| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221311
Identifier: 78221311
GI number: 78221311
Start: 103670
End: 105166
Strand: Reverse
Name: 78221311
Synonym: Gmet_0084
Alternate gene names: NA
Gene position: 105166-103670 (Counterclockwise)
Preceding gene: 78221312
Following gene: 78221310
Centisome position: 2.63
GC content: 65.2
Gene sequence:
>1497_bases ATGAGGCGCATCACCGTTGCCGTGCTGCTCATGGCTGCCCTCCTCTCACCCTTCACAGCCCTGGCCCAGCGCCAGGCGGC CTGCCGCGAGCACCTTGCCGCGGCCCACAGCGGTGGCCGGGCGGCGGTGAACCAATCCCTCGCCAAGGAAATGACTGCTT TCCGGACCCTGGCGGAACGGGCCCTGGCACTCCGGGCCGAGACCATCAAGGTGGGAAATTCTGTCCACGCCAAAGTGGAC CAGGGCAAACCCCTTACCGGCGATGACATCGCACTTCTCAACCAGGGGATCACCGAGCACCTGACCCTGCGGGACGAGAT GCTGGCCGTGGCCGAGAGCCACGAATGCTGGCTCGATGCCTCGACCGCCGAACTCAGCAAGGCCGGCATCACCGATGAGG CCCGTCTCAAGGGGGTGATGGTATCCCTGGCCTCGGCCCTGGTCCTCTATGACAACTACCTCCTTGCGGTCTCCCTCTTT GAGGGGGACGCCAAGCTGCGCCGCATCCTCAATGAAAAAGATCCCGGCTATGCCGTGACCCGCGCCGCCCTCTCGAAGGT CACCCTCAACTACAACTCCATCGCCAACCGGCAGCGGGTCCGGCGGGCCATCTCGTTCTTCGAGAGCGAATCAAAGAAGC ACCCGGCCCTCCTCCGCGACGGCGCGGAAACCTCCTACCTCGCCACCCTCATCGCCCAGAGCCCCTCGTACACCATGGTC GAGAAGGTATCGCCCCTCTACGTTATCGGCCGCAAGCTGGGCTTCCTGGGGGCCGCCACCACCGACACCCTCACCGTAAT GGAGCGGGAAGGGGTCAACGTCTTCAGCATGCTCTTCGGCAACGCGGTGGGGCTGGTGGAGACCCGCAAGGGGAAGCTGG CCCTGCGGGGCGACGTGGCGCATGATGTTTCGGCAACCCTCAGGTCCGGCGACATCCTCCTGGAGAAGACCCCCTTCCGG CTCACCGACAAGCTCATTCCCGGTTACTGGGGTCATGCGGCGGTCTGGATCGGCAGCGAGGCGGAGCTGAAGGAGCTGGG GATCTGGGACAATCCCGTGGTGGCCCGCCACCACGGGGAGATCCGTGAGGGACGGCTCGTGGTGGAGGCCCTCCGTTCCG GGGTGGAGATGAACACACTGGAACACTTCATGAACGTGGACAGCCTCGGCATCCTGCGCAAGGCCGCCGCCGGCCGGGAC GAGCGGGGGCGGATCATCATCCAGGCCCTGCGCCAGGTGGGCAAGCCCTACGACTTCAACTTCGACGTGGAATCCAAGGA GCGGGTCTACTGCTCCAAGCTGGTTTACCTCTCCTACAGCGGCATCGACTGGCCCACGAAAAAGTCCCTGGGAAGGGCCA CCTTCAGCCCCGACGACGTGGCTGTCCGCGCCTTCAAGGGTGGCGACCTGCAATTGGTCACCTTCTACCACGACGGTAAA CCGGTCAGCGACCGGCCCGCAGTCCGCATGGCGGAGCTGATGCGGGTGCGGGAGTAG
Upstream 100 bases:
>100_bases GATGATTGTGACCCCCCTCAGTCCCCCCTACCCTGTAGGGGGGAAGCGAGCAAGGCGAGCAGGGGGGTCAAAAAATCATT CTATCAATGGAGACCACTGA
Downstream 100 bases:
>100_bases CGTGCCCATTAAAACAGTCCTAGGGGCATTGCCCCCCATCCCTCTCACATCCGCACCACGAAAGGAATCCGAATGTTATT AAATGTCGTTCTTGACCACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 498; Mature: 498
Protein sequence:
>498_residues MRRITVAVLLMAALLSPFTALAQRQAACREHLAAAHSGGRAAVNQSLAKEMTAFRTLAERALALRAETIKVGNSVHAKVD QGKPLTGDDIALLNQGITEHLTLRDEMLAVAESHECWLDASTAELSKAGITDEARLKGVMVSLASALVLYDNYLLAVSLF EGDAKLRRILNEKDPGYAVTRAALSKVTLNYNSIANRQRVRRAISFFESESKKHPALLRDGAETSYLATLIAQSPSYTMV EKVSPLYVIGRKLGFLGAATTDTLTVMEREGVNVFSMLFGNAVGLVETRKGKLALRGDVAHDVSATLRSGDILLEKTPFR LTDKLIPGYWGHAAVWIGSEAELKELGIWDNPVVARHHGEIREGRLVVEALRSGVEMNTLEHFMNVDSLGILRKAAAGRD ERGRIIIQALRQVGKPYDFNFDVESKERVYCSKLVYLSYSGIDWPTKKSLGRATFSPDDVAVRAFKGGDLQLVTFYHDGK PVSDRPAVRMAELMRVRE
Sequences:
>Translated_498_residues MRRITVAVLLMAALLSPFTALAQRQAACREHLAAAHSGGRAAVNQSLAKEMTAFRTLAERALALRAETIKVGNSVHAKVD QGKPLTGDDIALLNQGITEHLTLRDEMLAVAESHECWLDASTAELSKAGITDEARLKGVMVSLASALVLYDNYLLAVSLF EGDAKLRRILNEKDPGYAVTRAALSKVTLNYNSIANRQRVRRAISFFESESKKHPALLRDGAETSYLATLIAQSPSYTMV EKVSPLYVIGRKLGFLGAATTDTLTVMEREGVNVFSMLFGNAVGLVETRKGKLALRGDVAHDVSATLRSGDILLEKTPFR LTDKLIPGYWGHAAVWIGSEAELKELGIWDNPVVARHHGEIREGRLVVEALRSGVEMNTLEHFMNVDSLGILRKAAAGRD ERGRIIIQALRQVGKPYDFNFDVESKERVYCSKLVYLSYSGIDWPTKKSLGRATFSPDDVAVRAFKGGDLQLVTFYHDGK PVSDRPAVRMAELMRVRE >Mature_498_residues MRRITVAVLLMAALLSPFTALAQRQAACREHLAAAHSGGRAAVNQSLAKEMTAFRTLAERALALRAETIKVGNSVHAKVD QGKPLTGDDIALLNQGITEHLTLRDEMLAVAESHECWLDASTAELSKAGITDEARLKGVMVSLASALVLYDNYLLAVSLF EGDAKLRRILNEKDPGYAVTRAALSKVTLNYNSIANRQRVRRAISFFESESKKHPALLRDGAETSYLATLIAQSPSYTMV EKVSPLYVIGRKLGFLGAATTDTLTVMEREGVNVFSMLFGNAVGLVETRKGKLALRGDVAHDVSATLRSGDILLEKTPFR LTDKLIPGYWGHAAVWIGSEAELKELGIWDNPVVARHHGEIREGRLVVEALRSGVEMNTLEHFMNVDSLGILRKAAAGRD ERGRIIIQALRQVGKPYDFNFDVESKERVYCSKLVYLSYSGIDWPTKKSLGRATFSPDDVAVRAFKGGDLQLVTFYHDGK PVSDRPAVRMAELMRVRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54761; Mature: 54761
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRITVAVLLMAALLSPFTALAQRQAACREHLAAAHSGGRAAVNQSLAKEMTAFRTLAER CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH ALALRAETIKVGNSVHAKVDQGKPLTGDDIALLNQGITEHLTLRDEMLAVAESHECWLDA HHHHHHHHEECCCCEEEEECCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEC STAELSKAGITDEARLKGVMVSLASALVLYDNYLLAVSLFEGDAKLRRILNEKDPGYAVT CHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCHHHHHHHCCCCCCHHHH RAALSKVTLNYNSIANRQRVRRAISFFESESKKHPALLRDGAETSYLATLIAQSPSYTMV HHHHHHHEECHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHCCCCCHHH EKVSPLYVIGRKLGFLGAATTDTLTVMEREGVNVFSMLFGNAVGLVETRKGKLALRGDVA HHCCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHCCCEEEEEECCCCEEEECCCH HDVSATLRSGDILLEKTPFRLTDKLIPGYWGHAAVWIGSEAELKELGIWDNPVVARHHGE HHHHHHHCCCCEEEECCCCHHHHHHCCCCCCCEEEEECCCCHHHHCCCCCCCEEECCCCC IREGRLVVEALRSGVEMNTLEHFMNVDSLGILRKAAAGRDERGRIIIQALRQVGKPYDFN CHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCC FDVESKERVYCSKLVYLSYSGIDWPTKKSLGRATFSPDDVAVRAFKGGDLQLVTFYHDGK CCCCCCCHHEEEEEEEEEECCCCCCCHHHCCCCCCCCCCEEEEEECCCCEEEEEEEECCC PVSDRPAVRMAELMRVRE CCCCCHHHHHHHHHHHCC >Mature Secondary Structure MRRITVAVLLMAALLSPFTALAQRQAACREHLAAAHSGGRAAVNQSLAKEMTAFRTLAER CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH ALALRAETIKVGNSVHAKVDQGKPLTGDDIALLNQGITEHLTLRDEMLAVAESHECWLDA HHHHHHHHEECCCCEEEEECCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEC STAELSKAGITDEARLKGVMVSLASALVLYDNYLLAVSLFEGDAKLRRILNEKDPGYAVT CHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCHHHHHHHCCCCCCHHHH RAALSKVTLNYNSIANRQRVRRAISFFESESKKHPALLRDGAETSYLATLIAQSPSYTMV HHHHHHHEECHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHCCCCCHHH EKVSPLYVIGRKLGFLGAATTDTLTVMEREGVNVFSMLFGNAVGLVETRKGKLALRGDVA HHCCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHCCCEEEEEECCCCEEEECCCH HDVSATLRSGDILLEKTPFRLTDKLIPGYWGHAAVWIGSEAELKELGIWDNPVVARHHGE HHHHHHHCCCCEEEECCCCHHHHHHCCCCCCCEEEEECCCCHHHHCCCCCCCEEECCCCC IREGRLVVEALRSGVEMNTLEHFMNVDSLGILRKAAAGRDERGRIIIQALRQVGKPYDFN CHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCC FDVESKERVYCSKLVYLSYSGIDWPTKKSLGRATFSPDDVAVRAFKGGDLQLVTFYHDGK CCCCCCCHHEEEEEEEEEECCCCCCCHHHCCCCCCCCCCEEEEEECCCCEEEEEEEECCC PVSDRPAVRMAELMRVRE CCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA