| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is 78221255
Identifier: 78221255
GI number: 78221255
Start: 33627
End: 34214
Strand: Direct
Name: 78221255
Synonym: Gmet_0027
Alternate gene names: NA
Gene position: 33627-34214 (Clockwise)
Preceding gene: 78221254
Following gene: 78221256
Centisome position: 0.84
GC content: 63.95
Gene sequence:
>588_bases ATGGTGAGCTTTTGCTGCAGATTGACGCGCGCGCTTGTCTTTACGGCGCTTCTCGCCATCGTCTTCATGGTGCTGGCCGG CTGCGGGCCAAAAACCCAGATCAGCGTCTCCCCCTCCTTCCGCCCCGCCTCCGATGTGGAAACCGCCTATGTGGTCCCCT TTGGCGGCGCCCTGGTACCCGAGGAGTTCTCCGCCACGGTCTTCAACGATTTTGTGGACCAGCTCAACGGCCGCCGGCGC GAGACCGGGATCCGCTCCTTCGCCATCCTCAAGGACGAGGTGAGTGCGGTGGATCCCGGCTGGCTCGCCCGCCAGTACTA CATCTCCGGCGACATCTGGAGTTATGTGGAGGACTCGGGGTGCTGTTCCACCAATATCCGGGTCAAGGCCCGCGTTTACG TCCATGAGCCCGGGAGGAGCATCCCGTCGGTGGAGATCTTCGTTCCCATGGAGAGCTTCTTCGACCATGACCGCTCCACC ATCGACCGGGAGCGGGGCCGCCTTGCCCGGGATCTTGCCCGGGACCTCTCCCAGAAGGTACTTGCCGCCATGGCGCCGCT ACGTCCCCCCGTGTCTTCTTCCCCCTGA
Upstream 100 bases:
>100_bases GGAAGAAGCTTGCCTCCTACGCCCAGGCCAAGGTGCCGGGGAGCCGGGAGTACGAGGTCCTCTACCAGAAATTCTACCAG GAAGAGATGGCGAAGCGGAA
Downstream 100 bases:
>100_bases AATTTTTTTTGCAAATGACCTTGATTTTTGCCCGGGGGGTGACTATAGTTACTTCGCGTTAGCACTCAGCTGTATCGAGT GCTAATTTTTTTCGATGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MVSFCCRLTRALVFTALLAIVFMVLAGCGPKTQISVSPSFRPASDVETAYVVPFGGALVPEEFSATVFNDFVDQLNGRRR ETGIRSFAILKDEVSAVDPGWLARQYYISGDIWSYVEDSGCCSTNIRVKARVYVHEPGRSIPSVEIFVPMESFFDHDRST IDRERGRLARDLARDLSQKVLAAMAPLRPPVSSSP
Sequences:
>Translated_195_residues MVSFCCRLTRALVFTALLAIVFMVLAGCGPKTQISVSPSFRPASDVETAYVVPFGGALVPEEFSATVFNDFVDQLNGRRR ETGIRSFAILKDEVSAVDPGWLARQYYISGDIWSYVEDSGCCSTNIRVKARVYVHEPGRSIPSVEIFVPMESFFDHDRST IDRERGRLARDLARDLSQKVLAAMAPLRPPVSSSP >Mature_195_residues MVSFCCRLTRALVFTALLAIVFMVLAGCGPKTQISVSPSFRPASDVETAYVVPFGGALVPEEFSATVFNDFVDQLNGRRR ETGIRSFAILKDEVSAVDPGWLARQYYISGDIWSYVEDSGCCSTNIRVKARVYVHEPGRSIPSVEIFVPMESFFDHDRST IDRERGRLARDLARDLSQKVLAAMAPLRPPVSSSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21585; Mature: 21585
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSFCCRLTRALVFTALLAIVFMVLAGCGPKTQISVSPSFRPASDVETAYVVPFGGALVP CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCC EEFSATVFNDFVDQLNGRRRETGIRSFAILKDEVSAVDPGWLARQYYISGDIWSYVEDSG HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHEEEEECCCHHHHHCCCC CCSTNIRVKARVYVHEPGRSIPSVEIFVPMESFFDHDRSTIDRERGRLARDLARDLSQKV CCCCCEEEEEEEEEECCCCCCCCEEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LAAMAPLRPPVSSSP HHHHHCCCCCCCCCC >Mature Secondary Structure MVSFCCRLTRALVFTALLAIVFMVLAGCGPKTQISVSPSFRPASDVETAYVVPFGGALVP CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCC EEFSATVFNDFVDQLNGRRRETGIRSFAILKDEVSAVDPGWLARQYYISGDIWSYVEDSG HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHEEEEECCCHHHHHCCCC CCSTNIRVKARVYVHEPGRSIPSVEIFVPMESFFDHDRSTIDRERGRLARDLARDLSQKV CCCCCEEEEEEEEEECCCCCCCCEEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LAAMAPLRPPVSSSP HHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA