| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221314
Identifier: 78221314
GI number: 78221314
Start: 109309
End: 110313
Strand: Reverse
Name: 78221314
Synonym: Gmet_0087
Alternate gene names: NA
Gene position: 110313-109309 (Counterclockwise)
Preceding gene: 78221316
Following gene: 78221313
Centisome position: 2.76
GC content: 67.36
Gene sequence:
>1005_bases ATGACCGTCATCGACATTCACTGCCATGCCGCCGGCATCGGCGCCGGTGACAGCGGCTGCTTCATCTCCCCGAAGCTTCG CCGGAGCTGGAAGTACCGCTTCTACCTCAAATCCTTCGGCGTGACCAATGCGGACTTGGAGCGGGAGGGTGATAGCCTGG TGCTCCGGCGTATTTCGGAGCGGCTCACCGCTTCGTCCCAGGTCCAGCAGGCCGTGGTGCTGGCCATGGATGGCGTGGTG GACGGCAGCGGCCAGTTGGATCGGGACCGGACCGAGATGTACATTCCCAATGAGTTCCTGGCCCGGGAGTGCCGCCGCTA CCCGAACCTCCTCTTCGGCGCCAGCGTCAACCCCCAGCGCCCCGACGCCTTGGAGCGCCTCGACGCCGCTGCCGCCGCCG GAGCGGTGCTCGTGAAGTGGCTCCCCTCCATCCAGGGGACCGACCCTGCGGATCGGTGCCTCGTTCCCTTCTATCGCCAC CTGGCCCAGCTGGGGCTTCCGCTTCTGACCCACACCGGCCTTGAGGAGTCATTCACCCTGGCCGACAACGCCCTGGCCGA CCCGGCGCGTCTCCGGCTCCCCCTGGAAGAGGGGGTGACTGTCATTGCCGCCCACTGCGCCACCAGCGGACAAAGCCACG GGGAGTCGAACCTGGCGCGCCTCCTTCCACTCTTTGCCCAATTCCCGAACCTCTACGCCGACATCTCGGCCCTCACCCAG CTGAACCGACTGGGGCACCTGGAGCGGGTCCTGGCGCACCGGGACATTCACGGCCGGCTCCTCTACGGCACCGACATGCC CCTGCCTGCCACGGGGCTCACCTCCCCCTGGTTCCACCTCCTCCGGCTCGGGCCGCTGGAGGCCCGGCGGTTGGCCGTCA TCGGTAACCCCTGGGATCAGGATGTGGCCCTGAAGCTGGCCCTGGGGATGCCAGAGGAGATCCTGTTCCGGGCCGCAGGC GTACTCGGGATCGCTGACACCATCAAACACCGGAGCTTCCCATGA
Upstream 100 bases:
>100_bases TTGCCCTATTGTTGATGAGCGCCGTTGCCGCCGCCCCGGTCTTCACTGCCATGACCGTAAAGACCATCACCGACTGCCGC ATGAACCACCGGAGCCGGAA
Downstream 100 bases:
>100_bases ATACCACCGAACCGACCACCCTACCCGTCTCCTTCCGCCGCCTGAACCTGGCCCAGGCCCTGGGGGCGCTGAACGACAAC CTCATCAAACTGATCATCGT
Product: amidohydrolase 2
Products: NA
Alternate protein names: Metal-Dependent Hydrolase Superfamily Protein; Amidohydrolase
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MTVIDIHCHAAGIGAGDSGCFISPKLRRSWKYRFYLKSFGVTNADLEREGDSLVLRRISERLTASSQVQQAVVLAMDGVV DGSGQLDRDRTEMYIPNEFLARECRRYPNLLFGASVNPQRPDALERLDAAAAAGAVLVKWLPSIQGTDPADRCLVPFYRH LAQLGLPLLTHTGLEESFTLADNALADPARLRLPLEEGVTVIAAHCATSGQSHGESNLARLLPLFAQFPNLYADISALTQ LNRLGHLERVLAHRDIHGRLLYGTDMPLPATGLTSPWFHLLRLGPLEARRLAVIGNPWDQDVALKLALGMPEEILFRAAG VLGIADTIKHRSFP
Sequences:
>Translated_334_residues MTVIDIHCHAAGIGAGDSGCFISPKLRRSWKYRFYLKSFGVTNADLEREGDSLVLRRISERLTASSQVQQAVVLAMDGVV DGSGQLDRDRTEMYIPNEFLARECRRYPNLLFGASVNPQRPDALERLDAAAAAGAVLVKWLPSIQGTDPADRCLVPFYRH LAQLGLPLLTHTGLEESFTLADNALADPARLRLPLEEGVTVIAAHCATSGQSHGESNLARLLPLFAQFPNLYADISALTQ LNRLGHLERVLAHRDIHGRLLYGTDMPLPATGLTSPWFHLLRLGPLEARRLAVIGNPWDQDVALKLALGMPEEILFRAAG VLGIADTIKHRSFP >Mature_333_residues TVIDIHCHAAGIGAGDSGCFISPKLRRSWKYRFYLKSFGVTNADLEREGDSLVLRRISERLTASSQVQQAVVLAMDGVVD GSGQLDRDRTEMYIPNEFLARECRRYPNLLFGASVNPQRPDALERLDAAAAAGAVLVKWLPSIQGTDPADRCLVPFYRHL AQLGLPLLTHTGLEESFTLADNALADPARLRLPLEEGVTVIAAHCATSGQSHGESNLARLLPLFAQFPNLYADISALTQL NRLGHLERVLAHRDIHGRLLYGTDMPLPATGLTSPWFHLLRLGPLEARRLAVIGNPWDQDVALKLALGMPEEILFRAAGV LGIADTIKHRSFP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36649; Mature: 36517
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVIDIHCHAAGIGAGDSGCFISPKLRRSWKYRFYLKSFGVTNADLEREGDSLVLRRISE CEEEEEEEEEECCCCCCCCCEECHHHHHCCEEEEEEECCCCCCCHHHCCCHHHHHHHHHH RLTASSQVQQAVVLAMDGVVDGSGQLDRDRTEMYIPNEFLARECRRYPNLLFGASVNPQR HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCHHHHHHHHHHCCCEEECCCCCCCC PDALERLDAAAAAGAVLVKWLPSIQGTDPADRCLVPFYRHLAQLGLPLLTHTGLEESFTL CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHH ADNALADPARLRLPLEEGVTVIAAHCATSGQSHGESNLARLLPLFAQFPNLYADISALTQ CCCCCCCHHHEECCHHHCCEEEEEHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH LNRLGHLERVLAHRDIHGRLLYGTDMPLPATGLTSPWFHLLRLGPLEARRLAVIGNPWDQ HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCC DVALKLALGMPEEILFRAAGVLGIADTIKHRSFP CCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TVIDIHCHAAGIGAGDSGCFISPKLRRSWKYRFYLKSFGVTNADLEREGDSLVLRRISE EEEEEEEEEECCCCCCCCCEECHHHHHCCEEEEEEECCCCCCCHHHCCCHHHHHHHHHH RLTASSQVQQAVVLAMDGVVDGSGQLDRDRTEMYIPNEFLARECRRYPNLLFGASVNPQR HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCHHHHHHHHHHCCCEEECCCCCCCC PDALERLDAAAAAGAVLVKWLPSIQGTDPADRCLVPFYRHLAQLGLPLLTHTGLEESFTL CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHH ADNALADPARLRLPLEEGVTVIAAHCATSGQSHGESNLARLLPLFAQFPNLYADISALTQ CCCCCCCHHHEECCHHHCCEEEEEHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHH LNRLGHLERVLAHRDIHGRLLYGTDMPLPATGLTSPWFHLLRLGPLEARRLAVIGNPWDQ HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCC DVALKLALGMPEEILFRAAGVLGIADTIKHRSFP CCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA