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The map label for this gene is yhaO [H]

Identifier: 78189060

GI number: 78189060

Start: 1478952

End: 1480256

Strand: Reverse

Name: yhaO [H]

Synonym: Cag_1093

Alternate gene names: 78189060

Gene position: 1480256-1478952 (Counterclockwise)

Preceding gene: 78189074

Following gene: 78189059

Centisome position: 57.55

GC content: 52.18

Gene sequence:

>1305_bases
ATGTTTACTTTTCTCCACGTTGCTGATCTCCACCTTGATAGTCCGTTGAAGGGGTTGGAAGAGTACCCCGATGCGCCGCT
TAAACAATTGCGCCATGCAACGCGCCGTGCCTTTGATAATGTGGTGCAAATGGCGCTTGATGAGCGAGTGGCTTTTGTGG
TTGTTGCGGGCGATTTGTACGATACCGATTGGCGCGATTACAACACGGGGCTTTTTTTTGTAAGCCGTATGGCAAAGTTG
CGCGAAGCGGGTATTCCTGTGATTATTGTGTCGGGCAACCACGATGCAGCCAGCCAAATTACCCGTTCGCTACGCCTGCC
CGATAACGTAAAAATTCTCTCCCATACCCATCCCGAATCGTATCTGCTTGAACCATACAATGTGGCTATTCATGGGCAGA
GCTTTGCCACGCGCTTTGTGCGCGACGATCTTGCGCGTAACTATCCGCAAGCTGATCCGTCACTTTTTACCATTGGCTTG
TTGCACACGTCGCTTGAAACAAGCGGCGATGTGTATGCGCCGACAACGCTTGATTTGCTGCGTTCAAAGGGGTATAACTA
CTGGGCGCTTGGGCATATGCACCGCCACGAAGTGGTGCATCGCAATCCGTGGGTGGTTTACACGGGCAATATTCAAGGGC
GACATATTCGTGAGGGAGGAGCTAAGGGATGTATGTTGGTAACGGTGGAAAATGATGCGGTGGTACAAACCGAGTGGCGT
GCGGTAGATGTGTTGCGTTGGGCACGCTGTGCGGTGTTGCTTGAGGGATGCGACTCTATGGAGCAAGTCTATCATCTTGT
GCGAGAGCGCATGGAGGAGCTTCGCCAGCAAGCTGAAGGGCGTCCGCTTGCGCTTCGGGTGCAACTACGCGGAGCCACGC
CGCTGCACCACACGTTGCATACTAAAATTGGGCATGTTATGGAGGAGATTCGGGCAATTGCGGTTAGCTTTGGTGATTGT
TGGCTTGAAAAGGTGGAGTTAGAGTTGAGCGCTCCCCACGCCAAAAGCGATCTTCTTGGCGCAGCCTCTCCTCTTGCCTC
CCTGCTTGAAGCCGTTGATGCGCTGGAGCTGCCCGATGGTAGCTTAACATCACTTCTGCCTGACTTTGAAAAGCTCCGCC
ACAAACTTCCCCATGAATTAATCAGCGATGGCGATCCTTTTGCGCCGCCAGCCGATGAATTAGAAATATTGCGTGATGAG
GTGAAGCAACTCCTAAGCGCCACTATTGAAGAAACTATTGGGGGAACTACTGAAAGAGCTATAAGAGGAAGTATGGGGGG
AACTATTGGAGGGAGGAACGCATGA

Upstream 100 bases:

>100_bases
GTGTCAAGCTTACAATGACCGAATGTGCCATGCTCTGTTTACTTCCCCACAAACCACTATATTCCCCCCATTCTTAAAAT
CCCTTGGCTCTTAATTCCCC

Downstream 100 bases:

>100_bases
AAATTCGTCGTTTTGAATTGAACGCTTTCGGACCTTTTAGCGGCAATGTGCTCGATTTTAACTCACCAACCCCCGGCTTG
CACATTGTGTATGGAGCCAA

Product: putative exonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MFTFLHVADLHLDSPLKGLEEYPDAPLKQLRHATRRAFDNVVQMALDERVAFVVVAGDLYDTDWRDYNTGLFFVSRMAKL
REAGIPVIIVSGNHDAASQITRSLRLPDNVKILSHTHPESYLLEPYNVAIHGQSFATRFVRDDLARNYPQADPSLFTIGL
LHTSLETSGDVYAPTTLDLLRSKGYNYWALGHMHRHEVVHRNPWVVYTGNIQGRHIREGGAKGCMLVTVENDAVVQTEWR
AVDVLRWARCAVLLEGCDSMEQVYHLVRERMEELRQQAEGRPLALRVQLRGATPLHHTLHTKIGHVMEEIRAIAVSFGDC
WLEKVELELSAPHAKSDLLGAASPLASLLEAVDALELPDGSLTSLLPDFEKLRHKLPHELISDGDPFAPPADELEILRDE
VKQLLSATIEETIGGTTERAIRGSMGGTIGGRNA

Sequences:

>Translated_434_residues
MFTFLHVADLHLDSPLKGLEEYPDAPLKQLRHATRRAFDNVVQMALDERVAFVVVAGDLYDTDWRDYNTGLFFVSRMAKL
REAGIPVIIVSGNHDAASQITRSLRLPDNVKILSHTHPESYLLEPYNVAIHGQSFATRFVRDDLARNYPQADPSLFTIGL
LHTSLETSGDVYAPTTLDLLRSKGYNYWALGHMHRHEVVHRNPWVVYTGNIQGRHIREGGAKGCMLVTVENDAVVQTEWR
AVDVLRWARCAVLLEGCDSMEQVYHLVRERMEELRQQAEGRPLALRVQLRGATPLHHTLHTKIGHVMEEIRAIAVSFGDC
WLEKVELELSAPHAKSDLLGAASPLASLLEAVDALELPDGSLTSLLPDFEKLRHKLPHELISDGDPFAPPADELEILRDE
VKQLLSATIEETIGGTTERAIRGSMGGTIGGRNA
>Mature_434_residues
MFTFLHVADLHLDSPLKGLEEYPDAPLKQLRHATRRAFDNVVQMALDERVAFVVVAGDLYDTDWRDYNTGLFFVSRMAKL
REAGIPVIIVSGNHDAASQITRSLRLPDNVKILSHTHPESYLLEPYNVAIHGQSFATRFVRDDLARNYPQADPSLFTIGL
LHTSLETSGDVYAPTTLDLLRSKGYNYWALGHMHRHEVVHRNPWVVYTGNIQGRHIREGGAKGCMLVTVENDAVVQTEWR
AVDVLRWARCAVLLEGCDSMEQVYHLVRERMEELRQQAEGRPLALRVQLRGATPLHHTLHTKIGHVMEEIRAIAVSFGDC
WLEKVELELSAPHAKSDLLGAASPLASLLEAVDALELPDGSLTSLLPDFEKLRHKLPHELISDGDPFAPPADELEILRDE
VKQLLSATIEETIGGTTERAIRGSMGGTIGGRNA

Specific function: Unknown

COG id: COG0420

COG function: function code L; DNA repair exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallophosphoesterase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004843
- InterPro:   IPR014576 [H]

Pfam domain/function: PF00149 Metallophos [H]

EC number: NA

Molecular weight: Translated: 48451; Mature: 48451

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTFLHVADLHLDSPLKGLEEYPDAPLKQLRHATRRAFDNVVQMALDERVAFVVVAGDLY
CCEEEEEEHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC
DTDWRDYNTGLFFVSRMAKLREAGIPVIIVSGNHDAASQITRSLRLPDNVKILSHTHPES
CCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCEEEEECCCCCH
YLLEPYNVAIHGQSFATRFVRDDLARNYPQADPSLFTIGLLHTSLETSGDVYAPTTLDLL
HEECCEEEEEECHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHCCCCCEECCHHHHHH
RSKGYNYWALGHMHRHEVVHRNPWVVYTGNIQGRHIREGGAKGCMLVTVENDAVVQTEWR
HHCCCCEEEECCHHHHHHHCCCCEEEEECCCCCCEECCCCCCCEEEEEECCCEEEEECHH
AVDVLRWARCAVLLEGCDSMEQVYHLVRERMEELRQQAEGRPLALRVQLRGATPLHHTLH
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHH
TKIGHVMEEIRAIAVSFGDCWLEKVELELSAPHAKSDLLGAASPLASLLEAVDALELPDG
HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
SLTSLLPDFEKLRHKLPHELISDGDPFAPPADELEILRDEVKQLLSATIEETIGGTTERA
CHHHHCHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
IRGSMGGTIGGRNA
HHCCCCCCCCCCCC
>Mature Secondary Structure
MFTFLHVADLHLDSPLKGLEEYPDAPLKQLRHATRRAFDNVVQMALDERVAFVVVAGDLY
CCEEEEEEHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC
DTDWRDYNTGLFFVSRMAKLREAGIPVIIVSGNHDAASQITRSLRLPDNVKILSHTHPES
CCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCCCEEEEECCCCCH
YLLEPYNVAIHGQSFATRFVRDDLARNYPQADPSLFTIGLLHTSLETSGDVYAPTTLDLL
HEECCEEEEEECHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHCCCCCEECCHHHHHH
RSKGYNYWALGHMHRHEVVHRNPWVVYTGNIQGRHIREGGAKGCMLVTVENDAVVQTEWR
HHCCCCEEEECCHHHHHHHCCCCEEEEECCCCCCEECCCCCCCEEEEEECCCEEEEECHH
AVDVLRWARCAVLLEGCDSMEQVYHLVRERMEELRQQAEGRPLALRVQLRGATPLHHTLH
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHH
TKIGHVMEEIRAIAVSFGDCWLEKVELELSAPHAKSDLLGAASPLASLLEAVDALELPDG
HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
SLTSLLPDFEKLRHKLPHELISDGDPFAPPADELEILRDEVKQLLSATIEETIGGTTERA
CHHHHCHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
IRGSMGGTIGGRNA
HHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]