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The map label for this gene is hmeC [H]

Identifier: 78189901

GI number: 78189901

Start: 2479197

End: 2480195

Strand: Reverse

Name: hmeC [H]

Synonym: Cag_1948

Alternate gene names: 78189901

Gene position: 2480195-2479197 (Counterclockwise)

Preceding gene: 78189902

Following gene: 78189900

Centisome position: 96.43

GC content: 42.14

Gene sequence:

>999_bases
ATGACAAAAAAAGTTCTCATGCCGCTCCTTATGGTTTTTGTGCTTTGCTTGATTCCCTACATTGGAGTTAAGTATGCAGG
GCTTACAACCCTTTTTGCGGTTATTATTCCCCTTGCATCATTAAGCATATTGCTTGTAGGATTTGCGTTGCGTCTTGTTG
ATTGGCTACGTCGTCCCGTGCCGTTTCGGATTCCAACAACATGTGGGCAGGAAAAATCATTTAATTGGGTGAAGCACGAT
CAGCTTGACAATCCGCACAATTGGTGGCAAGTGGTGTTGCGTGTACTTGGTGAAGTGCTGTTGTTTCGTTCACTGTTCCG
CAATAAAAAAGCTGAACTGCATGACGGTCAAAAATTGACGTATGGCTCATCGAAATGGTTGTGGTTTGCTGGGTTACTGT
TCCATTGGTCAATGCTCATTATTGTGCTGCGCCACACTAAATTCTTTTTTGTAACGGAGCCTGCGTTTGCAACGTTTCTT
GATCATGCTGATCGTTTTTTTGAGATTACTCTGCCTGCTTTTTTTGCTACCGATGCGCTCATTCTTGTAGGCTTGTCCAT
TCTCTTTATTCGGCGCTTGTGGGATTCAAAGCTTCGTTTTATTTCATTGCAAACCGATTTTTTCCCGCTTTTCCTGCTTC
TCGGTATTGTGCTTGTTGGCATTAGTATGCGCTATATTGCTAAAGTGAATGTTATGCCAGTGCACGACCAAATGATTGCT
ATGATGGATGGTAATTTCTCGGTTATGGGCGATATAGATCCGCTCTTTTATATTCACCTCTTTTTAGTGAGTGTGCTGGT
GGCTTATTTTCCTTTTAGTAAGCTGATGCACATGGGAGCAATTTTTTTAAGCCCAACACGTAATCTCGGCAATACAAGTC
GCGTTAAGCGTCATGTTAATCCATGGAACCCTGAAATGAAAATCAGGACATATGCCGAATATGAGGATGATTATCGGGAA
AAGATGAAAAAAGCTGGCTTACCGGTTGAAAAGCAATAA

Upstream 100 bases:

>100_bases
AAGCTTTTGATAGTTACATGATGCATCGTGAAACAATAAGCCAGCTTAAGGTTGATGAAATGAAGCGCCAACTCTTTATG
CAGTTACGGAGGGCTGAAGC

Downstream 100 bases:

>100_bases
CTATGTCGAAATACGCACCTAAAGTATCGGAACTCAATGAGGAGTTCGAGAAAAAGAAGCCGAATATTCTTAAAGAGAAT
TATTCAGGTAAGGAGTGGTG

Product: DsrM protein

Products: NA

Alternate protein names: Hme subunit C [H]

Number of amino acids: Translated: 332; Mature: 331

Protein sequence:

>332_residues
MTKKVLMPLLMVFVLCLIPYIGVKYAGLTTLFAVIIPLASLSILLVGFALRLVDWLRRPVPFRIPTTCGQEKSFNWVKHD
QLDNPHNWWQVVLRVLGEVLLFRSLFRNKKAELHDGQKLTYGSSKWLWFAGLLFHWSMLIIVLRHTKFFFVTEPAFATFL
DHADRFFEITLPAFFATDALILVGLSILFIRRLWDSKLRFISLQTDFFPLFLLLGIVLVGISMRYIAKVNVMPVHDQMIA
MMDGNFSVMGDIDPLFYIHLFLVSVLVAYFPFSKLMHMGAIFLSPTRNLGNTSRVKRHVNPWNPEMKIRTYAEYEDDYRE
KMKKAGLPVEKQ

Sequences:

>Translated_332_residues
MTKKVLMPLLMVFVLCLIPYIGVKYAGLTTLFAVIIPLASLSILLVGFALRLVDWLRRPVPFRIPTTCGQEKSFNWVKHD
QLDNPHNWWQVVLRVLGEVLLFRSLFRNKKAELHDGQKLTYGSSKWLWFAGLLFHWSMLIIVLRHTKFFFVTEPAFATFL
DHADRFFEITLPAFFATDALILVGLSILFIRRLWDSKLRFISLQTDFFPLFLLLGIVLVGISMRYIAKVNVMPVHDQMIA
MMDGNFSVMGDIDPLFYIHLFLVSVLVAYFPFSKLMHMGAIFLSPTRNLGNTSRVKRHVNPWNPEMKIRTYAEYEDDYRE
KMKKAGLPVEKQ
>Mature_331_residues
TKKVLMPLLMVFVLCLIPYIGVKYAGLTTLFAVIIPLASLSILLVGFALRLVDWLRRPVPFRIPTTCGQEKSFNWVKHDQ
LDNPHNWWQVVLRVLGEVLLFRSLFRNKKAELHDGQKLTYGSSKWLWFAGLLFHWSMLIIVLRHTKFFFVTEPAFATFLD
HADRFFEITLPAFFATDALILVGLSILFIRRLWDSKLRFISLQTDFFPLFLLLGIVLVGISMRYIAKVNVMPVHDQMIAM
MDGNFSVMGDIDPLFYIHLFLVSVLVAYFPFSKLMHMGAIFLSPTRNLGNTSRVKRHVNPWNPEMKIRTYAEYEDDYREK
MKKAGLPVEKQ

Specific function: Has menaquinol-oxidizing activity. HmeC and hmeD subunits may together mediate electron transfer from menaquinol to an unidentified electron acceptor on the cytoplasmic side of the membrane [H]

COG id: COG2181

COG function: function code C; Nitrate reductase gamma subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003816 [H]

Pfam domain/function: PF02665 Nitrate_red_gam [H]

EC number: NA

Molecular weight: Translated: 38598; Mature: 38466

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKKVLMPLLMVFVLCLIPYIGVKYAGLTTLFAVIIPLASLSILLVGFALRLVDWLRRPV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PFRIPTTCGQEKSFNWVKHDQLDNPHNWWQVVLRVLGEVLLFRSLFRNKKAELHDGQKLT
CCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE
YGSSKWLWFAGLLFHWSMLIIVLRHTKFFFVTEPAFATFLDHADRFFEITLPAFFATDAL
CCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHEEEEHHHHHHHHHH
ILVGLSILFIRRLWDSKLRFISLQTDFFPLFLLLGIVLVGISMRYIAKVNVMPVHDQMIA
HHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHEECEEECHHHHHH
MMDGNFSVMGDIDPLFYIHLFLVSVLVAYFPFSKLMHMGAIFLSPTRNLGNTSRVKRHVN
HCCCCEEEEECCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHEECCCCCCCCHHHHHHCCC
PWNPEMKIRTYAEYEDDYREKMKKAGLPVEKQ
CCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TKKVLMPLLMVFVLCLIPYIGVKYAGLTTLFAVIIPLASLSILLVGFALRLVDWLRRPV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PFRIPTTCGQEKSFNWVKHDQLDNPHNWWQVVLRVLGEVLLFRSLFRNKKAELHDGQKLT
CCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE
YGSSKWLWFAGLLFHWSMLIIVLRHTKFFFVTEPAFATFLDHADRFFEITLPAFFATDAL
CCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHEEEEHHHHHHHHHH
ILVGLSILFIRRLWDSKLRFISLQTDFFPLFLLLGIVLVGISMRYIAKVNVMPVHDQMIA
HHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHEECEEECHHHHHH
MMDGNFSVMGDIDPLFYIHLFLVSVLVAYFPFSKLMHMGAIFLSPTRNLGNTSRVKRHVN
HCCCCEEEEECCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHEECCCCCCCCHHHHHHCCC
PWNPEMKIRTYAEYEDDYREKMKKAGLPVEKQ
CCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475; 11952791 [H]