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The map label for this gene is scpA [H]

Identifier: 78189949

GI number: 78189949

Start: 2531281

End: 2532027

Strand: Reverse

Name: scpA [H]

Synonym: Cag_1996

Alternate gene names: 78189949

Gene position: 2532027-2531281 (Counterclockwise)

Preceding gene: 78189951

Following gene: 78189946

Centisome position: 98.44

GC content: 48.19

Gene sequence:

>747_bases
ATGTTCACCATTAATCTTGACGAGTTTGAAGGTCCGCTTGACCTCCTTCTTTTTTTTATAAAGCGCGACGAACTCGACAT
TTATAACATTCCCATTGCCCGCATTACCACTGATTTTATCAGTTACATTCATGCGGCACGTCAGCTTGACTTGGAAGTTG
CCGCCGAGTTTATTTACATGGCATCAATGCTGATGAGCATTAAAGCACGAATGCTGTTGCCTCGTCCACCCGATGACCCA
ACGGCAGAGAGCGATGAATTTGACCCACGCACCGAGTTAGTTGAGCGATTGTTGGAATATCAGCGCATTAAGGAAGCGGC
TGAAGCGTTACGCTTACGCGCCGATGAACGGGCATTGCTTTTGGCGCGAGGTTGGAGTGAATTGCAGGAAGCGGTAAGCG
CGGGAAACGAGCAAGAGGGAGAAGATGAATTGTTGCAACAGCCAACGCTTTACCACCTCATGCTGGCTTGTAATGCCATG
CTGAAACGGCGCCCTCGCCCTATGACGCGCAGCGTTGCCGATGTACCTGTAACCATTGAAGAGCAAAGCGCTATGATTCT
TGAGCGCCTTCGGTACGAGCCGCAACTCTCATTTACGGTACTGCTTGCCTCGTTTTCGGAAAATCTTGTGGTGGTTGTAA
CTTTTTTGGCAGTGCTTGAACTTTGTAAAAGCCAACGAATTAGCGTGCTCATTAACGATGCCTATAACGATGTTTGGTTA
ACGTTGCGTGTGTCGCAAAGCAATTAA

Upstream 100 bases:

>100_bases
TGCTCGAAATCCTCATGTACTATCTGTACACTCCGGTTTCTGCGCTCCGTCCGCCTCGCTCTAAAGGTGCTCATAACAAT
TTTTAGAGGTGCCCAAAAGC

Downstream 100 bases:

>100_bases
CCTGAATAAGTAAGGTTAAGATAGTTTCTAAACGCTGCAAATTATGGAAGCAATTGCTTTATTTTATAAGGACTACGTCG
CATATCAAGTATTCTCCAAA

Product: putative segregation and condensation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MFTINLDEFEGPLDLLLFFIKRDELDIYNIPIARITTDFISYIHAARQLDLEVAAEFIYMASMLMSIKARMLLPRPPDDP
TAESDEFDPRTELVERLLEYQRIKEAAEALRLRADERALLLARGWSELQEAVSAGNEQEGEDELLQQPTLYHLMLACNAM
LKRRPRPMTRSVADVPVTIEEQSAMILERLRYEPQLSFTVLLASFSENLVVVVTFLAVLELCKSQRISVLINDAYNDVWL
TLRVSQSN

Sequences:

>Translated_248_residues
MFTINLDEFEGPLDLLLFFIKRDELDIYNIPIARITTDFISYIHAARQLDLEVAAEFIYMASMLMSIKARMLLPRPPDDP
TAESDEFDPRTELVERLLEYQRIKEAAEALRLRADERALLLARGWSELQEAVSAGNEQEGEDELLQQPTLYHLMLACNAM
LKRRPRPMTRSVADVPVTIEEQSAMILERLRYEPQLSFTVLLASFSENLVVVVTFLAVLELCKSQRISVLINDAYNDVWL
TLRVSQSN
>Mature_248_residues
MFTINLDEFEGPLDLLLFFIKRDELDIYNIPIARITTDFISYIHAARQLDLEVAAEFIYMASMLMSIKARMLLPRPPDDP
TAESDEFDPRTELVERLLEYQRIKEAAEALRLRADERALLLARGWSELQEAVSAGNEQEGEDELLQQPTLYHLMLACNAM
LKRRPRPMTRSVADVPVTIEEQSAMILERLRYEPQLSFTVLLASFSENLVVVVTFLAVLELCKSQRISVLINDAYNDVWL
TLRVSQSN

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 28510; Mature: 28510

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTINLDEFEGPLDLLLFFIKRDELDIYNIPIARITTDFISYIHAARQLDLEVAAEFIYM
CEEECCHHHCCHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASMLMSIKARMLLPRPPDDPTAESDEFDPRTELVERLLEYQRIKEAAEALRLRADERALL
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LARGWSELQEAVSAGNEQEGEDELLQQPTLYHLMLACNAMLKRRPRPMTRSVADVPVTIE
HHCCHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEC
EQSAMILERLRYEPQLSFTVLLASFSENLVVVVTFLAVLELCKSQRISVLINDAYNDVWL
HHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEE
TLRVSQSN
EEEEECCC
>Mature Secondary Structure
MFTINLDEFEGPLDLLLFFIKRDELDIYNIPIARITTDFISYIHAARQLDLEVAAEFIYM
CEEECCHHHCCHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASMLMSIKARMLLPRPPDDPTAESDEFDPRTELVERLLEYQRIKEAAEALRLRADERALL
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LARGWSELQEAVSAGNEQEGEDELLQQPTLYHLMLACNAMLKRRPRPMTRSVADVPVTIE
HHCCHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEC
EQSAMILERLRYEPQLSFTVLLASFSENLVVVVTFLAVLELCKSQRISVLINDAYNDVWL
HHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEE
TLRVSQSN
EEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA