Click here to switch to the map view.

The map label for this gene is 78189575

Identifier: 78189575

GI number: 78189575

Start: 2115506

End: 2116627

Strand: Reverse

Name: 78189575

Synonym: Cag_1617

Alternate gene names: NA

Gene position: 2116627-2115506 (Counterclockwise)

Preceding gene: 78189578

Following gene: 78189574

Centisome position: 82.29

GC content: 49.91

Gene sequence:

>1122_bases
ATGAAAATTGTGCAGTTCGTTGCTATGCTCTTGCTGTTTGCTGGAGTTAATGGCGCCGTGGTCTATCGCTTGTGGCGCTT
AATGCCGCCGTTGCGTTGGTTTCGGGGTAGTGTAACGCTGCTGTTGCTTGCTGTTATTGCGGCGCCTTTTGTGGTGATGG
CGTGGGGCAATGCGCTGCCGTTACCGTTGGTGTCGTTGCTTTACATGGTTGGTTTGTCGTGGCTTATTTTGCTTATCTAT
CTCATCTTGCTTTTTCTGCTTATAGATGGGTTGAGTTTGCTTGGCTTTTTTGGGGTACAACGCTTAAAGTCGCTAAAGTT
GTGGACGCACGAAAGTTGGGTTGGCACTGTTGGTGTGGTGGTTTTGATGGCGGTGCTTGCCGTTTATGGCAATTATAATT
ATCACCAAAAAGAGCGCGTTGAGCTTACTATGCGTGTTGAAAAGGCAATGGCGCAACCTTTGCGGATAGTGGTAGTGAGC
GATCTTCATCTTGGTTACAGTATTGGGCGTGAGGAGCTTGAGCGGTGGGTTGTGCTTATTAACCGTGAAGAACCTGATGT
GGTGTTGCTTGTGGGGGATGTGATTGATACTTCCCTGCGTCCGTTGGAGGTTGAGCGAATGGCTGAGGTGTTGCGTCGGC
TTTCGAGCCGTTACGGTGTGTATGCGGTGGCGGGTAATCATGAGCATTACGCCACGCTTGCCAAAAGTGCGCCATTTTTT
AGCGATGCGGGAATTCGGTTGTTGCGGGATGAAGTGCTGTTGATTGATAATCGTTGCTATTTTGTAGGGCGCGATGATTA
TATGAATAAGCAGCGGAAGCCGTTAAGCGTGTTGCTCTCAGGTGTTGATGTGGCAAAGCCTATTGTATTGCTTGATCATC
AGCCGCGTGCGCTTGGTGAGGCGCGTGCTGCGGGTGCTGATATCCATTTTGCGGGGCATACGCATCGGGGGCAAATTTGG
CCAATATCGTTGCTGGTGGAGCAGATGTATGAGCAGGCGTATGGTTATCGTCGTTTTGGCGCTATGCAAAGCTACGTTTC
GTCGGGCTTAGGTATTTGGGGTGGCAAGTTCCGTATTGGCACAAAGTCGGAATATGTTGTGGTAACGTTGCAGGGGAGGT
AA

Upstream 100 bases:

>100_bases
TAAATATCTCCTATTTCTCGCTTTTTACAGATTTTTCACTGTAACACCAAATATTCTCCCTCTTAAACATTTCCTTCCTC
TCCTCTAACAAAGTGCTTGT

Downstream 100 bases:

>100_bases
GTGGGGCTTTGTACTGTCATTTTGCTCCCATGTTCTCTAAACTCATTTCCCCTTGAAAATCTGTACTTTAGCGGCATCGT
AGCTTTTGAAACAATCTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MKIVQFVAMLLLFAGVNGAVVYRLWRLMPPLRWFRGSVTLLLLAVIAAPFVVMAWGNALPLPLVSLLYMVGLSWLILLIY
LILLFLLIDGLSLLGFFGVQRLKSLKLWTHESWVGTVGVVVLMAVLAVYGNYNYHQKERVELTMRVEKAMAQPLRIVVVS
DLHLGYSIGREELERWVVLINREEPDVVLLVGDVIDTSLRPLEVERMAEVLRRLSSRYGVYAVAGNHEHYATLAKSAPFF
SDAGIRLLRDEVLLIDNRCYFVGRDDYMNKQRKPLSVLLSGVDVAKPIVLLDHQPRALGEARAAGADIHFAGHTHRGQIW
PISLLVEQMYEQAYGYRRFGAMQSYVSSGLGIWGGKFRIGTKSEYVVVTLQGR

Sequences:

>Translated_373_residues
MKIVQFVAMLLLFAGVNGAVVYRLWRLMPPLRWFRGSVTLLLLAVIAAPFVVMAWGNALPLPLVSLLYMVGLSWLILLIY
LILLFLLIDGLSLLGFFGVQRLKSLKLWTHESWVGTVGVVVLMAVLAVYGNYNYHQKERVELTMRVEKAMAQPLRIVVVS
DLHLGYSIGREELERWVVLINREEPDVVLLVGDVIDTSLRPLEVERMAEVLRRLSSRYGVYAVAGNHEHYATLAKSAPFF
SDAGIRLLRDEVLLIDNRCYFVGRDDYMNKQRKPLSVLLSGVDVAKPIVLLDHQPRALGEARAAGADIHFAGHTHRGQIW
PISLLVEQMYEQAYGYRRFGAMQSYVSSGLGIWGGKFRIGTKSEYVVVTLQGR
>Mature_373_residues
MKIVQFVAMLLLFAGVNGAVVYRLWRLMPPLRWFRGSVTLLLLAVIAAPFVVMAWGNALPLPLVSLLYMVGLSWLILLIY
LILLFLLIDGLSLLGFFGVQRLKSLKLWTHESWVGTVGVVVLMAVLAVYGNYNYHQKERVELTMRVEKAMAQPLRIVVVS
DLHLGYSIGREELERWVVLINREEPDVVLLVGDVIDTSLRPLEVERMAEVLRRLSSRYGVYAVAGNHEHYATLAKSAPFF
SDAGIRLLRDEVLLIDNRCYFVGRDDYMNKQRKPLSVLLSGVDVAKPIVLLDHQPRALGEARAAGADIHFAGHTHRGQIW
PISLLVEQMYEQAYGYRRFGAMQSYVSSGLGIWGGKFRIGTKSEYVVVTLQGR

Specific function: Unknown

COG id: COG1408

COG function: function code R; Predicted phosphohydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallophosphoesterase superfamily [H]

Homologues:

Organism=Homo sapiens, GI210031196, Length=385, Percent_Identity=27.5324675324675, Blast_Score=102, Evalue=8e-22,
Organism=Homo sapiens, GI210031210, Length=283, Percent_Identity=29.6819787985866, Blast_Score=99, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI115535030, Length=262, Percent_Identity=25.1908396946565, Blast_Score=81, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI115535028, Length=336, Percent_Identity=22.3214285714286, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71996034, Length=245, Percent_Identity=22.8571428571429, Blast_Score=73, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004843 [H]

Pfam domain/function: PF00149 Metallophos [H]

EC number: NA

Molecular weight: Translated: 42066; Mature: 42066

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIVQFVAMLLLFAGVNGAVVYRLWRLMPPLRWFRGSVTLLLLAVIAAPFVVMAWGNALP
CCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LPLVSLLYMVGLSWLILLIYLILLFLLIDGLSLLGFFGVQRLKSLKLWTHESWVGTVGVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
VLMAVLAVYGNYNYHQKERVELTMRVEKAMAQPLRIVVVSDLHLGYSIGREELERWVVLI
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHCCHHHHHHEEEEE
NREEPDVVLLVGDVIDTSLRPLEVERMAEVLRRLSSRYGVYAVAGNHEHYATLAKSAPFF
ECCCCCEEEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCC
SDAGIRLLRDEVLLIDNRCYFVGRDDYMNKQRKPLSVLLSGVDVAKPIVLLDHQPRALGE
CCCCHHHHHCCEEEEECEEEEEECHHHCCCCCCCHHHHHHCCHHHCCEEEECCCCHHHHH
ARAAGADIHFAGHTHRGQIWPISLLVEQMYEQAYGYRRFGAMQSYVSSGLGIWGGKFRIG
HHHCCCCEEECCCCCCCCEEHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCEEEEC
TKSEYVVVTLQGR
CCCCEEEEEEECC
>Mature Secondary Structure
MKIVQFVAMLLLFAGVNGAVVYRLWRLMPPLRWFRGSVTLLLLAVIAAPFVVMAWGNALP
CCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LPLVSLLYMVGLSWLILLIYLILLFLLIDGLSLLGFFGVQRLKSLKLWTHESWVGTVGVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
VLMAVLAVYGNYNYHQKERVELTMRVEKAMAQPLRIVVVSDLHLGYSIGREELERWVVLI
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHCCHHHHHHEEEEE
NREEPDVVLLVGDVIDTSLRPLEVERMAEVLRRLSSRYGVYAVAGNHEHYATLAKSAPFF
ECCCCCEEEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCC
SDAGIRLLRDEVLLIDNRCYFVGRDDYMNKQRKPLSVLLSGVDVAKPIVLLDHQPRALGE
CCCCHHHHHCCEEEEECEEEEEECHHHCCCCCCCHHHHHHCCHHHCCEEEECCCCHHHHH
ARAAGADIHFAGHTHRGQIWPISLLVEQMYEQAYGYRRFGAMQSYVSSGLGIWGGKFRIG
HHHCCCCEEECCCCCCCCEEHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCEEEEC
TKSEYVVVTLQGR
CCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10688204 [H]