Definition Chlorobium chlorochromatii CaD3 chromosome, complete genome.
Accession NC_007514
Length 2,572,079

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The map label for this gene is 78189505

Identifier: 78189505

GI number: 78189505

Start: 2025635

End: 2026090

Strand: Reverse

Name: 78189505

Synonym: Cag_1545

Alternate gene names: NA

Gene position: 2026090-2025635 (Counterclockwise)

Preceding gene: 78189510

Following gene: 78189504

Centisome position: 78.77

GC content: 49.12

Gene sequence:

>456_bases
ATGGCATCACGATTCAGGGGGGTATTTAAGCAGTCAGGGGTTATTCCGCTTTTTGATGATAAGGTTGTGCTTATTACTGC
TCGCAAGTCGGATCGTTGGATTATTCCAAAAGGGTACATTGAGTTGGGTATGTCGGCGGCTGATTCTGCGGCTAAAGAGG
CGCTTGAAGAGGCTGGATTGGTGGGTAAGGTAGGTGAGCATCCCATTGGCAAATATCGTTACAATAAATCAGGGCGCCAT
TTTGTGGTGTTGCTCTATCCTTTTTTTGTGGAAACCATGCTTGATGTGTGGGATGAAGTGCATGAGCGTGAGCGTTGTGT
GGTGAGCCCCGATGTGGCGGCTACCATGGTTGCTCATAGCGATGTTGGACGCTTAATTCGGTCGTATTGTGCTTCGTTGG
ATGATGACGAGGCTGTGCTGGTGCCGCCGCATGTTGCCTCAGCAATTACAGGTTAA

Upstream 100 bases:

>100_bases
ACTTTTGGCGCACAATAGCGCATGGCGCAGAAGTTGGGCGAAGCGGGTTAAATTTTTTGTGAATATTTTTTACGGTAATT
AAAAGTAAGGATCTAAAGCA

Downstream 100 bases:

>100_bases
GCTACCATATTAGTAGGCGTTAGCATGGAATTGCTCATTTGTTTGAGTTGGAAATATTTTGAAAAAAATATTTTGTAATC
GTTTTTCGTGTGTTATATTG

Product: NUDIX/MutT family protein

Products: NA

Alternate protein names: Nudix Hydrolase; Nudix Domain Protein; NUDIX/MutT Family Protein; Phosphohistidine Phosphatase SixA; Bis(5-Nucleosidyl)-Tetraphosphatase; NUDIX Family Hydrolase; NTP Pyrophosphohydrolase MutT Family; NUDIX Domain-Containing Protein; Nudix/MutT Family Protein; Hydrolase NUDIX Family; Hydrolase NUDIX Family Protein; Hydroxylase NUDIX Family Protein

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MASRFRGVFKQSGVIPLFDDKVVLITARKSDRWIIPKGYIELGMSAADSAAKEALEEAGLVGKVGEHPIGKYRYNKSGRH
FVVLLYPFFVETMLDVWDEVHERERCVVSPDVAATMVAHSDVGRLIRSYCASLDDDEAVLVPPHVASAITG

Sequences:

>Translated_151_residues
MASRFRGVFKQSGVIPLFDDKVVLITARKSDRWIIPKGYIELGMSAADSAAKEALEEAGLVGKVGEHPIGKYRYNKSGRH
FVVLLYPFFVETMLDVWDEVHERERCVVSPDVAATMVAHSDVGRLIRSYCASLDDDEAVLVPPHVASAITG
>Mature_150_residues
ASRFRGVFKQSGVIPLFDDKVVLITARKSDRWIIPKGYIELGMSAADSAAKEALEEAGLVGKVGEHPIGKYRYNKSGRHF
VVLLYPFFVETMLDVWDEVHERERCVVSPDVAATMVAHSDVGRLIRSYCASLDDDEAVLVPPHVASAITG

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16662; Mature: 16531

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASRFRGVFKQSGVIPLFDDKVVLITARKSDRWIIPKGYIELGMSAADSAAKEALEEAGL
CCCHHHHHHHHCCCCEEECCCEEEEEECCCCCEECCCHHHHHCCCCCHHHHHHHHHHCCC
VGKVGEHPIGKYRYNKSGRHFVVLLYPFFVETMLDVWDEVHERERCVVSPDVAATMVAHS
CCCCCCCCCCCEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHH
DVGRLIRSYCASLDDDEAVLVPPHVASAITG
HHHHHHHHHHCCCCCCCEEEECCHHHHHCCC
>Mature Secondary Structure 
ASRFRGVFKQSGVIPLFDDKVVLITARKSDRWIIPKGYIELGMSAADSAAKEALEEAGL
CCHHHHHHHHCCCCEEECCCEEEEEECCCCCEECCCHHHHHCCCCCHHHHHHHHHHCCC
VGKVGEHPIGKYRYNKSGRHFVVLLYPFFVETMLDVWDEVHERERCVVSPDVAATMVAHS
CCCCCCCCCCCEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHH
DVGRLIRSYCASLDDDEAVLVPPHVASAITG
HHHHHHHHHHCCCCCCCEEEECCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA