Click here to switch to the map view.

The map label for this gene is ngr [H]

Identifier: 78189931

GI number: 78189931

Start: 2509542

End: 2510042

Strand: Reverse

Name: ngr [H]

Synonym: Cag_1978

Alternate gene names: 78189931

Gene position: 2510042-2509542 (Counterclockwise)

Preceding gene: 78189932

Following gene: 78189926

Centisome position: 97.59

GC content: 45.71

Gene sequence:

>501_bases
ATGCCAACAACCCATGAGAATCTTAAAAATGCTTTTGCAGGCGAAAGCCAAGCATTTATGAAATACACCGCTTTTGCAAA
AAAGGCAGAAAAAGATGGTTTTGCCAACATTGCAAAGCTTTTTAGAACGACGGCTGAAGCTGAAAAAATTCATGCCGAAG
GGCACCTTTCTGCTGACGATGCAATTCAAACAACGGCAGCCAACCTTGAAACCGCAATTGGTGGCGAAACCTACGAGCAC
AACGAAATGTATCCACCAATGTACGAGCAAGCGGTTGCTGAAGGGCACAAAGCAAAGCGTATGTTTGGTTTTGCCGTAGA
GGCTGAACAGGTACATGCAGCGTTGTATCGTAAAGCGCTTGATGCGGTACAAAATGGTCAAGACCTTAGCGAAAGCAACA
TTTGGCTCTGCCCTGTGTGCGGTCATATTGAGCTTGGTAACCCACCAGCCAACTGCCCAATTTGCAACGTTAAAGCTTCG
GTTTACGTGCAAGTAAGCTAA

Upstream 100 bases:

>100_bases
TTTGTTAAAAAGTAATTATTGCCTTACTCTCAGCGCATAACATTGCTTGACGAGTAAACAACACAACATTTGTTGAACAT
TAAATTATAGAGGAGAGCGT

Downstream 100 bases:

>100_bases
TTCAGGTCAGCAATTTCCGCCTTACAACCACAAAGCCCTCATGAACGAGGGCTTTGTGGTTTTTGAGGAGAAAGGGGGAT
AGAGTAGATTTATTCGTTTG

Product: rubrerythrin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MPTTHENLKNAFAGESQAFMKYTAFAKKAEKDGFANIAKLFRTTAEAEKIHAEGHLSADDAIQTTAANLETAIGGETYEH
NEMYPPMYEQAVAEGHKAKRMFGFAVEAEQVHAALYRKALDAVQNGQDLSESNIWLCPVCGHIELGNPPANCPICNVKAS
VYVQVS

Sequences:

>Translated_166_residues
MPTTHENLKNAFAGESQAFMKYTAFAKKAEKDGFANIAKLFRTTAEAEKIHAEGHLSADDAIQTTAANLETAIGGETYEH
NEMYPPMYEQAVAEGHKAKRMFGFAVEAEQVHAALYRKALDAVQNGQDLSESNIWLCPVCGHIELGNPPANCPICNVKAS
VYVQVS
>Mature_165_residues
PTTHENLKNAFAGESQAFMKYTAFAKKAEKDGFANIAKLFRTTAEAEKIHAEGHLSADDAIQTTAANLETAIGGETYEHN
EMYPPMYEQAVAEGHKAKRMFGFAVEAEQVHAALYRKALDAVQNGQDLSESNIWLCPVCGHIELGNPPANCPICNVKASV
YVQVS

Specific function: Exhibits NADH peroxidase activity (in vitro) [H]

COG id: COG1592

COG function: function code C; Rubrerythrin

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rubredoxin-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR004039
- InterPro:   IPR003251 [H]

Pfam domain/function: PF02915 Rubrerythrin [H]

EC number: NA

Molecular weight: Translated: 18104; Mature: 17973

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTTHENLKNAFAGESQAFMKYTAFAKKAEKDGFANIAKLFRTTAEAEKIHAEGHLSADD
CCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCH
AIQTTAANLETAIGGETYEHNEMYPPMYEQAVAEGHKAKRMFGFAVEAEQVHAALYRKAL
HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
DAVQNGQDLSESNIWLCPVCGHIELGNPPANCPICNVKASVYVQVS
HHHHCCCCCCCCCEEEEEECCEEEECCCCCCCEEEECCEEEEEEEC
>Mature Secondary Structure 
PTTHENLKNAFAGESQAFMKYTAFAKKAEKDGFANIAKLFRTTAEAEKIHAEGHLSADD
CCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCH
AIQTTAANLETAIGGETYEHNEMYPPMYEQAVAEGHKAKRMFGFAVEAEQVHAALYRKAL
HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
DAVQNGQDLSESNIWLCPVCGHIELGNPPANCPICNVKASVYVQVS
HHHHCCCCCCCCCEEEEEECCEEEECCCCCCCEEEECCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9226272; 8383040 [H]