Definition Chlorobium chlorochromatii CaD3 chromosome, complete genome.
Accession NC_007514
Length 2,572,079

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The map label for this gene is 78189902

Identifier: 78189902

GI number: 78189902

Start: 2480192

End: 2480602

Strand: Reverse

Name: 78189902

Synonym: Cag_1949

Alternate gene names: NA

Gene position: 2480602-2480192 (Counterclockwise)

Preceding gene: 78189903

Following gene: 78189901

Centisome position: 96.44

GC content: 44.53

Gene sequence:

>411_bases
ATGGAGCGCTTGTTGGTGCTTTATGGTGGCAAAATAGCCGCAAATTCGTTTGTTACCGATTCGCTCTCTAAAGCACTTGC
CGATGTATTGCACTATGGGGGCAAAGAGTGCAATGAGCTTTCGGAAGCCTTAAAAGATGTTACCTGCATTTTAGCGGTGC
AAGCCATGCCACCCTCACAAACGCTTGCACTTTTTTTTGAGTTACCCGCTGTTCTTCGGGATTATGCCGTTAAAGGTGCT
CCCAAACAACTGTTGAAAGAATCTGATATGGATGCGTTGCAAAAACGGCTTGAGGAGTTAACTCTCAAAGCTTTTGATAG
TTACATGATGCATCGTGAAACAATAAGCCAGCTTAAGGTTGATGAAATGAAGCGCCAACTCTTTATGCAGTTACGGAGGG
CTGAAGCATGA

Upstream 100 bases:

>100_bases
CATCAAGTAAATAGCTGGTTTTAAGGTTGCCCGCAATTACATGAGCCACTTCTGGAACAACGCTATAACCGAGCATCAGC
AAGCAATTCTCTCTTTATGG

Downstream 100 bases:

>100_bases
CAAAAAAAGTTCTCATGCCGCTCCTTATGGTTTTTGTGCTTTGCTTGATTCCCTACATTGGAGTTAAGTATGCAGGGCTT
ACAACCCTTTTTGCGGTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MERLLVLYGGKIAANSFVTDSLSKALADVLHYGGKECNELSEALKDVTCILAVQAMPPSQTLALFFELPAVLRDYAVKGA
PKQLLKESDMDALQKRLEELTLKAFDSYMMHRETISQLKVDEMKRQLFMQLRRAEA

Sequences:

>Translated_136_residues
MERLLVLYGGKIAANSFVTDSLSKALADVLHYGGKECNELSEALKDVTCILAVQAMPPSQTLALFFELPAVLRDYAVKGA
PKQLLKESDMDALQKRLEELTLKAFDSYMMHRETISQLKVDEMKRQLFMQLRRAEA
>Mature_136_residues
MERLLVLYGGKIAANSFVTDSLSKALADVLHYGGKECNELSEALKDVTCILAVQAMPPSQTLALFFELPAVLRDYAVKGA
PKQLLKESDMDALQKRLEELTLKAFDSYMMHRETISQLKVDEMKRQLFMQLRRAEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15339; Mature: 15339

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERLLVLYGGKIAANSFVTDSLSKALADVLHYGGKECNELSEALKDVTCILAVQAMPPSQ
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHH
TLALFFELPAVLRDYAVKGAPKQLLKESDMDALQKRLEELTLKAFDSYMMHRETISQLKV
HHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DEMKRQLFMQLRRAEA
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MERLLVLYGGKIAANSFVTDSLSKALADVLHYGGKECNELSEALKDVTCILAVQAMPPSQ
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHH
TLALFFELPAVLRDYAVKGAPKQLLKESDMDALQKRLEELTLKAFDSYMMHRETISQLKV
HHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DEMKRQLFMQLRRAEA
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA