| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221310
Identifier: 78221310
GI number: 78221310
Start: 101105
End: 103597
Strand: Reverse
Name: 78221310
Synonym: Gmet_0083
Alternate gene names: NA
Gene position: 103597-101105 (Counterclockwise)
Preceding gene: 78221311
Following gene: 78221309
Centisome position: 2.59
GC content: 63.38
Gene sequence:
>2493_bases ATGTTATTAAATGTCGTTCTTGACCACTGGGGGTACTTTGCCGCACTGGTGCCCATTGCCGTCCTCCTCTATGCCTCAAT CGTCATTGTCGGCGGTAACGAAATCGCCCTCATCGAGCGGCGCTGGTTCGGGAGCAAGATGCCCCAGGGACGTGTCGTGG CCCTGGGGAACGAGGTGGGCATCCAGGCCCGCACCCTCGGCCCGGGGCTCCATTTCCTCATCCCCTTCATCTACAAGGCG ACCAAGAGCGTTTTCACGGAAATCCTCGACAACGAGATCGGCCTCATCGAATCGGTGGACGGCAACGCCATTCCGGCGGG GCGGATTTTCGCCGAGGTGGTAACCGGTCACAACTCCTTCCAGGACGGCGAGGCCTTCATCAAAAACGGCGGCCAGAAGG GGCCCCAGATCGAGGTGCTCCCTCCGGGGAAATACCGGATCAACCCCTACCTCTTCAAGCTGACCAAGGGGACTGTCACC GAGATCAAGGACACGGAAATCGGCATCGTCGAGTCGGTGGATGGCGCCGCCATCCCCGAGGGTAAAATCTTCGCCAGGGC GGTGGAGGGGCACGCCTCCTTCCAAAACGGCGAGGCGTTCATCAAGAACGGCGGCCAGAAGGGGCCCCAGATCGAGATCA TCCCGCCGGGCAACTACCGGATCAACCCCTACCTCTTCAAGGTCACCAAGAGCCTCGCCACCAAGATCAGCGAAGGGGAG ATCGGCATGGTGGAGTCGTCGGACGGCTCGGCCATCCCCGCGGGGCGGATCTTCGCCAACGTGGTGCCGGGGCACAACTC CTTTCAGGACGGCGAGGCATTCATCAAGAACGGCGGCCAGAAGGGACCCCAGATCGAAATCCTGCCGCCGGGGGTCTACC GGATCCATCCCAATCTCTTCCGCATCATGAAGGCGGCGGCGGTGGTCATCGCCAAGGGTGAGGTGGGGATGGTCACGGCC CAGGACGGCGAACCGATCCCAATGGGGCGGCTCCTGGCCCAGAGCGTGCCGGAGCACTCCAACTTCGAGAACGGCGAGGC ATTCCTGAAAAACGGCGGCCAGAAGGGGCCCCAGATCGACGTGCTCCTCCCCGGTACCTACCGGATCAACCTGAACCTGT TCCAGATCCAGATCGCCCCGGCGGCGGTCGTGGAGGCCAACAAGATCGGTCTGGTCACCGCCCTGGACGGCATCCCCCTG CCGGAGCGGGAGTATGTCGCCTCCCCCATCACCGGCCACAACGACTACCAGGACGGCTCCGCCTTCCTCACCAAGAGCGG CCAGCGGGGACCGCAGCTCGACGTCCTTCGCCCCGGCACCTACTACATCAACCCCCTCATGTTCAGCGTCGCCATTGACG ATGTGGCCGTGGTGGAGCGGGGCCAGGTGGGGGTCATCGTCTCCAACGTGGGGGATGACCCGACGGAGGAGATGAAGAAG CGGCTCGGCTCATCCCAGACCGGCGCCTCCATCGAGGAGGGGAAAGAGAAGTACGTGGTCCCCAAGGGGTTCCGGGGGAT CCAGGAGGAGGTGGCCGGACCCGGCCGTTACTACCTGAACCGCCGGGCCTTCATGTGCTACATCATCGACACCACCAACA TCACCATCGACTGGGACGACCAGGAGGACACCCGTTTCGACCAGCTCACCGTCATCTCCAAGGACGGCTTCCCCATCCAG GTGGCGGTTAAGGTGGTCATCCGCGTCCGGCCCGACCAGGCCCCCTACATGGTGGCAAAGGTGGGATCCATCGACAACCT GATCCAGCACGTCATCCACCCCATGATCGACTCCTCCTTCCGCAACCAGGCCTCTACCGCCTCGGCCATGAACTTCCTCC AGAGCCGCTCCGAAGAGCAGTCCAAAGCCGAGAGCCGTGCCCGCATCGACCTGGAGAGGTACCATGTGGAGTGTGTCTCC GTACTCATATGCCAGATCAAGCTCCCCGAAGACCTGATGGAGACCCAGACCAAGCGGATCATCGCCGAGCAGCAGCAGGA GATGTACAAGATGGAGCAGCGCTCCCAGGCCGAGCGGACCGAGATGGAGAAGATGCGGGCCACCGCCGACCAGCAGCCTA CCCTCGTGGCGTCTGAGATCGCCGTGAAGGTGGCCACCCAGAAGAAGGCCGAGATGATCACCCTGGCCGAAGGTACCGCC GAAGCCCAGGCCCTGGAAGGGACCGGCGAAGGGAAGCGGCTGAAGGCCATCGGCGACGGCGAGGCGTCAAAGATCGCCGC CATCGGCGACGCCACCGCCCAGGCCTACTCGAAACAGAAAGAGGCCATCGGCGAAGACGCCATCAAGCAGATCAAGATCG TCGAACTGATCTCCGCCGCCATCGAAAACGGCCAGATCAAGATCGTCCCCGATGTGCTCGTCTCCGGCGGCGGCACAGCC GGCGACGGGCTCATGGGGCAGTTGACCCGGCTGCTGCCGGGGGTGGATTTGAATGCGTTGATGGCGAAGGGGGGGAAGCA GCCTCAGGCGTGA
Upstream 100 bases:
>100_bases GGCGGAGCTGATGCGGGTGCGGGAGTAGCGTGCCCATTAAAACAGTCCTAGGGGCATTGCCCCCCATCCCTCTCACATCC GCACCACGAAAGGAATCCGA
Downstream 100 bases:
>100_bases GGCGGGAAATCCTGTTACGGGAGAAATGTTCTGTTTGGGGGGATGAGCGGTTCATGCGCGCGTGCGCGTGAACCGCTCAA TAATTATGTTGAACAGAGGA
Product: Band 7 protein
Products: NA
Alternate protein names: Von Willebrand Factor Type A
Number of amino acids: Translated: 830; Mature: 830
Protein sequence:
>830_residues MLLNVVLDHWGYFAALVPIAVLLYASIVIVGGNEIALIERRWFGSKMPQGRVVALGNEVGIQARTLGPGLHFLIPFIYKA TKSVFTEILDNEIGLIESVDGNAIPAGRIFAEVVTGHNSFQDGEAFIKNGGQKGPQIEVLPPGKYRINPYLFKLTKGTVT EIKDTEIGIVESVDGAAIPEGKIFARAVEGHASFQNGEAFIKNGGQKGPQIEIIPPGNYRINPYLFKVTKSLATKISEGE IGMVESSDGSAIPAGRIFANVVPGHNSFQDGEAFIKNGGQKGPQIEILPPGVYRIHPNLFRIMKAAAVVIAKGEVGMVTA QDGEPIPMGRLLAQSVPEHSNFENGEAFLKNGGQKGPQIDVLLPGTYRINLNLFQIQIAPAAVVEANKIGLVTALDGIPL PEREYVASPITGHNDYQDGSAFLTKSGQRGPQLDVLRPGTYYINPLMFSVAIDDVAVVERGQVGVIVSNVGDDPTEEMKK RLGSSQTGASIEEGKEKYVVPKGFRGIQEEVAGPGRYYLNRRAFMCYIIDTTNITIDWDDQEDTRFDQLTVISKDGFPIQ VAVKVVIRVRPDQAPYMVAKVGSIDNLIQHVIHPMIDSSFRNQASTASAMNFLQSRSEEQSKAESRARIDLERYHVECVS VLICQIKLPEDLMETQTKRIIAEQQQEMYKMEQRSQAERTEMEKMRATADQQPTLVASEIAVKVATQKKAEMITLAEGTA EAQALEGTGEGKRLKAIGDGEASKIAAIGDATAQAYSKQKEAIGEDAIKQIKIVELISAAIENGQIKIVPDVLVSGGGTA GDGLMGQLTRLLPGVDLNALMAKGGKQPQA
Sequences:
>Translated_830_residues MLLNVVLDHWGYFAALVPIAVLLYASIVIVGGNEIALIERRWFGSKMPQGRVVALGNEVGIQARTLGPGLHFLIPFIYKA TKSVFTEILDNEIGLIESVDGNAIPAGRIFAEVVTGHNSFQDGEAFIKNGGQKGPQIEVLPPGKYRINPYLFKLTKGTVT EIKDTEIGIVESVDGAAIPEGKIFARAVEGHASFQNGEAFIKNGGQKGPQIEIIPPGNYRINPYLFKVTKSLATKISEGE IGMVESSDGSAIPAGRIFANVVPGHNSFQDGEAFIKNGGQKGPQIEILPPGVYRIHPNLFRIMKAAAVVIAKGEVGMVTA QDGEPIPMGRLLAQSVPEHSNFENGEAFLKNGGQKGPQIDVLLPGTYRINLNLFQIQIAPAAVVEANKIGLVTALDGIPL PEREYVASPITGHNDYQDGSAFLTKSGQRGPQLDVLRPGTYYINPLMFSVAIDDVAVVERGQVGVIVSNVGDDPTEEMKK RLGSSQTGASIEEGKEKYVVPKGFRGIQEEVAGPGRYYLNRRAFMCYIIDTTNITIDWDDQEDTRFDQLTVISKDGFPIQ VAVKVVIRVRPDQAPYMVAKVGSIDNLIQHVIHPMIDSSFRNQASTASAMNFLQSRSEEQSKAESRARIDLERYHVECVS VLICQIKLPEDLMETQTKRIIAEQQQEMYKMEQRSQAERTEMEKMRATADQQPTLVASEIAVKVATQKKAEMITLAEGTA EAQALEGTGEGKRLKAIGDGEASKIAAIGDATAQAYSKQKEAIGEDAIKQIKIVELISAAIENGQIKIVPDVLVSGGGTA GDGLMGQLTRLLPGVDLNALMAKGGKQPQA >Mature_830_residues MLLNVVLDHWGYFAALVPIAVLLYASIVIVGGNEIALIERRWFGSKMPQGRVVALGNEVGIQARTLGPGLHFLIPFIYKA TKSVFTEILDNEIGLIESVDGNAIPAGRIFAEVVTGHNSFQDGEAFIKNGGQKGPQIEVLPPGKYRINPYLFKLTKGTVT EIKDTEIGIVESVDGAAIPEGKIFARAVEGHASFQNGEAFIKNGGQKGPQIEIIPPGNYRINPYLFKVTKSLATKISEGE IGMVESSDGSAIPAGRIFANVVPGHNSFQDGEAFIKNGGQKGPQIEILPPGVYRIHPNLFRIMKAAAVVIAKGEVGMVTA QDGEPIPMGRLLAQSVPEHSNFENGEAFLKNGGQKGPQIDVLLPGTYRINLNLFQIQIAPAAVVEANKIGLVTALDGIPL PEREYVASPITGHNDYQDGSAFLTKSGQRGPQLDVLRPGTYYINPLMFSVAIDDVAVVERGQVGVIVSNVGDDPTEEMKK RLGSSQTGASIEEGKEKYVVPKGFRGIQEEVAGPGRYYLNRRAFMCYIIDTTNITIDWDDQEDTRFDQLTVISKDGFPIQ VAVKVVIRVRPDQAPYMVAKVGSIDNLIQHVIHPMIDSSFRNQASTASAMNFLQSRSEEQSKAESRARIDLERYHVECVS VLICQIKLPEDLMETQTKRIIAEQQQEMYKMEQRSQAERTEMEKMRATADQQPTLVASEIAVKVATQKKAEMITLAEGTA EAQALEGTGEGKRLKAIGDGEASKIAAIGDATAQAYSKQKEAIGEDAIKQIKIVELISAAIENGQIKIVPDVLVSGGGTA GDGLMGQLTRLLPGVDLNALMAKGGKQPQA
Specific function: Unknown
COG id: COG2268
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89819; Mature: 89819
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLNVVLDHWGYFAALVPIAVLLYASIVIVGGNEIALIERRWFGSKMPQGRVVALGNEVG CEEEEEHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEEEHHCCCCCCCCCEEEECCCCC IQARTLGPGLHFLIPFIYKATKSVFTEILDNEIGLIESVDGNAIPAGRIFAEVVTGHNSF EEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCCC QDGEAFIKNGGQKGPQIEVLPPGKYRINPYLFKLTKGTVTEIKDTEIGIVESVDGAAIPE CCCHHHHHCCCCCCCEEEEECCCCEEECEEEEEEECCCEEEECCCCCCEEECCCCCCCCC GKIFARAVEGHASFQNGEAFIKNGGQKGPQIEIIPPGNYRINPYLFKVTKSLATKISEGE CCEEEEEHHCCCCCCCCCHHHHCCCCCCCEEEEECCCCEEECHHHHHHHHHHHHHCCCCC IGMVESSDGSAIPAGRIFANVVPGHNSFQDGEAFIKNGGQKGPQIEILPPGVYRIHPNLF EEEEECCCCCCCCCCHHEEEECCCCCCCCCCHHHHHCCCCCCCEEEEECCCCEEECHHHH RIMKAAAVVIAKGEVGMVTAQDGEPIPMGRLLAQSVPEHSNFENGEAFLKNGGQKGPQID HHHHHHEEEEECCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCEEE VLLPGTYRINLNLFQIQIAPAAVVEANKIGLVTALDGIPLPEREYVASPITGHNDYQDGS EEECCEEEEEEEEEEEEECCCEEEECCCCEEEEEECCCCCCCHHHHCCCCCCCCCCCCCC AFLTKSGQRGPQLDVLRPGTYYINPLMFSVAIDDVAVVERGQVGVIVSNVGDDPTEEMKK CCEECCCCCCCCEEEECCCCEEECCEEEEEECCCEEEEECCCEEEEEECCCCCCHHHHHH RLGSSQTGASIEEGKEKYVVPKGFRGIQEEVAGPGRYYLNRRAFMCYIIDTTNITIDWDD HCCCCCCCCCHHCCCCEEECCCCCCCHHHHHCCCCCEEECCCEEEEEEEECCEEEEEECC QEDTRFDQLTVISKDGFPIQVAVKVVIRVRPDQAPYMVAKVGSIDNLIQHVIHPMIDSSF CCCCCCCEEEEEECCCCCEEEEEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHH RNQASTASAMNFLQSRSEEQSKAESRARIDLERYHVECVSVLICQIKLPEDLMETQTKRI HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHH IAEQQQEMYKMEQRSQAERTEMEKMRATADQQPTLVASEIAVKVATQKKAEMITLAEGTA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHEEEECCCCCEEEEEECCCC EAQALEGTGEGKRLKAIGDGEASKIAAIGDATAQAYSKQKEAIGEDAIKQIKIVELISAA HHHHCCCCCCCCEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IENGQIKIVPDVLVSGGGTAGDGLMGQLTRLLPGVDLNALMAKGGKQPQA HCCCCEEEECHHEECCCCCCCCCHHHHHHHHCCCCCHHHHHHCCCCCCCC >Mature Secondary Structure MLLNVVLDHWGYFAALVPIAVLLYASIVIVGGNEIALIERRWFGSKMPQGRVVALGNEVG CEEEEEHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEEEHHCCCCCCCCCEEEECCCCC IQARTLGPGLHFLIPFIYKATKSVFTEILDNEIGLIESVDGNAIPAGRIFAEVVTGHNSF EEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCCC QDGEAFIKNGGQKGPQIEVLPPGKYRINPYLFKLTKGTVTEIKDTEIGIVESVDGAAIPE CCCHHHHHCCCCCCCEEEEECCCCEEECEEEEEEECCCEEEECCCCCCEEECCCCCCCCC GKIFARAVEGHASFQNGEAFIKNGGQKGPQIEIIPPGNYRINPYLFKVTKSLATKISEGE CCEEEEEHHCCCCCCCCCHHHHCCCCCCCEEEEECCCCEEECHHHHHHHHHHHHHCCCCC IGMVESSDGSAIPAGRIFANVVPGHNSFQDGEAFIKNGGQKGPQIEILPPGVYRIHPNLF EEEEECCCCCCCCCCHHEEEECCCCCCCCCCHHHHHCCCCCCCEEEEECCCCEEECHHHH RIMKAAAVVIAKGEVGMVTAQDGEPIPMGRLLAQSVPEHSNFENGEAFLKNGGQKGPQID HHHHHHEEEEECCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCEEE VLLPGTYRINLNLFQIQIAPAAVVEANKIGLVTALDGIPLPEREYVASPITGHNDYQDGS EEECCEEEEEEEEEEEEECCCEEEECCCCEEEEEECCCCCCCHHHHCCCCCCCCCCCCCC AFLTKSGQRGPQLDVLRPGTYYINPLMFSVAIDDVAVVERGQVGVIVSNVGDDPTEEMKK CCEECCCCCCCCEEEECCCCEEECCEEEEEECCCEEEEECCCEEEEEECCCCCCHHHHHH RLGSSQTGASIEEGKEKYVVPKGFRGIQEEVAGPGRYYLNRRAFMCYIIDTTNITIDWDD HCCCCCCCCCHHCCCCEEECCCCCCCHHHHHCCCCCEEECCCEEEEEEEECCEEEEEECC QEDTRFDQLTVISKDGFPIQVAVKVVIRVRPDQAPYMVAKVGSIDNLIQHVIHPMIDSSF CCCCCCCEEEEEECCCCCEEEEEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHH RNQASTASAMNFLQSRSEEQSKAESRARIDLERYHVECVSVLICQIKLPEDLMETQTKRI HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHH IAEQQQEMYKMEQRSQAERTEMEKMRATADQQPTLVASEIAVKVATQKKAEMITLAEGTA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHEEEECCCCCEEEEEECCCC EAQALEGTGEGKRLKAIGDGEASKIAAIGDATAQAYSKQKEAIGEDAIKQIKIVELISAA HHHHCCCCCCCCEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IENGQIKIVPDVLVSGGGTAGDGLMGQLTRLLPGVDLNALMAKGGKQPQA HCCCCEEEECHHEECCCCCCCCCHHHHHHHHCCCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA