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The map label for this gene is pheT

Identifier: 78189504

GI number: 78189504

Start: 2022665

End: 2025076

Strand: Reverse

Name: pheT

Synonym: Cag_1544

Alternate gene names: 78189504

Gene position: 2025076-2022665 (Counterclockwise)

Preceding gene: 78189505

Following gene: 78189503

Centisome position: 78.73

GC content: 48.88

Gene sequence:

>2412_bases
ATGAAAATATCCATTTCTTGGCTTAGGGAGTTTCTTCCCAATTTTTCTTGCGAAACCGTTTCGTTGGTAGAGCGTCTTAC
TTTTCTTGGCTTTGAGGTTGAAGGCGTTGAAGAGTCGGCATCGCTTGACCGGCGTATTGTGGTTGGGCGTGTGCTTGAAA
CCGAGCCGCATCCAAATGCTGAGCGTTTAACACTTTGCTTGGTAGATGTTGGTCGTGAGGAACCGTTGCGCATTGTGTGC
GGTGCGCCCAACGTGCGTGCGGGCATGGTTGTGCCTGTGGCAACCGAAAAAGCTAAGCTGCAATTTCCCGATGGGCAAAC
GCTGACCATTAAGCCCTCAAAAATTCGTGGTGAGCGTTCGCAGGGCATGATTTGCGCTGCCGATGAGCTTGGGTTATCGA
ACGACCATTCGGGCGTTATGGAGCTTGAGAGTAGTTGGGAAATTGGTAAGCCATTTGCCGACTATCTTGAGAGCGATGTT
GTGCTCGATATTGCCGTAACGCCTAATCGTCCCGATGTGCTCTCGCACCTTGGCATTGCCCGTGAGCTTGCCGATGGGGC
ACCTCTTCAGTATCCATCCCAACAATCTCTTACCTACCAACCAGCAGGTGAGCGTATTGCCATTAATGATGCGGTTGCTT
GCCCCTATTATACGGGCGTTATTATTCGCGGCGTTACTATTCGGGAGTCGCCCGAGTGGTTGCGTAAGCGCTTGCAAGCC
ATTGGGCTGAACCCCAAAAACAACATTGTTGATATTACCAACTACATGCTTCATGCGTTGGGGCAGCCTATGCACGCTTT
TGATTGTGCAAAGCTTGCGGGTGAGCGCATTGCGGTGCGTAGCGATTGCCAAGCTGAGGTGGTGGCGCTGAATAATCTTA
CCTACAAGGTTGAAGGTGGAATGCCGGTGATTTGTGATGGCAGTGGTGCTATTGCGGCTATTGCAGGTGTAATGGGTGGA
ATGGCTTCAGCCGTTACAGAGAGCACCACCGATATTTTCTTGGAATCAGCGTTGTTCCATCCTTCGATGGTGCGTCGTAC
TGCCAAAAAGCTTGCACTTGCTTCCGATTCATCGTACCGCTTTGAGCGTGGTGTTGATTCTCGCATGGTGCAACAAGCCT
CTGCTACGGCTGTGGCGCTCATTCTTGAGCTTGCAGGTGGCACGGTTGAGTGTGCTATGGAGCAAGGTTCGGTGGCTGCC
GATTTGCAACTGCTTGCACTTCGTCCCGAGCGCACCAATAAGCTGCTTGGCACTGCCTTGAGTGGTGAGCAAATGGTTGA
ACTGTTGGAGCGCATTGGCTTCCGATGTGTTGAACAAACAACCGAGCAATTGCTTTTTGCCGTGCCATCGTTTCGTGTTG
ATGTAACGGCTGAAATTGATTTGATTGAAGAGGTTGCCCGCTTGTATGGCTACAATGCTATTGAGTCATCGCGCCAAATG
GCAACTATTTACCCTACCAAGCGCCAGCATCCAGCTTATTTCCCCGATTTTCTTCGTGGAGAGCTTATCACCCTTGGGTT
TCGTGAAATTCTTACCAATCCACTGATTAAGCGCAACGATGCCGCTTTAGCATCGGAACAGTTAGTTGATGTGCTCAATC
CCATCAGCGAAGGGTTGGAGGTATTGCGCCCAAGCTTACTGCCCGGACTTCTTAAAGTGATAAGCCACAACATTCGCCAT
GGCAATCGCGACCAAAAGCTTTTTGAAGTAGCGCATGTGTTTGAAGCGAAGCCGCAAGTGCAGCAAACGCAACAGCCGCT
TGAGGGCTATTGCGAACAAGAGCGGTTGGTGATGGCAATAACGGGAAGTCGTTATCTACGCCGTTGGAATCACCCAACCG
ATATGGTTGATTTTTATGATTTGTCGGGTGCAGTTGAGATGCTGCTTGAGCAACTCAATATACTTGATAAATCAGTAGTG
AATATTTATACTCCGTCCGCTTTAAGCATTGATGTGTTTCTTACTGAAAAGGGGAAGCGTACTACTCACAGGCTTGGCAT
TATGCAGCCCGTAAATGCTGCATGGCTTAAGCACTTTGATATTGAGCAAGAAGTTTATTGTGCTGAGCTTGATGTAGCGC
TTTTAGAGCGTTGTTATCAACCAACGAGCGCTTATGAGCCGCCTTCCCGTTTTCCAGTAGTTGAGCGTGATATATCGTTT
ATAATTCCTGAAGGTGTTAGTGCGCAATCGCTTGTAGAGCTGGTACAATCCAGCAATCCACTGATAAAAACGGTAACCGT
GTTTGACCGTTTTGAGCGCAACCATGAAAGTGGTAAAGAGTGCAGTATTGCCCTTTCGCTTACTATTGCCGATGCAAAGG
CAACCTTACAGGATGAAAAAATCAACGATATTCTTGCAACCATTAGCCGCAATGCTGAAAGCAAGCTTGGTGCGGTAATT
CGACAAGTCTGA

Upstream 100 bases:

>100_bases
ATCCCGTTGGGGTCACCACTTTTCTCTCAAATTTTCTTTGGTAAGCTCTGTTGTATGGCAGGGCTTTTTTTGTTTCAAGC
ACCATTTCTTGTATGGTTCT

Downstream 100 bases:

>100_bases
TTTTTGGTTCCATGTTATGCAGGATTCCGACGGGCAGAATATTAGGGTTGAGCTTAGCCTCCTTGAAAAAAATATAGAGC
AGCTCGTTCTTCAATTAACC

Product: phenylalanyl-tRNA synthetase subunit beta

Products: NA

Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS

Number of amino acids: Translated: 803; Mature: 803

Protein sequence:

>803_residues
MKISISWLREFLPNFSCETVSLVERLTFLGFEVEGVEESASLDRRIVVGRVLETEPHPNAERLTLCLVDVGREEPLRIVC
GAPNVRAGMVVPVATEKAKLQFPDGQTLTIKPSKIRGERSQGMICAADELGLSNDHSGVMELESSWEIGKPFADYLESDV
VLDIAVTPNRPDVLSHLGIARELADGAPLQYPSQQSLTYQPAGERIAINDAVACPYYTGVIIRGVTIRESPEWLRKRLQA
IGLNPKNNIVDITNYMLHALGQPMHAFDCAKLAGERIAVRSDCQAEVVALNNLTYKVEGGMPVICDGSGAIAAIAGVMGG
MASAVTESTTDIFLESALFHPSMVRRTAKKLALASDSSYRFERGVDSRMVQQASATAVALILELAGGTVECAMEQGSVAA
DLQLLALRPERTNKLLGTALSGEQMVELLERIGFRCVEQTTEQLLFAVPSFRVDVTAEIDLIEEVARLYGYNAIESSRQM
ATIYPTKRQHPAYFPDFLRGELITLGFREILTNPLIKRNDAALASEQLVDVLNPISEGLEVLRPSLLPGLLKVISHNIRH
GNRDQKLFEVAHVFEAKPQVQQTQQPLEGYCEQERLVMAITGSRYLRRWNHPTDMVDFYDLSGAVEMLLEQLNILDKSVV
NIYTPSALSIDVFLTEKGKRTTHRLGIMQPVNAAWLKHFDIEQEVYCAELDVALLERCYQPTSAYEPPSRFPVVERDISF
IIPEGVSAQSLVELVQSSNPLIKTVTVFDRFERNHESGKECSIALSLTIADAKATLQDEKINDILATISRNAESKLGAVI
RQV

Sequences:

>Translated_803_residues
MKISISWLREFLPNFSCETVSLVERLTFLGFEVEGVEESASLDRRIVVGRVLETEPHPNAERLTLCLVDVGREEPLRIVC
GAPNVRAGMVVPVATEKAKLQFPDGQTLTIKPSKIRGERSQGMICAADELGLSNDHSGVMELESSWEIGKPFADYLESDV
VLDIAVTPNRPDVLSHLGIARELADGAPLQYPSQQSLTYQPAGERIAINDAVACPYYTGVIIRGVTIRESPEWLRKRLQA
IGLNPKNNIVDITNYMLHALGQPMHAFDCAKLAGERIAVRSDCQAEVVALNNLTYKVEGGMPVICDGSGAIAAIAGVMGG
MASAVTESTTDIFLESALFHPSMVRRTAKKLALASDSSYRFERGVDSRMVQQASATAVALILELAGGTVECAMEQGSVAA
DLQLLALRPERTNKLLGTALSGEQMVELLERIGFRCVEQTTEQLLFAVPSFRVDVTAEIDLIEEVARLYGYNAIESSRQM
ATIYPTKRQHPAYFPDFLRGELITLGFREILTNPLIKRNDAALASEQLVDVLNPISEGLEVLRPSLLPGLLKVISHNIRH
GNRDQKLFEVAHVFEAKPQVQQTQQPLEGYCEQERLVMAITGSRYLRRWNHPTDMVDFYDLSGAVEMLLEQLNILDKSVV
NIYTPSALSIDVFLTEKGKRTTHRLGIMQPVNAAWLKHFDIEQEVYCAELDVALLERCYQPTSAYEPPSRFPVVERDISF
IIPEGVSAQSLVELVQSSNPLIKTVTVFDRFERNHESGKECSIALSLTIADAKATLQDEKINDILATISRNAESKLGAVI
RQV
>Mature_803_residues
MKISISWLREFLPNFSCETVSLVERLTFLGFEVEGVEESASLDRRIVVGRVLETEPHPNAERLTLCLVDVGREEPLRIVC
GAPNVRAGMVVPVATEKAKLQFPDGQTLTIKPSKIRGERSQGMICAADELGLSNDHSGVMELESSWEIGKPFADYLESDV
VLDIAVTPNRPDVLSHLGIARELADGAPLQYPSQQSLTYQPAGERIAINDAVACPYYTGVIIRGVTIRESPEWLRKRLQA
IGLNPKNNIVDITNYMLHALGQPMHAFDCAKLAGERIAVRSDCQAEVVALNNLTYKVEGGMPVICDGSGAIAAIAGVMGG
MASAVTESTTDIFLESALFHPSMVRRTAKKLALASDSSYRFERGVDSRMVQQASATAVALILELAGGTVECAMEQGSVAA
DLQLLALRPERTNKLLGTALSGEQMVELLERIGFRCVEQTTEQLLFAVPSFRVDVTAEIDLIEEVARLYGYNAIESSRQM
ATIYPTKRQHPAYFPDFLRGELITLGFREILTNPLIKRNDAALASEQLVDVLNPISEGLEVLRPSLLPGLLKVISHNIRH
GNRDQKLFEVAHVFEAKPQVQQTQQPLEGYCEQERLVMAITGSRYLRRWNHPTDMVDFYDLSGAVEMLLEQLNILDKSVV
NIYTPSALSIDVFLTEKGKRTTHRLGIMQPVNAAWLKHFDIEQEVYCAELDVALLERCYQPTSAYEPPSRFPVVERDISF
IIPEGVSAQSLVELVQSSNPLIKTVTVFDRFERNHESGKECSIALSLTIADAKATLQDEKINDILATISRNAESKLGAVI
RQV

Specific function: Unknown

COG id: COG0072

COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 tRNA-binding domain

Homologues:

Organism=Homo sapiens, GI124028525, Length=280, Percent_Identity=27.5, Blast_Score=77, Evalue=6e-14,
Organism=Escherichia coli, GI1788006, Length=822, Percent_Identity=32.7250608272506, Blast_Score=350, Evalue=2e-97,
Organism=Caenorhabditis elegans, GI17533403, Length=292, Percent_Identity=28.0821917808219, Blast_Score=80, Evalue=6e-15,
Organism=Drosophila melanogaster, GI21355211, Length=295, Percent_Identity=28.4745762711864, Blast_Score=74, Evalue=4e-13,

Paralogues:

None

Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): SYFB_CHLCH (Q3AQC6)

Other databases:

- EMBL:   CP000108
- RefSeq:   YP_379842.1
- ProteinModelPortal:   Q3AQC6
- SMR:   Q3AQC6
- STRING:   Q3AQC6
- GeneID:   3746544
- GenomeReviews:   CP000108_GR
- KEGG:   cch:Cag_1544
- eggNOG:   COG0072
- HOGENOM:   HBG399638
- OMA:   ADKLRVC
- ProtClustDB:   PRK00629
- BioCyc:   CCHL340177:CAG_1544-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00283
- InterPro:   IPR005146
- InterPro:   IPR005147
- InterPro:   IPR009061
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004532
- InterPro:   IPR020825
- InterPro:   IPR005121
- InterPro:   IPR002547
- Gene3D:   G3DSA:3.50.40.10
- Gene3D:   G3DSA:3.30.56.20
- Gene3D:   G3DSA:3.30.70.380
- Gene3D:   G3DSA:2.40.50.140
- SMART:   SM00873
- SMART:   SM00874
- SMART:   SM00896
- TIGRFAMs:   TIGR00472

Pfam domain/function: PF03483 B3_4; PF03484 B5; PF03147 FDX-ACB; PF01588 tRNA_bind; SSF56037 B3_4; SSF54991 Fdx_AntiC_bd; SSF50249 Nucleic_acid_OB; SSF46955 Putativ_DNA_bind

EC number: =6.1.1.20

Molecular weight: Translated: 88714; Mature: 88714

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS51483 B5; PS51447 FDX_ACB; PS50886 TRBD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISISWLREFLPNFSCETVSLVERLTFLGFEVEGVEESASLDRRIVVGRVLETEPHPNA
CEEEHHHHHHHCCCCCCHHHHHHHHHHHHCCEEECCCHHHCCCHHEEEEHHCCCCCCCCH
ERLTLCLVDVGREEPLRIVCGAPNVRAGMVVPVATEKAKLQFPDGQTLTIKPSKIRGERS
HHEEEEEEECCCCCCEEEEECCCCCCCCEEEEEECCCCEEECCCCCEEEEECHHHCCCCC
QGMICAADELGLSNDHSGVMELESSWEIGKPFADYLESDVVLDIAVTPNRPDVLSHLGIA
CCEEEEHHHCCCCCCCCCCEEECCCCCCCCHHHHHCCCCEEEEEEECCCCCHHHHHHHHH
RELADGAPLQYPSQQSLTYQPAGERIAINDAVACPYYTGVIIRGVTIRESPEWLRKRLQA
HHHCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCHHHCEEEEEEEECCCHHHHHHHHHH
IGLNPKNNIVDITNYMLHALGQPMHAFDCAKLAGERIAVRSDCQAEVVALNNLTYKVEGG
HCCCCCCCEEHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCEEEEEEECEEEEECCC
MPVICDGSGAIAAIAGVMGGMASAVTESTTDIFLESALFHPSMVRRTAKKLALASDSSYR
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCH
FERGVDSRMVQQASATAVALILELAGGTVECAMEQGSVAADLQLLALRPERTNKLLGTAL
HHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEECEEEEEECCCHHHHHHHCCC
SGEQMVELLERIGFRCVEQTTEQLLFAVPSFRVDVTAEIDLIEEVARLYGYNAIESSRQM
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCCHHHCCCCE
ATIYPTKRQHPAYFPDFLRGELITLGFREILTNPLIKRNDAALASEQLVDVLNPISEGLE
EEECCCCCCCCCCCCHHHCCHHHEEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VLRPSLLPGLLKVISHNIRHGNRDQKLFEVAHVFEAKPQVQQTQQPLEGYCEQERLVMAI
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEE
TGSRYLRRWNHPTDMVDFYDLSGAVEMLLEQLNILDKSVVNIYTPSALSIDVFLTEKGKR
ECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEEECCCCC
TTHRLGIMQPVNAAWLKHFDIEQEVYCAELDVALLERCYQPTSAYEPPSRFPVVERDISF
HHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCE
IIPEGVSAQSLVELVQSSNPLIKTVTVFDRFERNHESGKECSIALSLTIADAKATLQDEK
EECCCCCHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCEEEEEEEEEECCHHHHHHHH
INDILATISRNAESKLGAVIRQV
HHHHHHHHHCCHHHHHHHHHHCC
>Mature Secondary Structure
MKISISWLREFLPNFSCETVSLVERLTFLGFEVEGVEESASLDRRIVVGRVLETEPHPNA
CEEEHHHHHHHCCCCCCHHHHHHHHHHHHCCEEECCCHHHCCCHHEEEEHHCCCCCCCCH
ERLTLCLVDVGREEPLRIVCGAPNVRAGMVVPVATEKAKLQFPDGQTLTIKPSKIRGERS
HHEEEEEEECCCCCCEEEEECCCCCCCCEEEEEECCCCEEECCCCCEEEEECHHHCCCCC
QGMICAADELGLSNDHSGVMELESSWEIGKPFADYLESDVVLDIAVTPNRPDVLSHLGIA
CCEEEEHHHCCCCCCCCCCEEECCCCCCCCHHHHHCCCCEEEEEEECCCCCHHHHHHHHH
RELADGAPLQYPSQQSLTYQPAGERIAINDAVACPYYTGVIIRGVTIRESPEWLRKRLQA
HHHCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCHHHCEEEEEEEECCCHHHHHHHHHH
IGLNPKNNIVDITNYMLHALGQPMHAFDCAKLAGERIAVRSDCQAEVVALNNLTYKVEGG
HCCCCCCCEEHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCEEEEEEECEEEEECCC
MPVICDGSGAIAAIAGVMGGMASAVTESTTDIFLESALFHPSMVRRTAKKLALASDSSYR
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCH
FERGVDSRMVQQASATAVALILELAGGTVECAMEQGSVAADLQLLALRPERTNKLLGTAL
HHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEECEEEEEECCCHHHHHHHCCC
SGEQMVELLERIGFRCVEQTTEQLLFAVPSFRVDVTAEIDLIEEVARLYGYNAIESSRQM
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCCHHHCCCCE
ATIYPTKRQHPAYFPDFLRGELITLGFREILTNPLIKRNDAALASEQLVDVLNPISEGLE
EEECCCCCCCCCCCCHHHCCHHHEEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VLRPSLLPGLLKVISHNIRHGNRDQKLFEVAHVFEAKPQVQQTQQPLEGYCEQERLVMAI
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEE
TGSRYLRRWNHPTDMVDFYDLSGAVEMLLEQLNILDKSVVNIYTPSALSIDVFLTEKGKR
ECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEEEECCCCC
TTHRLGIMQPVNAAWLKHFDIEQEVYCAELDVALLERCYQPTSAYEPPSRFPVVERDISF
HHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCE
IIPEGVSAQSLVELVQSSNPLIKTVTVFDRFERNHESGKECSIALSLTIADAKATLQDEK
EECCCCCHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCEEEEEEEEEECCHHHHHHHH
INDILATISRNAESKLGAVIRQV
HHHHHHHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA