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The map label for this gene is ribF [H]

Identifier: 78189420

GI number: 78189420

Start: 1924431

End: 1925393

Strand: Reverse

Name: ribF [H]

Synonym: Cag_1459

Alternate gene names: 78189420

Gene position: 1925393-1924431 (Counterclockwise)

Preceding gene: 78189421

Following gene: 162319772

Centisome position: 74.86

GC content: 48.18

Gene sequence:

>963_bases
ATGCGTTTAATCACCTACGATAATCACCACGTTTATGCTTATGGTAGCAGTGAGCCACTCACTTTTTTGCCACAGCCGTC
GGTGGTAACGGTAGGCTCATATGATGGCGTTCATTGTGGGCATCGGGTGATTCTTTCTCGTTTGGTAGAGGTGGCGCATC
ACAACAACTTACGCAGTGTGGTGGTAACCTTTGAGCCACATCCACGCACGGTGCTAAAAGGGGCACTAACGGGACCACTT
GGATTGCTTACAACGCTTGAAGAAAAAAGTGATCTGCTTGCGGCTGCTGCCGTTGATCTGCTTTTTGTGGTACGCTTTAC
GCACGATTTTGCAGCACGCACTTCCGATGATTTTATTCGCAATGTGTTGGTGGGCTTACTTGGTGCCGAGCGCATTATTG
TTGGCTACGACCACGCTTTTGGGCGCGACCGCAGCGGCAGCCACAACACCTTAGAGCGGCTTGGGAATGAATTGCATTTT
GGGGTGGAAGTGATTGATGAAGTGCTGATTGGCAACGAGCATTTGTCGAGTACGCGCATTCGCAAGCTGTTGCAAGATGG
GCGCATTGAAGAGGTTAATGAATTTCTTGGTTCTCCTTATCTTATTACGGGATGGGTTGTACAAGGCGCGCAACTTGGGC
GCACCATTGGTTTTCCAACCGTTAATCTCCAATTCCATCCCGCAAAACTTCTACCACGCTATGGTGTTTATTTTGCCCGA
ACGATGGTGCAAGGTGTGCCCTACATGGCGCTGATGAACATTGGTAAACGTCCTACCGTTTCAAGCAATGGAGAAGCCAC
TATTGAAGCGCATTTACTTGGCTTTGAGGGTTCACTCTATGGCGAAGAATTACGTTTTAGCATCCTCCGTTTTATTCGCG
ACGAAAAGCGCTTTGCTTCACTTGAGGCGCTGCAAGAGCAGCTTGAAAAAGATAAAAAAGCGGTAGAGATGTATCTTGAA
TAA

Upstream 100 bases:

>100_bases
GTGGCACTGCCTCCACTATACATCCTGCAACATAAAGAGCGCTCCCTATCATTCTTGAAAATATACGGGCGGCTCTCTTT
TCTAAGTATAAATCTCATTC

Downstream 100 bases:

>100_bases
TGTTATATTGCCCACTATTTCTTTTCCCTTATAATTCCAATCATGTAGCTATGAGCCTGACACAAGATCAGAAAGTCGAG
ATTATTAAACAGTTTGGCAC

Product: riboflavin kinase / FAD synthetase

Products: NA

Alternate protein names: Riboflavin kinase; Flavokinase; FMN adenylyltransferase; FAD pyrophosphorylase; FAD synthase [H]

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MRLITYDNHHVYAYGSSEPLTFLPQPSVVTVGSYDGVHCGHRVILSRLVEVAHHNNLRSVVVTFEPHPRTVLKGALTGPL
GLLTTLEEKSDLLAAAAVDLLFVVRFTHDFAARTSDDFIRNVLVGLLGAERIIVGYDHAFGRDRSGSHNTLERLGNELHF
GVEVIDEVLIGNEHLSSTRIRKLLQDGRIEEVNEFLGSPYLITGWVVQGAQLGRTIGFPTVNLQFHPAKLLPRYGVYFAR
TMVQGVPYMALMNIGKRPTVSSNGEATIEAHLLGFEGSLYGEELRFSILRFIRDEKRFASLEALQEQLEKDKKAVEMYLE

Sequences:

>Translated_320_residues
MRLITYDNHHVYAYGSSEPLTFLPQPSVVTVGSYDGVHCGHRVILSRLVEVAHHNNLRSVVVTFEPHPRTVLKGALTGPL
GLLTTLEEKSDLLAAAAVDLLFVVRFTHDFAARTSDDFIRNVLVGLLGAERIIVGYDHAFGRDRSGSHNTLERLGNELHF
GVEVIDEVLIGNEHLSSTRIRKLLQDGRIEEVNEFLGSPYLITGWVVQGAQLGRTIGFPTVNLQFHPAKLLPRYGVYFAR
TMVQGVPYMALMNIGKRPTVSSNGEATIEAHLLGFEGSLYGEELRFSILRFIRDEKRFASLEALQEQLEKDKKAVEMYLE
>Mature_320_residues
MRLITYDNHHVYAYGSSEPLTFLPQPSVVTVGSYDGVHCGHRVILSRLVEVAHHNNLRSVVVTFEPHPRTVLKGALTGPL
GLLTTLEEKSDLLAAAAVDLLFVVRFTHDFAARTSDDFIRNVLVGLLGAERIIVGYDHAFGRDRSGSHNTLERLGNELHF
GVEVIDEVLIGNEHLSSTRIRKLLQDGRIEEVNEFLGSPYLITGWVVQGAQLGRTIGFPTVNLQFHPAKLLPRYGVYFAR
TMVQGVPYMALMNIGKRPTVSSNGEATIEAHLLGFEGSLYGEELRFSILRFIRDEKRFASLEALQEQLEKDKKAVEMYLE

Specific function: Unknown

COG id: COG0196

COG function: function code H; FAD synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribF family [H]

Homologues:

Organism=Escherichia coli, GI1786208, Length=295, Percent_Identity=37.9661016949153, Blast_Score=172, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI17541882, Length=120, Percent_Identity=36.6666666666667, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015864
- InterPro:   IPR015865
- InterPro:   IPR002606
- InterPro:   IPR014729 [H]

Pfam domain/function: PF06574 FAD_syn; PF01687 Flavokinase [H]

EC number: =2.7.1.26; =2.7.7.2 [H]

Molecular weight: Translated: 35780; Mature: 35780

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLITYDNHHVYAYGSSEPLTFLPQPSVVTVGSYDGVHCGHRVILSRLVEVAHHNNLRSV
CEEEEECCCEEEEECCCCCEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEE
VVTFEPHPRTVLKGALTGPLGLLTTLEEKSDLLAAAAVDLLFVVRFTHDFAARTSDDFIR
EEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
NVLVGLLGAERIIVGYDHAFGRDRSGSHNTLERLGNELHFGVEVIDEVLIGNEHLSSTRI
HHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHH
RKLLQDGRIEEVNEFLGSPYLITGWVVQGAQLGRTIGFPTVNLQFHPAKLLPRYGVYFAR
HHHHHCCCHHHHHHHHCCCEEEEHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHH
TMVQGVPYMALMNIGKRPTVSSNGEATIEAHLLGFEGSLYGEELRFSILRFIRDEKRFAS
HHHHCCCHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
LEALQEQLEKDKKAVEMYLE
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRLITYDNHHVYAYGSSEPLTFLPQPSVVTVGSYDGVHCGHRVILSRLVEVAHHNNLRSV
CEEEEECCCEEEEECCCCCEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEE
VVTFEPHPRTVLKGALTGPLGLLTTLEEKSDLLAAAAVDLLFVVRFTHDFAARTSDDFIR
EEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
NVLVGLLGAERIIVGYDHAFGRDRSGSHNTLERLGNELHFGVEVIDEVLIGNEHLSSTRI
HHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHH
RKLLQDGRIEEVNEFLGSPYLITGWVVQGAQLGRTIGFPTVNLQFHPAKLLPRYGVYFAR
HHHHHCCCHHHHHHHHCCCEEEEHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHH
TMVQGVPYMALMNIGKRPTVSSNGEATIEAHLLGFEGSLYGEELRFSILRFIRDEKRFAS
HHHHCCCHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
LEALQEQLEKDKKAVEMYLE
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]