| Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
|---|---|
| Accession | NC_007514 |
| Length | 2,572,079 |
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The map label for this gene is 78189393
Identifier: 78189393
GI number: 78189393
Start: 1900634
End: 1901629
Strand: Reverse
Name: 78189393
Synonym: Cag_1431
Alternate gene names: NA
Gene position: 1901629-1900634 (Counterclockwise)
Preceding gene: 78189403
Following gene: 78189388
Centisome position: 73.93
GC content: 46.39
Gene sequence:
>996_bases ATGGGATGTATAACGGCACTAACCCTTTCCAGCGCACTACATGCTGCGTCCTCCTCACCCCAAAAAATTGGAATCCTCTG GTGGAATGTTGAAAATTTATTTGATACACAAGATGATCCTGCAAAGCGCGATGAAGACTTTACCCCTAACGGTAAGCTGC AATGGAGTGAAAAAAAGCTCTATTTGAAGCAAATGCGCATTCGCGACTTGCTCGGCGCACTTGCGGCTGATAAGCAAATG GGGAGTTTGCCTGATATTATAGGATTTGCTGAAGTTGAAAATAAAACGGTGTTTGAACAAACGTTACAAGGCGTTAAAAC GGGAAGCTACAAAAGCGTTTACTACAACTCACGCGATCCTCGTGGCATTGATGTGGCATTAGCGTACAATTCTGCTACAC TCAAGCTTCAACACTCCAAAGCATACTCGGTGCCACTTAAGCACCCAACACGCCCAGTGGTAGTTGCAAGCTTTATGGTA GGGCGCCATCCTCTGCATTTGCTGCTTAACCATTGGCCTTCGCGTGCGTTTGATGCCGAGTTAAGCGAACCCAACCGCAT TGCAGCCGCTACGATAGCTCGCCATATTGTGGATAGTTTGCTAACCGCAAATCCTAAAGCTGACGTGGTGGTAATGGGCG ACATGAATGACGAAGCCACAAACCGCTCATTAGCAAACACTCTTGGCTCCTCAATGGATGGGGTGCAAGTAAAGGCGGCT AAAGGGAAGCTGCTCTACAACTGTTGGAGTGGCTACAATGGTATTGGCAGTTACTACTACCGCAGCAAATGGCAGAAAAT TGACCACATGTTGCTAACGCACGGTATGCTTGATCGCACCGGCTTTTACGTTACAAAAGAGGCATTCCGCTGTATTGATT ATCCCGCACTGTTAAAAAGCAGCGGTAAAGGCACATGGTCAACATATGAAAAACGGGTCTATAAAGGTGGTTACGCTGAT CATTTGCCACTGTATTTAAAAGTAAGCGTGGAATAA
Upstream 100 bases:
>100_bases CTATGAGGTGTGATGTAATTTTATTATTTTTATATAATAAAATATCGTCATTATGGTAAAGAAAAAAAATAGATGGTGGC GCTTTGGGTTCCCATTTTTT
Downstream 100 bases:
>100_bases TTTTGTGCTATTGTATGAGATGCAAAATTTTGCGTCTCTACGTTCAAAAACAATAAATCCTGCCAATCCGTCTTAGGGGC TATCATACATTCGGGGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family Protein; Endonuclease/Exonuclease/Phosphatase Family; Endonuclease
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MGCITALTLSSALHAASSSPQKIGILWWNVENLFDTQDDPAKRDEDFTPNGKLQWSEKKLYLKQMRIRDLLGALAADKQM GSLPDIIGFAEVENKTVFEQTLQGVKTGSYKSVYYNSRDPRGIDVALAYNSATLKLQHSKAYSVPLKHPTRPVVVASFMV GRHPLHLLLNHWPSRAFDAELSEPNRIAAATIARHIVDSLLTANPKADVVVMGDMNDEATNRSLANTLGSSMDGVQVKAA KGKLLYNCWSGYNGIGSYYYRSKWQKIDHMLLTHGMLDRTGFYVTKEAFRCIDYPALLKSSGKGTWSTYEKRVYKGGYAD HLPLYLKVSVE
Sequences:
>Translated_331_residues MGCITALTLSSALHAASSSPQKIGILWWNVENLFDTQDDPAKRDEDFTPNGKLQWSEKKLYLKQMRIRDLLGALAADKQM GSLPDIIGFAEVENKTVFEQTLQGVKTGSYKSVYYNSRDPRGIDVALAYNSATLKLQHSKAYSVPLKHPTRPVVVASFMV GRHPLHLLLNHWPSRAFDAELSEPNRIAAATIARHIVDSLLTANPKADVVVMGDMNDEATNRSLANTLGSSMDGVQVKAA KGKLLYNCWSGYNGIGSYYYRSKWQKIDHMLLTHGMLDRTGFYVTKEAFRCIDYPALLKSSGKGTWSTYEKRVYKGGYAD HLPLYLKVSVE >Mature_330_residues GCITALTLSSALHAASSSPQKIGILWWNVENLFDTQDDPAKRDEDFTPNGKLQWSEKKLYLKQMRIRDLLGALAADKQMG SLPDIIGFAEVENKTVFEQTLQGVKTGSYKSVYYNSRDPRGIDVALAYNSATLKLQHSKAYSVPLKHPTRPVVVASFMVG RHPLHLLLNHWPSRAFDAELSEPNRIAAATIARHIVDSLLTANPKADVVVMGDMNDEATNRSLANTLGSSMDGVQVKAAK GKLLYNCWSGYNGIGSYYYRSKWQKIDHMLLTHGMLDRTGFYVTKEAFRCIDYPALLKSSGKGTWSTYEKRVYKGGYADH LPLYLKVSVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36943; Mature: 36811
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGCITALTLSSALHAASSSPQKIGILWWNVENLFDTQDDPAKRDEDFTPNGKLQWSEKKL CCCHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHCCCCCCCCCCCCCCCCCCCEEEHHHHH YLKQMRIRDLLGALAADKQMGSLPDIIGFAEVENKTVFEQTLQGVKTGSYKSVYYNSRDP HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCEEEEEECCCCC RGIDVALAYNSATLKLQHSKAYSVPLKHPTRPVVVASFMVGRHPLHLLLNHWPSRAFDAE CCEEEEEEECCEEEEEECCCEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCC LSEPNRIAAATIARHIVDSLLTANPKADVVVMGDMNDEATNRSLANTLGSSMDGVQVKAA CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEC KGKLLYNCWSGYNGIGSYYYRSKWQKIDHMLLTHGMLDRTGFYVTKEAFRCIDYPALLKS CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCEEEHHHHHHCCCHHHHHC SGKGTWSTYEKRVYKGGYADHLPLYLKVSVE CCCCCHHHHHHHHHCCCCCCCCCEEEEEEEC >Mature Secondary Structure GCITALTLSSALHAASSSPQKIGILWWNVENLFDTQDDPAKRDEDFTPNGKLQWSEKKL CCHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHCCCCCCCCCCCCCCCCCCCEEEHHHHH YLKQMRIRDLLGALAADKQMGSLPDIIGFAEVENKTVFEQTLQGVKTGSYKSVYYNSRDP HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCEEEEEECCCCC RGIDVALAYNSATLKLQHSKAYSVPLKHPTRPVVVASFMVGRHPLHLLLNHWPSRAFDAE CCEEEEEEECCEEEEEECCCEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCC LSEPNRIAAATIARHIVDSLLTANPKADVVVMGDMNDEATNRSLANTLGSSMDGVQVKAA CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEC KGKLLYNCWSGYNGIGSYYYRSKWQKIDHMLLTHGMLDRTGFYVTKEAFRCIDYPALLKS CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCEEEHHHHHHCCCHHHHHC SGKGTWSTYEKRVYKGGYADHLPLYLKVSVE CCCCCHHHHHHHHHCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA