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The map label for this gene is fccB [H]

Identifier: 78189957

GI number: 78189957

Start: 2540686

End: 2541981

Strand: Reverse

Name: fccB [H]

Synonym: Cag_2004

Alternate gene names: 78189957

Gene position: 2541981-2540686 (Counterclockwise)

Preceding gene: 78189958

Following gene: 78189954

Centisome position: 98.83

GC content: 44.91

Gene sequence:

>1296_bases
ATGAGTAATGGATTATCACGTAGGGATTTTAACAAGCTGCTGTTGTCGGGTGTTGCTGGTTCAACGATTGGTTTATTTGG
CAACTCGGGAACTCTGTTTGGTGCAACCAGCAAGCGGGTTGTGGTAATTGGTGGTGGCTTTGGTGGTGCCTCAGCCGCAA
AATATCTTCGTAAACTTGACCCAACCATTCAAGTAACGTTGGTTGAACCAAAAAGCGTTTATCACACCTGTCCATTTAGC
AACTGGGTGCTTAGTGGACTAAAGAATATGGAAGATATTGCCCACTTTTACGATGTTCTTAGAAATCGCTACAAAGTGAA
CGTTATTGCTGATACTGCCGTCAGCATTGATGCTGACAAGAGCAGTGTTACGCTACAAACAGGCAAAACTTTATATTTCG
ATCGTTTAATTGTAGCTCCCGGTATTGACTTTAAATATGATTCCGTTCAAGGTTATAGTGAAAATGTTGCTAATTCGGTA
ATGCCTCATGCGTGGCAAGCTGGTCCGCAAACAATTTTGTTGCACAAACAACTACAAGCCATGCCAAATGGTGGTAAAGT
ATTTATTAGCGCCCCTGCAAACCCCTTCCGTTGCCCACCAGGACCTTATGAGCGTGCCAGCTTAATTGCACGTTACTTAA
AAGAGCAAAAGCCACTATCCAAAGTTATTATTTTTGATGCTAAAGAGAGCTTCTCAAAGCAAGGGCTCTTTAAGCAAGCT
TGGGAACGCCTTTATCCCGGCATGATTGAGTGGCGTGCCTCCACTATGGGCGGTAAAGTGGTATCGGTTGATGCTGCAAC
CATGACGGTTACCACTGAGTTTGGTGCCGAAAAGGGAGATGTTATCAATATTATTCCTGCCCAAAAAGCAGGTAAAATTG
CGGTTGATGCTGGGCTTACCGATGCTTCAGGCTGGTGCCCGATTAATCCCATCTCCTTTGAGTCAACCTTGCATCCTGGC
ATTCACGTTATTGGTGATGCTGCTATTGCTGGCGCTATGCCAAAGTCAGGCTTTGCGGCAAGTAGCCAAGGTAAGGTTGC
CGCAGCGGCAATTGTGCGCCTCTTCCAAGGCAAGGTTCCTGCACCACCTTCACTTGTTAACACCTGCTATAGTTTAATTG
ATAAGAACTATGCTATATCGGTTGCTGGTGTTTATAAACTTGCAATGACGGGTATTGTAGAAATTAAAGGTTCAGGCGGC
TTAACACCAATGAATGCTGATGCCGATCAGCTTGAGCAAGAGGCAATGTTTGCCCAAGGCTGGTACGATAATATTTCCCA
AGACGTTTGGGGATAA

Upstream 100 bases:

>100_bases
GCGCCATGCTAAGGGCTACAGCGATGAAGAAATTACGTTGATCGCCCAATATTTTGGTTCTCTTTCCCGTAAAAAATAAA
CCAGCAGAGGAGCATACATT

Downstream 100 bases:

>100_bases
GCTACTCGTTGCACCATTTTTTCGATTGTTATGCACAAAAGCGCCAGAAGGAGTAATCTTTCAGGCGCTTTTATTGTTTT
TGGTTGTTTTTGTAAAGCTT

Product: sulfide dehydrogenase, flavoprotein subunit

Products: NA

Alternate protein names: FCSD; Flavocytochrome c flavoprotein subunit; FC [H]

Number of amino acids: Translated: 431; Mature: 430

Protein sequence:

>431_residues
MSNGLSRRDFNKLLLSGVAGSTIGLFGNSGTLFGATSKRVVVIGGGFGGASAAKYLRKLDPTIQVTLVEPKSVYHTCPFS
NWVLSGLKNMEDIAHFYDVLRNRYKVNVIADTAVSIDADKSSVTLQTGKTLYFDRLIVAPGIDFKYDSVQGYSENVANSV
MPHAWQAGPQTILLHKQLQAMPNGGKVFISAPANPFRCPPGPYERASLIARYLKEQKPLSKVIIFDAKESFSKQGLFKQA
WERLYPGMIEWRASTMGGKVVSVDAATMTVTTEFGAEKGDVINIIPAQKAGKIAVDAGLTDASGWCPINPISFESTLHPG
IHVIGDAAIAGAMPKSGFAASSQGKVAAAAIVRLFQGKVPAPPSLVNTCYSLIDKNYAISVAGVYKLAMTGIVEIKGSGG
LTPMNADADQLEQEAMFAQGWYDNISQDVWG

Sequences:

>Translated_431_residues
MSNGLSRRDFNKLLLSGVAGSTIGLFGNSGTLFGATSKRVVVIGGGFGGASAAKYLRKLDPTIQVTLVEPKSVYHTCPFS
NWVLSGLKNMEDIAHFYDVLRNRYKVNVIADTAVSIDADKSSVTLQTGKTLYFDRLIVAPGIDFKYDSVQGYSENVANSV
MPHAWQAGPQTILLHKQLQAMPNGGKVFISAPANPFRCPPGPYERASLIARYLKEQKPLSKVIIFDAKESFSKQGLFKQA
WERLYPGMIEWRASTMGGKVVSVDAATMTVTTEFGAEKGDVINIIPAQKAGKIAVDAGLTDASGWCPINPISFESTLHPG
IHVIGDAAIAGAMPKSGFAASSQGKVAAAAIVRLFQGKVPAPPSLVNTCYSLIDKNYAISVAGVYKLAMTGIVEIKGSGG
LTPMNADADQLEQEAMFAQGWYDNISQDVWG
>Mature_430_residues
SNGLSRRDFNKLLLSGVAGSTIGLFGNSGTLFGATSKRVVVIGGGFGGASAAKYLRKLDPTIQVTLVEPKSVYHTCPFSN
WVLSGLKNMEDIAHFYDVLRNRYKVNVIADTAVSIDADKSSVTLQTGKTLYFDRLIVAPGIDFKYDSVQGYSENVANSVM
PHAWQAGPQTILLHKQLQAMPNGGKVFISAPANPFRCPPGPYERASLIARYLKEQKPLSKVIIFDAKESFSKQGLFKQAW
ERLYPGMIEWRASTMGGKVVSVDAATMTVTTEFGAEKGDVINIIPAQKAGKIAVDAGLTDASGWCPINPISFESTLHPGI
HVIGDAAIAGAMPKSGFAASSQGKVAAAAIVRLFQGKVPAPPSLVNTCYSLIDKNYAISVAGVYKLAMTGIVEIKGSGGL
TPMNADADQLEQEAMFAQGWYDNISQDVWG

Specific function: Unknown

COG id: COG0446

COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016156
- InterPro:   IPR013027
- InterPro:   IPR015323
- InterPro:   IPR015904
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09242 FCSD-flav_bind; PF07992 Pyr_redox_2 [H]

EC number: NA

Molecular weight: Translated: 46110; Mature: 45979

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNGLSRRDFNKLLLSGVAGSTIGLFGNSGTLFGATSKRVVVIGGGFGGASAAKYLRKLD
CCCCCCHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCEEEEEECCCCCHHHHHHHHHCC
PTIQVTLVEPKSVYHTCPFSNWVLSGLKNMEDIAHFYDVLRNRYKVNVIADTAVSIDADK
CEEEEEEECCHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECEEEEECCC
SSVTLQTGKTLYFDRLIVAPGIDFKYDSVQGYSENVANSVMPHAWQAGPQTILLHKQLQA
CEEEEECCCEEEEEEEEECCCCCCEECCCCCCHHHHHHHCCCCCCCCCCCEEEEEHHHHC
MPNGGKVFISAPANPFRCPPGPYERASLIARYLKEQKPLSKVIIFDAKESFSKQGLFKQA
CCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHCCHHHHH
WERLYPGMIEWRASTMGGKVVSVDAATMTVTTEFGAEKGDVINIIPAQKAGKIAVDAGLT
HHHHCCCCEEEEHHCCCCEEEEEECEEEEEEECCCCCCCCEEEEECCCCCCCEEEECCCC
DASGWCPINPISFESTLHPGIHVIGDAAIAGAMPKSGFAASSQGKVAAAAIVRLFQGKVP
CCCCCCCCCCCCCCCCCCCCEEEEECHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
APPSLVNTCYSLIDKNYAISVAGVYKLAMTGIVEIKGSGGLTPMNADADQLEQEAMFAQG
CCHHHHHHHHHHHCCCCEEEHHHHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHC
WYDNISQDVWG
HHHHHHHHHCC
>Mature Secondary Structure 
SNGLSRRDFNKLLLSGVAGSTIGLFGNSGTLFGATSKRVVVIGGGFGGASAAKYLRKLD
CCCCCHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCEEEEEECCCCCHHHHHHHHHCC
PTIQVTLVEPKSVYHTCPFSNWVLSGLKNMEDIAHFYDVLRNRYKVNVIADTAVSIDADK
CEEEEEEECCHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECEEEEECCC
SSVTLQTGKTLYFDRLIVAPGIDFKYDSVQGYSENVANSVMPHAWQAGPQTILLHKQLQA
CEEEEECCCEEEEEEEEECCCCCCEECCCCCCHHHHHHHCCCCCCCCCCCEEEEEHHHHC
MPNGGKVFISAPANPFRCPPGPYERASLIARYLKEQKPLSKVIIFDAKESFSKQGLFKQA
CCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHCCHHHHH
WERLYPGMIEWRASTMGGKVVSVDAATMTVTTEFGAEKGDVINIIPAQKAGKIAVDAGLT
HHHHCCCCEEEEHHCCCCEEEEEECEEEEEEECCCCCCCCEEEEECCCCCCCEEEECCCC
DASGWCPINPISFESTLHPGIHVIGDAAIAGAMPKSGFAASSQGKVAAAAIVRLFQGKVP
CCCCCCCCCCCCCCCCCCCCEEEEECHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
APPSLVNTCYSLIDKNYAISVAGVYKLAMTGIVEIKGSGGLTPMNADADQLEQEAMFAQG
CCHHHHHHHHHHHCCCCEEEHHHHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHC
WYDNISQDVWG
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8390993; 1649169; 7939681 [H]