSYQPKPADAAIAAPREVVD
EEEEECCHHHHHHHHHHHHHCHHHHHHEECCCCCCCCCEEECCCCCCCCCHHCCCHHHHC
FSTLPAEGEEFFPWGEGGYDATRIEAAKRHTIDTLSRELVDAPDRDAVARAILNYVGQEF
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
GRAALLLVTRDAVAGWMALDGGNPVPRFDELRIGLDEPSVMLSVTKARVLYHGPVAGTPA
CCEEEEEEEHHHHHCEEEECCCCCCCCHHHEEECCCCCCEEEEEEEEEEEEECCCCCCCH
NLRLLKALGGDKPEGMILVPLVMNKRVVAILCAVGGVELLGARQESLQVVARKGVLAFEV
HHHHHHHHCCCCCCCEEEEEEHHCCHHHHHHHHHCCHHHHCCCHHHHHHHHHCCHHHHHH
LILKNKILMT
HHHHCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA