| Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
|---|---|
| Accession | NC_007514 |
| Length | 2,572,079 |
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The map label for this gene is 78189269
Identifier: 78189269
GI number: 78189269
Start: 1771601
End: 1771909
Strand: Reverse
Name: 78189269
Synonym: Cag_1304
Alternate gene names: NA
Gene position: 1771909-1771601 (Counterclockwise)
Preceding gene: 78189286
Following gene: 78189264
Centisome position: 68.89
GC content: 49.84
Gene sequence:
>309_bases GTGGCTTTTATTAAACAAATAAGTAACGCTATGGATGCTCAATTATTACAAATAACCGCTCAGGTACTGTTTGAAAAGCT GCAAAGCTTACGCTCAAAAATGCAGGATGATGTTGCTACGCCCGATGACCGTGTGGCGGCGGCAATGCTTGAGGAGGTTG TTGCCCTTGCACGGAATCGCTACTGTGTGGCTGGCAATGAGGCTGAGTTTCAGCAAGGTAAGAGCGTATGGGTAGAGCGC ACGGCGGCTACACATTTTCCGCACATTCGCTTGCATGGTGGGGCACTTGAGGACGATCCGATTGCGTGA
Upstream 100 bases:
>100_bases TGTGATGGCTCAATAATAAAAAAAATCTTCTATCCCCCAAACTTTTTTTCTGCCACACCTCTTTTTTTTAAAGTTCTAAG GGAAGTGCAAGAGGGGGAGT
Downstream 100 bases:
>100_bases GTTTGCGTGGCGGAGAGTGGGGATGATGGCTATCTTCGTCTTGGTTTTTCAATTGGAACAATTGGTTCGTAAGCTTTTAA GCCGTTATCGCCTGTAAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MAFIKQISNAMDAQLLQITAQVLFEKLQSLRSKMQDDVATPDDRVAAAMLEEVVALARNRYCVAGNEAEFQQGKSVWVER TAATHFPHIRLHGGALEDDPIA
Sequences:
>Translated_102_residues MAFIKQISNAMDAQLLQITAQVLFEKLQSLRSKMQDDVATPDDRVAAAMLEEVVALARNRYCVAGNEAEFQQGKSVWVER TAATHFPHIRLHGGALEDDPIA >Mature_101_residues AFIKQISNAMDAQLLQITAQVLFEKLQSLRSKMQDDVATPDDRVAAAMLEEVVALARNRYCVAGNEAEFQQGKSVWVERT AATHFPHIRLHGGALEDDPIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11309; Mature: 11178
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFIKQISNAMDAQLLQITAQVLFEKLQSLRSKMQDDVATPDDRVAAAMLEEVVALARNR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC YCVAGNEAEFQQGKSVWVERTAATHFPHIRLHGGALEDDPIA EEECCCHHHHHCCHHHHHHHHHHHCCCEEEEECCCCCCCCCC >Mature Secondary Structure AFIKQISNAMDAQLLQITAQVLFEKLQSLRSKMQDDVATPDDRVAAAMLEEVVALARNR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC YCVAGNEAEFQQGKSVWVERTAATHFPHIRLHGGALEDDPIA EEECCCHHHHHCCHHHHHHHHHHHCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA