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The map label for this gene is hdrC [H]

Identifier: 78189542

GI number: 78189542

Start: 2064475

End: 2065653

Strand: Reverse

Name: hdrC [H]

Synonym: Cag_1582

Alternate gene names: 78189542

Gene position: 2065653-2064475 (Counterclockwise)

Preceding gene: 78189543

Following gene: 78189541

Centisome position: 80.31

GC content: 44.44

Gene sequence:

>1179_bases
ATGGCTCAAAAAGCATTTACGCCTGACATTAAGTTTATACGGGAGCTGAAAGAGGCTGGCGCCGACACCATGAAAAAGTG
TTACCAGTGTGCCACCTGTTCAGTTGTGTGCCCTCTTTCGCCGAACGACCGTCCCTTTCCTCGCAAAGAGATGGTGATGG
CACAGTGGGGTTTAAAAGATGAGTTGCTTAAAAGCGCTGACATTTGGCTTTGCCACAATTGTAACGACTGCTCAAAACAT
TGCCCTCGTGGTGCACGTCCGGGCGATGTGTTAGCAATTTTGCGCAAAAGCGTTATTCAGGAAAATGCCTTCCCCGGTTT
TATGGGTAAGCTTGTTGGCGATCCCAAAAACATTTGGCAGGCGCTCGCAATTCCAGTCATCTTTTTCTTGATTGTGTTAG
CCGTTACGGGTCATTTAAATATTCCCGAAGGAGAGGTGATTTTCCGTAAGTTTTTCCCCGTGCATTACATTGATATGGTG
TTTGTGCCCCTTTCAACGCTCTCTATGCTGCTCTTTGCCGTGAGCATTAAACGGTTTTGGGGTAACATGGTGGCAGCCTC
AGGCAATGTAAAGCCGAAGCAAGAGTTTATGCCAAGCCTTATTGAGACGCTTAAAGAGATTATGTCGCACTCAAAGTTCC
GTAAATGCGGTGAAAATCCAGAACGTACAGGAGCACACTCGTTGGTCTTTTTTGGTTTTATTGGACTTGCCATTACTACT
GCATGGGCTGTGTTTAATCTCTATGTGTTGCAGTGGGAATCACCCTATCCTGTAGATGATCCCGAAATTCTGGCGCTTTT
TGGTGGTTCAACCGTTGTTCCATGGATTTTGCGCATTGTGTTTAAACTGTTAGCAAATGCAAGTTCGCTCTTCCTTTTAA
TTGGTGGCGTAATGATTGTTCAAGCCCGCTTAAAAGAGCGTTCATTTGAAACCATTTCATCATCGTTTGATTGGACGTTT
ATTACGATGGTGTTGTTGGTAGGAGCATCAGGCTTTCTTGCACAGCTTATGCGTGTAACTCATTTTCCTGCCGTGTTAGC
CTATGGTACCTATTTTATGCACCTTGTGTTTGTTTTCTACATTATCATCTACATGCCTTACTCAAAGTTAGCCCACTTTG
TTTATCGCACGGTCGCTATCACGTACACGAAAATGTTGAAGCGTGATGTAGAAATGTAA

Upstream 100 bases:

>100_bases
GGGCTTTTAAATGATAATAACCATGGTGAAGAGGGTAATAGGAGTTTGTTCCTATGCCCTCTTTGCATGATTTTACTGTT
GATAATTTTGGAGGTTTTTT

Downstream 100 bases:

>100_bases
GCTGTTTTGATGAACATTATTTATACGAATGTTCACCCATCCCTCCTTAAAAAATCGCCGTTACAAAATAACGGCGATTT
TTTTTTGTTCGCTACTGCGT

Product: heterodisulfide reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MAQKAFTPDIKFIRELKEAGADTMKKCYQCATCSVVCPLSPNDRPFPRKEMVMAQWGLKDELLKSADIWLCHNCNDCSKH
CPRGARPGDVLAILRKSVIQENAFPGFMGKLVGDPKNIWQALAIPVIFFLIVLAVTGHLNIPEGEVIFRKFFPVHYIDMV
FVPLSTLSMLLFAVSIKRFWGNMVAASGNVKPKQEFMPSLIETLKEIMSHSKFRKCGENPERTGAHSLVFFGFIGLAITT
AWAVFNLYVLQWESPYPVDDPEILALFGGSTVVPWILRIVFKLLANASSLFLLIGGVMIVQARLKERSFETISSSFDWTF
ITMVLLVGASGFLAQLMRVTHFPAVLAYGTYFMHLVFVFYIIIYMPYSKLAHFVYRTVAITYTKMLKRDVEM

Sequences:

>Translated_392_residues
MAQKAFTPDIKFIRELKEAGADTMKKCYQCATCSVVCPLSPNDRPFPRKEMVMAQWGLKDELLKSADIWLCHNCNDCSKH
CPRGARPGDVLAILRKSVIQENAFPGFMGKLVGDPKNIWQALAIPVIFFLIVLAVTGHLNIPEGEVIFRKFFPVHYIDMV
FVPLSTLSMLLFAVSIKRFWGNMVAASGNVKPKQEFMPSLIETLKEIMSHSKFRKCGENPERTGAHSLVFFGFIGLAITT
AWAVFNLYVLQWESPYPVDDPEILALFGGSTVVPWILRIVFKLLANASSLFLLIGGVMIVQARLKERSFETISSSFDWTF
ITMVLLVGASGFLAQLMRVTHFPAVLAYGTYFMHLVFVFYIIIYMPYSKLAHFVYRTVAITYTKMLKRDVEM
>Mature_391_residues
AQKAFTPDIKFIRELKEAGADTMKKCYQCATCSVVCPLSPNDRPFPRKEMVMAQWGLKDELLKSADIWLCHNCNDCSKHC
PRGARPGDVLAILRKSVIQENAFPGFMGKLVGDPKNIWQALAIPVIFFLIVLAVTGHLNIPEGEVIFRKFFPVHYIDMVF
VPLSTLSMLLFAVSIKRFWGNMVAASGNVKPKQEFMPSLIETLKEIMSHSKFRKCGENPERTGAHSLVFFGFIGLAITTA
WAVFNLYVLQWESPYPVDDPEILALFGGSTVVPWILRIVFKLLANASSLFLLIGGVMIVQARLKERSFETISSSFDWTFI
TMVLLVGASGFLAQLMRVTHFPAVLAYGTYFMHLVFVFYIIIYMPYSKLAHFVYRTVAITYTKMLKRDVEM

Specific function: Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). HdrC may carry electrons from hydrogenase to hdrA [H]

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR017680
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: NA

EC number: =1.8.98.1 [H]

Molecular weight: Translated: 44345; Mature: 44214

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: PS00198 4FE4S_FERREDOXIN ; PS01036 HSP70_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQKAFTPDIKFIRELKEAGADTMKKCYQCATCSVVCPLSPNDRPFPRKEMVMAQWGLKD
CCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHCCCHH
ELLKSADIWLCHNCNDCSKHCPRGARPGDVLAILRKSVIQENAFPGFMGKLVGDPKNIWQ
HHHHCCCEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHH
ALAIPVIFFLIVLAVTGHLNIPEGEVIFRKFFPVHYIDMVFVPLSTLSMLLFAVSIKRFW
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GNMVAASGNVKPKQEFMPSLIETLKEIMSHSKFRKCGENPERTGAHSLVFFGFIGLAITT
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
AWAVFNLYVLQWESPYPVDDPEILALFGGSTVVPWILRIVFKLLANASSLFLLIGGVMIV
HHHHHHHHHEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
QARLKERSFETISSSFDWTFITMVLLVGASGFLAQLMRVTHFPAVLAYGTYFMHLVFVFY
HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIIYMPYSKLAHFVYRTVAITYTKMLKRDVEM
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AQKAFTPDIKFIRELKEAGADTMKKCYQCATCSVVCPLSPNDRPFPRKEMVMAQWGLKD
CCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHCCCHH
ELLKSADIWLCHNCNDCSKHCPRGARPGDVLAILRKSVIQENAFPGFMGKLVGDPKNIWQ
HHHHCCCEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHH
ALAIPVIFFLIVLAVTGHLNIPEGEVIFRKFFPVHYIDMVFVPLSTLSMLLFAVSIKRFW
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GNMVAASGNVKPKQEFMPSLIETLKEIMSHSKFRKCGENPERTGAHSLVFFGFIGLAITT
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
AWAVFNLYVLQWESPYPVDDPEILALFGGSTVVPWILRIVFKLLANASSLFLLIGGVMIV
HHHHHHHHHEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
QARLKERSFETISSSFDWTFITMVLLVGASGFLAQLMRVTHFPAVLAYGTYFMHLVFVFY
HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIIYMPYSKLAHFVYRTVAITYTKMLKRDVEM
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]