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The map label for this gene is 78189954

Identifier: 78189954

GI number: 78189954

Start: 2537276

End: 2538286

Strand: Reverse

Name: 78189954

Synonym: Cag_2001

Alternate gene names: NA

Gene position: 2538286-2537276 (Counterclockwise)

Preceding gene: 78189957

Following gene: 78189953

Centisome position: 98.69

GC content: 46.79

Gene sequence:

>1011_bases
ATGAACTCTTTCAAATCAATTTCGCGCACTCTGTTTGCACTTTCTGTGTTTACGGCAACTCCCCTTTTTGCTGAAACAGC
AACGTCGCAACCATCCACCCAACAAGAGCCATTAAATATTAGCGGTACGCTTGAGGTTGAGGGATATGGTGAGCGTGTTG
CGGGTAAAACAACTTCTGAGTTTGTACTTGCTACTTTTGAAACTCGCCTTGAACGCCAGCTCTCCAAACATGTGTTCGCT
CATGCAACGCTATTGTTTGAAGAAGATGGTGATAATGAATTGTTGGTGGATGAGGCTTTTATAACCTACAAAGCACTCAA
TTCGCCTTGGTATGTAAAAGCTGGACGCTTTACGCAACCCTTTGGCTGGTTTGAAAGTGGAATGATTTCTGATCCCTTAA
CGCTTGAGTTAGGCGAAACCAAACATCATGCCGCATTGCTTTTAGGGACAGAGAGTGAGCAATTAAGCGCCGCGCTCGGC
ATGTTTCGTGGCGATGTTCAATATGATAACAACCCTTCCATTGACAGCTTTGTTGCGGCAGTAGCAACTAACTTTACGCT
TGGCAAAGAGATGCGTGGAACGCTTGGTGCTTCATTTACCAACAATATGGGCGACACCGATGGCTTGCAGGATCTGTTTG
ACGATGGTGCTGGTAACTTAGTTGGAACCGAAAAGGTGAGCGGTTATAGCTTTTATGGTTCGCTGGCGCAAGGAGCATTG
ACGTTGCGAGCAGAGTATGTTGCTGCGGCAAATTCGTTTGTTGATGGCACATTAGCAGGATTGAAGCCTTCAGCAAGTAA
CGTTGAAGTGAGCTATGCGGTGCGCGAGGGGGTTGATGTTACGGCGCGTTATGGCAGTGGTTCCGATATGGATATTGCAA
ACCAATATGGTGCGGCTTTGGCTTGTACGGTAGATGGTGCTGCAACGTTAGGAGTTGAATATCTCCATAACAGCATGGAT
AGTGCGGCTGATGCTAACCGTCTAACGGTGCAGCTTGCCGTAGAGTTTTAA

Upstream 100 bases:

>100_bases
CGAGTTGCCTGAGTGCTCCTGTTTTTTTGTTGGATATTTTAAAATACCTCTTTATCTTTAATAAATCTAAATAATATTAA
ATACTCGACTATCGTTGATT

Downstream 100 bases:

>100_bases
CATCATCCATTCCCCCACTTTTCTTGAATCACGATTCCACAAATTTCAGGAAAAGCTGCACATTGCAGGGAAACATATTC
CCCTTATTTGCTTGCAACCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MNSFKSISRTLFALSVFTATPLFAETATSQPSTQQEPLNISGTLEVEGYGERVAGKTTSEFVLATFETRLERQLSKHVFA
HATLLFEEDGDNELLVDEAFITYKALNSPWYVKAGRFTQPFGWFESGMISDPLTLELGETKHHAALLLGTESEQLSAALG
MFRGDVQYDNNPSIDSFVAAVATNFTLGKEMRGTLGASFTNNMGDTDGLQDLFDDGAGNLVGTEKVSGYSFYGSLAQGAL
TLRAEYVAAANSFVDGTLAGLKPSASNVEVSYAVREGVDVTARYGSGSDMDIANQYGAALACTVDGAATLGVEYLHNSMD
SAADANRLTVQLAVEF

Sequences:

>Translated_336_residues
MNSFKSISRTLFALSVFTATPLFAETATSQPSTQQEPLNISGTLEVEGYGERVAGKTTSEFVLATFETRLERQLSKHVFA
HATLLFEEDGDNELLVDEAFITYKALNSPWYVKAGRFTQPFGWFESGMISDPLTLELGETKHHAALLLGTESEQLSAALG
MFRGDVQYDNNPSIDSFVAAVATNFTLGKEMRGTLGASFTNNMGDTDGLQDLFDDGAGNLVGTEKVSGYSFYGSLAQGAL
TLRAEYVAAANSFVDGTLAGLKPSASNVEVSYAVREGVDVTARYGSGSDMDIANQYGAALACTVDGAATLGVEYLHNSMD
SAADANRLTVQLAVEF
>Mature_336_residues
MNSFKSISRTLFALSVFTATPLFAETATSQPSTQQEPLNISGTLEVEGYGERVAGKTTSEFVLATFETRLERQLSKHVFA
HATLLFEEDGDNELLVDEAFITYKALNSPWYVKAGRFTQPFGWFESGMISDPLTLELGETKHHAALLLGTESEQLSAALG
MFRGDVQYDNNPSIDSFVAAVATNFTLGKEMRGTLGASFTNNMGDTDGLQDLFDDGAGNLVGTEKVSGYSFYGSLAQGAL
TLRAEYVAAANSFVDGTLAGLKPSASNVEVSYAVREGVDVTARYGSGSDMDIANQYGAALACTVDGAATLGVEYLHNSMD
SAADANRLTVQLAVEF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0422 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35906; Mature: 35906

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSFKSISRTLFALSVFTATPLFAETATSQPSTQQEPLNISGTLEVEGYGERVAGKTTSE
CCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHH
FVLATFETRLERQLSKHVFAHATLLFEEDGDNELLVDEAFITYKALNSPWYVKAGRFTQP
HHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCEEEEEHHEEEEEECCCCEEEECCCCCCC
FGWFESGMISDPLTLELGETKHHAALLLGTESEQLSAALGMFRGDVQYDNNPSIDSFVAA
CCCHHCCCCCCCEEEEECCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
VATNFTLGKEMRGTLGASFTNNMGDTDGLQDLFDDGAGNLVGTEKVSGYSFYGSLAQGAL
HHHCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCEECCCCCCEEEHHHHHCCEE
TLRAEYVAAANSFVDGTLAGLKPSASNVEVSYAVREGVDVTARYGSGSDMDIANQYGAAL
EEHHHHHHHHHHHCCCHHHCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHCCCEE
ACTVDGAATLGVEYLHNSMDSAADANRLTVQLAVEF
EEEECCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEC
>Mature Secondary Structure
MNSFKSISRTLFALSVFTATPLFAETATSQPSTQQEPLNISGTLEVEGYGERVAGKTTSE
CCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHH
FVLATFETRLERQLSKHVFAHATLLFEEDGDNELLVDEAFITYKALNSPWYVKAGRFTQP
HHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCEEEEEHHEEEEEECCCCEEEECCCCCCC
FGWFESGMISDPLTLELGETKHHAALLLGTESEQLSAALGMFRGDVQYDNNPSIDSFVAA
CCCHHCCCCCCCEEEEECCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
VATNFTLGKEMRGTLGASFTNNMGDTDGLQDLFDDGAGNLVGTEKVSGYSFYGSLAQGAL
HHHCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCEECCCCCCEEEHHHHHCCEE
TLRAEYVAAANSFVDGTLAGLKPSASNVEVSYAVREGVDVTARYGSGSDMDIANQYGAAL
EEHHHHHHHHHHHCCCHHHCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHCCCEE
ACTVDGAATLGVEYLHNSMDSAADANRLTVQLAVEF
EEEECCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]