| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221264
Identifier: 78221264
GI number: 78221264
Start: 46634
End: 47242
Strand: Reverse
Name: 78221264
Synonym: Gmet_0036
Alternate gene names: NA
Gene position: 47242-46634 (Counterclockwise)
Preceding gene: 78221265
Following gene: 78221262
Centisome position: 1.18
GC content: 61.41
Gene sequence:
>609_bases ATGGATATACTAGCACTGCTGGGGACGGCCACCGGCATCGCACTCTTTTCGGGGCTGAGGCTCTACACGACAATCCTTGC CATTGGCCTTGCCCTGCGATTCGGCTCCTTCCATCTTCCACAAGGCCTGGCAGGGCTTTCGGTCCTTGCCGACTGGCGGG TGCTTGCCATTGCGGCGGCATGTTTCGTTGTCGAATTCCTGGCGGACAAGATTCCCCTCGTCGATACGGTCTGGGACGGG ATCCACACCTTTATCCGCCCAATCGGGGCCGCGGTGCTCGGCTACACCGTTATCGGCAACTATGATCCGTGGATTCAGGT GGCGATCGTCCTCGCCTGTGGCGGCATCGGCTTCACCGCCCATTCGGCAAAGGCGGGCACCCGTGTGATCCTCAACCAGA GCCCGGAGCCCATCAGCAACATCGGGGCAAGCCTGGTGGAGGACCTCTTCGCCGTGGGCGGCTCCCTGATCGCCCTGACA CACCCCCTTCTGATGCTGGGAGGGGTCGTGGTATTTCTCCTTGTCTTTGCCTTCCTCGCCCGCAAAATCGTGCATCTACT GATCGGCAGGTTCCGACGCCCCAGGGGCGACATGAATGCCCCATCGTGA
Upstream 100 bases:
>100_bases AGGGGATGGAAGGCGTGCTCGAAGTGGTCGAATGAAACCCGAGGGTCAGGTCTTGGCGAAGAGGAGCATACAACCGACGT TCGGACTGGGATGATTCACC
Downstream 100 bases:
>100_bases GGTGATGCCCATCACTGGCGTCCGCCGCAACAAGGGCTCTCAGATGAACAGGAAGATCGATTCCACCTGGAGCCTGATGT CTTCAATGGCGTTGTCCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MDILALLGTATGIALFSGLRLYTTILAIGLALRFGSFHLPQGLAGLSVLADWRVLAIAAACFVVEFLADKIPLVDTVWDG IHTFIRPIGAAVLGYTVIGNYDPWIQVAIVLACGGIGFTAHSAKAGTRVILNQSPEPISNIGASLVEDLFAVGGSLIALT HPLLMLGGVVVFLLVFAFLARKIVHLLIGRFRRPRGDMNAPS
Sequences:
>Translated_202_residues MDILALLGTATGIALFSGLRLYTTILAIGLALRFGSFHLPQGLAGLSVLADWRVLAIAAACFVVEFLADKIPLVDTVWDG IHTFIRPIGAAVLGYTVIGNYDPWIQVAIVLACGGIGFTAHSAKAGTRVILNQSPEPISNIGASLVEDLFAVGGSLIALT HPLLMLGGVVVFLLVFAFLARKIVHLLIGRFRRPRGDMNAPS >Mature_202_residues MDILALLGTATGIALFSGLRLYTTILAIGLALRFGSFHLPQGLAGLSVLADWRVLAIAAACFVVEFLADKIPLVDTVWDG IHTFIRPIGAAVLGYTVIGNYDPWIQVAIVLACGGIGFTAHSAKAGTRVILNQSPEPISNIGASLVEDLFAVGGSLIALT HPLLMLGGVVVFLLVFAFLARKIVHLLIGRFRRPRGDMNAPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21357; Mature: 21357
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDILALLGTATGIALFSGLRLYTTILAIGLALRFGSFHLPQGLAGLSVLADWRVLAIAAA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH CFVVEFLADKIPLVDTVWDGIHTFIRPIGAAVLGYTVIGNYDPWIQVAIVLACGGIGFTA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC HSAKAGTRVILNQSPEPISNIGASLVEDLFAVGGSLIALTHPLLMLGGVVVFLLVFAFLA CCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH RKIVHLLIGRFRRPRGDMNAPS HHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MDILALLGTATGIALFSGLRLYTTILAIGLALRFGSFHLPQGLAGLSVLADWRVLAIAAA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH CFVVEFLADKIPLVDTVWDGIHTFIRPIGAAVLGYTVIGNYDPWIQVAIVLACGGIGFTA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC HSAKAGTRVILNQSPEPISNIGASLVEDLFAVGGSLIALTHPLLMLGGVVVFLLVFAFLA CCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH RKIVHLLIGRFRRPRGDMNAPS HHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA