Click here to switch to the map view.

The map label for this gene is 78189503

Identifier: 78189503

GI number: 78189503

Start: 2022343

End: 2022648

Strand: Reverse

Name: 78189503

Synonym: Cag_1543

Alternate gene names: NA

Gene position: 2022648-2022343 (Counterclockwise)

Preceding gene: 78189504

Following gene: 78189502

Centisome position: 78.64

GC content: 47.39

Gene sequence:

>306_bases
ATGCAGGATTCCGACGGGCAGAATATTAGGGTTGAGCTTAGCCTCCTTGAAAAAAATATAGAGCAGCTCGTTCTTCAATT
AACCGATTGTCGGAAAGAAAATGAGGCGCTTCGTTCAGAGCTTGCAAGTCTGCAAAATATTTTACGATCGTGCAAATTGC
CGGGGAGCGGTTCAGCGCAGTCGCCCACTGATGGGAGTATGAGCGAGGGAGCCCTAAGCGGTAGCGAAAAAATGCAATTC
AAGCAGCGCTTAGTGTTGCTCTTGCAAAAAATAGAGATGGAGTTGCGTAACAGCCAACCGCTGTAA

Upstream 100 bases:

>100_bases
CAGGATGAAAAAATCAACGATATTCTTGCAACCATTAGCCGCAATGCTGAAAGCAAGCTTGGTGCGGTAATTCGACAAGT
CTGATTTTTGGTTCCATGTT

Downstream 100 bases:

>100_bases
GAAGACCCTACCTGCACATGGAAAAAATTGATGTAAATGTTTATGGCAATAGCTTTCCGTTGCGTTCGGCGCGACGAGAG
CTTACCGAAAAGGCTGCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MQDSDGQNIRVELSLLEKNIEQLVLQLTDCRKENEALRSELASLQNILRSCKLPGSGSAQSPTDGSMSEGALSGSEKMQF
KQRLVLLLQKIEMELRNSQPL

Sequences:

>Translated_101_residues
MQDSDGQNIRVELSLLEKNIEQLVLQLTDCRKENEALRSELASLQNILRSCKLPGSGSAQSPTDGSMSEGALSGSEKMQF
KQRLVLLLQKIEMELRNSQPL
>Mature_101_residues
MQDSDGQNIRVELSLLEKNIEQLVLQLTDCRKENEALRSELASLQNILRSCKLPGSGSAQSPTDGSMSEGALSGSEKMQF
KQRLVLLLQKIEMELRNSQPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11245; Mature: 11245

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDSDGQNIRVELSLLEKNIEQLVLQLTDCRKENEALRSELASLQNILRSCKLPGSGSAQ
CCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
SPTDGSMSEGALSGSEKMQFKQRLVLLLQKIEMELRNSQPL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQDSDGQNIRVELSLLEKNIEQLVLQLTDCRKENEALRSELASLQNILRSCKLPGSGSAQ
CCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
SPTDGSMSEGALSGSEKMQFKQRLVLLLQKIEMELRNSQPL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA