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The map label for this gene is rpmI

Identifier: 78189669

GI number: 78189669

Start: 2226194

End: 2226388

Strand: Reverse

Name: rpmI

Synonym: Cag_1713

Alternate gene names: 78189669

Gene position: 2226388-2226194 (Counterclockwise)

Preceding gene: 78189670

Following gene: 78189668

Centisome position: 86.56

GC content: 46.67

Gene sequence:

>195_bases
ATGCCAAAAATGAAATCGCACCGCGGCGCTTGCAAGCGGTTTAAAGTAACAGCTTCTGGAAAAATTAAGCGTGAGCGTAT
GAACGGTTCTCACAACCTCGAAAAAAAGAATCGCAAACGCTCCCGTCGTCTCCACCAGTCAACCCTGCTTGAAGGCACCA
AAGCCAAGCAAATTAAGCAGATGATTCAGGGATAA

Upstream 100 bases:

>100_bases
GTATTTCCACAACATGGTAGCTCTTGCTTGCAAACAAGAGTAAACCTGCTGTTGAAGAAATCAACCCCTTGTTTTCCCAT
AAACCATATAAAGGACGACC

Downstream 100 bases:

>100_bases
TTTTTTTAACATTTTAATTACACAATCACAATGCCTAAAGCCAATAATGCCGTAGCTTCACGAGCACGGAGAAAAAGAAT
ATTAAAGAAAGCCAAAGGAT

Product: 50S ribosomal protein L35

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 64; Mature: 63

Protein sequence:

>64_residues
MPKMKSHRGACKRFKVTASGKIKRERMNGSHNLEKKNRKRSRRLHQSTLLEGTKAKQIKQMIQG

Sequences:

>Translated_64_residues
MPKMKSHRGACKRFKVTASGKIKRERMNGSHNLEKKNRKRSRRLHQSTLLEGTKAKQIKQMIQG
>Mature_63_residues
PKMKSHRGACKRFKVTASGKIKRERMNGSHNLEKKNRKRSRRLHQSTLLEGTKAKQIKQMIQG

Specific function: Unknown

COG id: COG0291

COG function: function code J; Ribosomal protein L35

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L35P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL35_CHLCH (Q3APW1)

Other databases:

- EMBL:   CP000108
- RefSeq:   YP_380007.1
- ProteinModelPortal:   Q3APW1
- SMR:   Q3APW1
- STRING:   Q3APW1
- GeneID:   3746979
- GenomeReviews:   CP000108_GR
- KEGG:   cch:Cag_1713
- eggNOG:   NOG87922
- HOGENOM:   HBG734125
- OMA:   MVHSGDF
- ProtClustDB:   PRK00172
- BioCyc:   CCHL340177:CAG_1713-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00514
- InterPro:   IPR021137
- InterPro:   IPR018265
- InterPro:   IPR001706
- PRINTS:   PR00064
- TIGRFAMs:   TIGR00001

Pfam domain/function: PF01632 Ribosomal_L35p

EC number: NA

Molecular weight: Translated: 7460; Mature: 7329

Theoretical pI: Translated: 12.35; Mature: 12.35

Prosite motif: PS00936 RIBOSOMAL_L35

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKMKSHRGACKRFKVTASGKIKRERMNGSHNLEKKNRKRSRRLHQSTLLEGTKAKQIKQ
CCCCCCCCCHHHHEECCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
MIQG
HHCC
>Mature Secondary Structure 
PKMKSHRGACKRFKVTASGKIKRERMNGSHNLEKKNRKRSRRLHQSTLLEGTKAKQIKQ
CCCCCCCCHHHHEECCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
MIQG
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA