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The map label for this gene is dps [H]

Identifier: 78189932

GI number: 78189932

Start: 2510128

End: 2510622

Strand: Reverse

Name: dps [H]

Synonym: Cag_1979

Alternate gene names: 78189932

Gene position: 2510622-2510128 (Counterclockwise)

Preceding gene: 78189933

Following gene: 78189931

Centisome position: 97.61

GC content: 44.04

Gene sequence:

>495_bases
ATGGGAACAAGAGGACGTGAAATTGTAGGCTCGCACCTTGAGCGTGTGCTTGAGCTACTCAACAAAGCTTTTGCGGATGA
ATGGCTTGCTTATTATCAATATTGGGTTGGCGCAAAAATTGTGAACGGACCTATGAAAGATGCCGTTATTGCTGAGCTTT
TGCAGCACGCTGCCGATGAGCTTCGTCATGCCGATATGCTGAGCACCCGCATTATTCAGCTTGGAGGCAAGCCGCTTATT
TCGCCACAAGATTGGTTTACATGGAGCAATTGTGGGTACGATGCACCCGAAAATCCTTTTGTGCAGCGCATTTTAGAGCA
AAATATTTCAGGCGAGCAGTGCGCTATTTCTACGTATAGCGCCATTATTGAGGAGATTGGCTTAAAAGATCCAATTACCT
ACAACATTGCTGTGCAAATTATGCAAGATGAGGTTGAGCACGAAGAGGATTTACAATCGCTTTTTGAAGATCTCAGCTTG
TTTGTTAAAAAGTAA

Upstream 100 bases:

>100_bases
GTTGCTCTTTTATCAACTTTCTTACTATTATTGCATGTAAAGTAGTGCGCTATTTTGGTGCATCGGCTTTTTTATTAATT
CTTTAGAGAGGAATAACATT

Downstream 100 bases:

>100_bases
TTATTGCCTTACTCTCAGCGCATAACATTGCTTGACGAGTAAACAACACAACATTTGTTGAACATTAAATTATAGAGGAG
AGCGTATGCCAACAACCCAT

Product: bacterioferritin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MGTRGREIVGSHLERVLELLNKAFADEWLAYYQYWVGAKIVNGPMKDAVIAELLQHAADELRHADMLSTRIIQLGGKPLI
SPQDWFTWSNCGYDAPENPFVQRILEQNISGEQCAISTYSAIIEEIGLKDPITYNIAVQIMQDEVEHEEDLQSLFEDLSL
FVKK

Sequences:

>Translated_164_residues
MGTRGREIVGSHLERVLELLNKAFADEWLAYYQYWVGAKIVNGPMKDAVIAELLQHAADELRHADMLSTRIIQLGGKPLI
SPQDWFTWSNCGYDAPENPFVQRILEQNISGEQCAISTYSAIIEEIGLKDPITYNIAVQIMQDEVEHEEDLQSLFEDLSL
FVKK
>Mature_163_residues
GTRGREIVGSHLERVLELLNKAFADEWLAYYQYWVGAKIVNGPMKDAVIAELLQHAADELRHADMLSTRIIQLGGKPLIS
PQDWFTWSNCGYDAPENPFVQRILEQNISGEQCAISTYSAIIEEIGLKDPITYNIAVQIMQDEVEHEEDLQSLFEDLSLF
VKK

Specific function: Protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction. It ef

COG id: COG2193

COG function: function code P; Bacterioferritin (cytochrome b1)

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dps family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR008331
- InterPro:   IPR014490 [H]

Pfam domain/function: PF00210 Ferritin [H]

EC number: NA

Molecular weight: Translated: 18654; Mature: 18523

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTRGREIVGSHLERVLELLNKAFADEWLAYYQYWVGAKIVNGPMKDAVIAELLQHAADE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LRHADMLSTRIIQLGGKPLISPQDWFTWSNCGYDAPENPFVQRILEQNISGEQCAISTYS
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHH
AIIEEIGLKDPITYNIAVQIMQDEVEHEEDLQSLFEDLSLFVKK
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GTRGREIVGSHLERVLELLNKAFADEWLAYYQYWVGAKIVNGPMKDAVIAELLQHAADE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LRHADMLSTRIIQLGGKPLISPQDWFTWSNCGYDAPENPFVQRILEQNISGEQCAISTYS
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHH
AIIEEIGLKDPITYNIAVQIMQDEVEHEEDLQSLFEDLSLFVKK
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA