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The map label for this gene is bchD [H]

Identifier: 78189578

GI number: 78189578

Start: 2117852

End: 2119717

Strand: Reverse

Name: bchD [H]

Synonym: Cag_1620

Alternate gene names: 78189578

Gene position: 2119717-2117852 (Counterclockwise)

Preceding gene: 78189579

Following gene: 78189575

Centisome position: 82.41

GC content: 49.95

Gene sequence:

>1866_bases
ATGATAGCCTTTACCGATATTGTAGGTATGGATCTGGCAAAGCAAGCGTTAATGCTGCTTGCTGTTGATCCTGAACTTGG
CGGAGTGGTGATTCCTTCGGCTGTAGGGTCGGGGAAATCAACATTAGCGCGTGCTTTTGCGGATATTCTTCTGCCTGGCA
CGCCTTTTGTGGAACTTCCGCTTAATGTTACTGAAGATCGCCTGATTGGCGGTGTTGATCTTGAAGCTACGCTTGCAAGC
GGGCAGCGCGTGGTGCAGCATGGTGTGCTTTCCAAAGCGCATGGTGGTGTGCTTTACGTTGATTCGCTCAGTTTGCTTGA
TAGTTCTGCCGTTTCTCACATTATGGACGCAATGTCGCGTGGCGAGGTGCTTGTTGAGCGTGAAGGGTTAAGCGAAGTGC
ATCCTGCAAAGTTCATGTTAGTTGGCACATACGATCCTACGGATGGCGAAGTGCGCATGGGTTTGCTTGACCGCATTGGT
ATTATTGCGCCCTTTACCGCGCAAAACGATTACCGTGCTCGCAAAAAAATTGTGAGCGTTGTGCTTGGTGAGCGCGATGC
TGAGGATGTGCAGGATGAGCTCAATATGCTTGTAGGCTTTATTAAAGCCGCACGCGAGCAATTGCAACACGTTGCCATTT
CGGACGATAAAATTCGCGCCCTTATTCAAACCGCGTTAAGTCTTGGGGTTGAAGGGAACCGTGCCGATATTTTTGCCATT
CGTGCCGCTCTTGCATCTGCTGCGCTTGCACAGCGTAATGATGTGGATGAAGAGGATATGAAGCAGGCAATTAAGTTAGT
ATTGGTGCCTCGTGCAACTCGAATGCCAGATCGTGAAGCCGATGCGGCTGATGCGCCACCGCAAGAGGAGATGCCTCCAC
CGCCCGAAGAGACGGATATGGAAGATGAGGAAGCTCCAGCCGATGCGCCCGATAGCGATGGTGATGCTGAAGAAGAGAAG
GAAGAGACGCCAGACATGCTCGAAGAGTTGATGATGGAAGCGGTAGAAACCGAATTACCCGACAACATTCTCAACATTTC
ACTTGCCTCAAAAAAGAAAACCACAACGGGTAGCCGTGGTGAAGCGCTAAACTTTAAGCGTGGACGCTTTGTGCGTTCAC
AACCGGGTGAAGTGCGCAGTGGCAAGGTGGCACTTATTCCAACGCTTATTTCTGCCGCACCGTGGCAGGAAGCACGTCGC
CGCGATAGCAAGCTTGCAGGCAAGTCGAAGAGCGCCCTTATTATCACCAAAGATGATGTTAAAATTAAGCGCTTCCGCGA
CAAATCGGGTACGCTCTTTATTTTTATGGTGGATGCCTCAGGCTCTATGGCGCTCAACCGTATGCGTCAAGCCAAAGGTG
CCGTTGCCAGCTTACTGCAAAATGCTTACGTGCATCGCGATCAAGTTGCTTTAATCTCCTTCCGAGGCAAACAAGCCCAA
GTGCTGCTACCGCCATCGCAGAGCGTTGACCGTGCAAAACGAGAGCTTGATGTGCTGCCAACGGGCGGAGGAACACCGCT
TGCCTCAGCGCTCTTTGTTGGGTGGGAAACTGCTAAACAAGCACGGGTAAAAGGCATTTCGCAAATTATGTTTGTGCTTA
TTACCGATGGACGTGGCAATATTGGTTTGCAATCTTCTTTTGATCCTACGGCAGAAAAGCCAAGCAAAGAGGAGCTTGAA
AAAGAGGTGGAAGCACTTTCGGCATCCATTTCAGCCGATGGCATTGCCGCAATTGTAATTGATACGCAAATGAACTATCT
CTCACGAGGCGAAGCGCCAAAACTTGCGCAACGGCTTAATGGGCGATATTTTTACTTGCCGAATGCAAAGGCTGATCAAA
TTGTTGAAGCTGCATTGAGTTTTTAA

Upstream 100 bases:

>100_bases
TTCGCCACCGTTTGCGCAAGGATCCTCTTGAAACCCTTGATGCTGGTGAAAAAATTGAACGTGAAATTGCAAAAGTCCTC
GGAGAAGCAGAAGCCGTATA

Downstream 100 bases:

>100_bases
ACTCGCATTTATATATCTACGTTTTTAAAGAGGTTGTCTTGATTGTTCTAAGGCAACCTCTTTTTTTGTTGTGTGGATGG
GGGGAACTTGCATAAAACGA

Product: magnesium chelatase ATPase subunit D

Products: NA

Alternate protein names: Mg-chelatase subunit D; Mg-protoporphyrin IX chelatase [H]

Number of amino acids: Translated: 621; Mature: 621

Protein sequence:

>621_residues
MIAFTDIVGMDLAKQALMLLAVDPELGGVVIPSAVGSGKSTLARAFADILLPGTPFVELPLNVTEDRLIGGVDLEATLAS
GQRVVQHGVLSKAHGGVLYVDSLSLLDSSAVSHIMDAMSRGEVLVEREGLSEVHPAKFMLVGTYDPTDGEVRMGLLDRIG
IIAPFTAQNDYRARKKIVSVVLGERDAEDVQDELNMLVGFIKAAREQLQHVAISDDKIRALIQTALSLGVEGNRADIFAI
RAALASAALAQRNDVDEEDMKQAIKLVLVPRATRMPDREADAADAPPQEEMPPPPEETDMEDEEAPADAPDSDGDAEEEK
EETPDMLEELMMEAVETELPDNILNISLASKKKTTTGSRGEALNFKRGRFVRSQPGEVRSGKVALIPTLISAAPWQEARR
RDSKLAGKSKSALIITKDDVKIKRFRDKSGTLFIFMVDASGSMALNRMRQAKGAVASLLQNAYVHRDQVALISFRGKQAQ
VLLPPSQSVDRAKRELDVLPTGGGTPLASALFVGWETAKQARVKGISQIMFVLITDGRGNIGLQSSFDPTAEKPSKEELE
KEVEALSASISADGIAAIVIDTQMNYLSRGEAPKLAQRLNGRYFYLPNAKADQIVEAALSF

Sequences:

>Translated_621_residues
MIAFTDIVGMDLAKQALMLLAVDPELGGVVIPSAVGSGKSTLARAFADILLPGTPFVELPLNVTEDRLIGGVDLEATLAS
GQRVVQHGVLSKAHGGVLYVDSLSLLDSSAVSHIMDAMSRGEVLVEREGLSEVHPAKFMLVGTYDPTDGEVRMGLLDRIG
IIAPFTAQNDYRARKKIVSVVLGERDAEDVQDELNMLVGFIKAAREQLQHVAISDDKIRALIQTALSLGVEGNRADIFAI
RAALASAALAQRNDVDEEDMKQAIKLVLVPRATRMPDREADAADAPPQEEMPPPPEETDMEDEEAPADAPDSDGDAEEEK
EETPDMLEELMMEAVETELPDNILNISLASKKKTTTGSRGEALNFKRGRFVRSQPGEVRSGKVALIPTLISAAPWQEARR
RDSKLAGKSKSALIITKDDVKIKRFRDKSGTLFIFMVDASGSMALNRMRQAKGAVASLLQNAYVHRDQVALISFRGKQAQ
VLLPPSQSVDRAKRELDVLPTGGGTPLASALFVGWETAKQARVKGISQIMFVLITDGRGNIGLQSSFDPTAEKPSKEELE
KEVEALSASISADGIAAIVIDTQMNYLSRGEAPKLAQRLNGRYFYLPNAKADQIVEAALSF
>Mature_621_residues
MIAFTDIVGMDLAKQALMLLAVDPELGGVVIPSAVGSGKSTLARAFADILLPGTPFVELPLNVTEDRLIGGVDLEATLAS
GQRVVQHGVLSKAHGGVLYVDSLSLLDSSAVSHIMDAMSRGEVLVEREGLSEVHPAKFMLVGTYDPTDGEVRMGLLDRIG
IIAPFTAQNDYRARKKIVSVVLGERDAEDVQDELNMLVGFIKAAREQLQHVAISDDKIRALIQTALSLGVEGNRADIFAI
RAALASAALAQRNDVDEEDMKQAIKLVLVPRATRMPDREADAADAPPQEEMPPPPEETDMEDEEAPADAPDSDGDAEEEK
EETPDMLEELMMEAVETELPDNILNISLASKKKTTTGSRGEALNFKRGRFVRSQPGEVRSGKVALIPTLISAAPWQEARR
RDSKLAGKSKSALIITKDDVKIKRFRDKSGTLFIFMVDASGSMALNRMRQAKGAVASLLQNAYVHRDQVALISFRGKQAQ
VLLPPSQSVDRAKRELDVLPTGGGTPLASALFVGWETAKQARVKGISQIMFVLITDGRGNIGLQSSFDPTAEKPSKEELE
KEVEALSASISADGIAAIVIDTQMNYLSRGEAPKLAQRLNGRYFYLPNAKADQIVEAALSF

Specific function: Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX [H]

COG id: COG1240

COG function: function code H; Mg-chelatase subunit ChlD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 VWFA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR011776
- InterPro:   IPR000523
- InterPro:   IPR002035 [H]

Pfam domain/function: PF01078 Mg_chelatase; PF00092 VWA [H]

EC number: =6.6.1.1 [H]

Molecular weight: Translated: 67099; Mature: 67099

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAFTDIVGMDLAKQALMLLAVDPELGGVVIPSAVGSGKSTLARAFADILLPGTPFVELP
CEEEHHHHHHHHHHHHHEEEEECCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEC
LNVTEDRLIGGVDLEATLASGQRVVQHGVLSKAHGGVLYVDSLSLLDSSAVSHIMDAMSR
CCCCCCCEECCCCHHHHHHCCHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHC
GEVLVEREGLSEVHPAKFMLVGTYDPTDGEVRMGLLDRIGIIAPFTAQNDYRARKKIVSV
CCEEEEECCCCCCCCCEEEEEECCCCCCCCEEHHHHHHCCEEECCCCCCHHHHHHHHHHH
VLGERDAEDVQDELNMLVGFIKAAREQLQHVAISDDKIRALIQTALSLGVEGNRADIFAI
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHH
RAALASAALAQRNDVDEEDMKQAIKLVLVPRATRMPDREADAADAPPQEEMPPPPEETDM
HHHHHHHHHHHCCCCCHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EDEEAPADAPDSDGDAEEEKEETPDMLEELMMEAVETELPDNILNISLASKKKTTTGSRG
CCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCC
EALNFKRGRFVRSQPGEVRSGKVALIPTLISAAPWQEARRRDSKLAGKSKSALIITKDDV
CCCCCCCCCEECCCCCCCCCCCEEEEHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCC
KIKRFRDKSGTLFIFMVDASGSMALNRMRQAKGAVASLLQNAYVHRDQVALISFRGKQAQ
EEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEE
VLLPPSQSVDRAKRELDVLPTGGGTPLASALFVGWETAKQARVKGISQIMFVLITDGRGN
EEECCCCHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCC
IGLQSSFDPTAEKPSKEELEKEVEALSASISADGIAAIVIDTQMNYLSRGEAPKLAQRLN
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHCCCCHHHHHHHC
GRYFYLPNAKADQIVEAALSF
CCEEECCCCCHHHHHHHHHCC
>Mature Secondary Structure
MIAFTDIVGMDLAKQALMLLAVDPELGGVVIPSAVGSGKSTLARAFADILLPGTPFVELP
CEEEHHHHHHHHHHHHHEEEEECCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEC
LNVTEDRLIGGVDLEATLASGQRVVQHGVLSKAHGGVLYVDSLSLLDSSAVSHIMDAMSR
CCCCCCCEECCCCHHHHHHCCHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHC
GEVLVEREGLSEVHPAKFMLVGTYDPTDGEVRMGLLDRIGIIAPFTAQNDYRARKKIVSV
CCEEEEECCCCCCCCCEEEEEECCCCCCCCEEHHHHHHCCEEECCCCCCHHHHHHHHHHH
VLGERDAEDVQDELNMLVGFIKAAREQLQHVAISDDKIRALIQTALSLGVEGNRADIFAI
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHH
RAALASAALAQRNDVDEEDMKQAIKLVLVPRATRMPDREADAADAPPQEEMPPPPEETDM
HHHHHHHHHHHCCCCCHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EDEEAPADAPDSDGDAEEEKEETPDMLEELMMEAVETELPDNILNISLASKKKTTTGSRG
CCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCC
EALNFKRGRFVRSQPGEVRSGKVALIPTLISAAPWQEARRRDSKLAGKSKSALIITKDDV
CCCCCCCCCEECCCCCCCCCCCEEEEHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEECCC
KIKRFRDKSGTLFIFMVDASGSMALNRMRQAKGAVASLLQNAYVHRDQVALISFRGKQAQ
EEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEE
VLLPPSQSVDRAKRELDVLPTGGGTPLASALFVGWETAKQARVKGISQIMFVLITDGRGN
EEECCCCHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCC
IGLQSSFDPTAEKPSKEELEKEVEALSASISADGIAAIVIDTQMNYLSRGEAPKLAQRLN
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHCCCCHHHHHHHC
GRYFYLPNAKADQIVEAALSF
CCEEECCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10976061; 12093901 [H]