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The map label for this gene is 78189044

Identifier: 78189044

GI number: 78189044

Start: 1459223

End: 1459624

Strand: Reverse

Name: 78189044

Synonym: Cag_1077

Alternate gene names: NA

Gene position: 1459624-1459223 (Counterclockwise)

Preceding gene: 78189045

Following gene: 78189043

Centisome position: 56.75

GC content: 39.55

Gene sequence:

>402_bases
GTGAAAGCACTTGATACCAATATACTTGTTCGCTTTCTTGTTCGTGACAATCAGGAACAGGCAGAGCGTGTTTATCGTCT
TTTTAAAGCAGCCGAAGCTGATAAAACTCTCTTTTTTATCTCAATTCCCGTTCTTCTTGAACTGATTTGGGTGCTTGATT
CTGTATATGGAATTGCACGGTATGACATACTCAATGCGATTGAAGAGCTTTTGCTTTTGCCCATATTAAGCTTTGATGGT
CAGCCTGCAGTAAGGAGTTTTATTGCTGAGGCTCGAAATAATAACCTTGATCTTTCGGATCTTTTGATTGCTTGTGATGC
GGCATTGTCAGGTTGTGAGCAGATGTTGACGTTTGATAAAAAGGCTGCAAAGTCAGAGCTTTTTATCTTGCTTGAAATAT
GA

Upstream 100 bases:

>100_bases
TTGATGATCTTTTCGGCAGGTTGTTTGACCCTACAAGAAAAGCTTTCTCAACCGAGGCGATTAATGATGCACTTCGTCAA
AAATTCCAACATGACGAGCA

Downstream 100 bases:

>100_bases
GAGGATGTCAACAATAACCAGACCAATGACCACCATGATCCTCAAGCAGCGCTTTCCATTCCGCTTCGGAACAAGTTCCT
ACATCATCCCTGCCGATATT

Product: hypothetical protein

Products: NA

Alternate protein names: PilT Domain-Containing Protein; PilT Protein Domain-Containing Protein; PilT Protein-Like; PilT Protein

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MKALDTNILVRFLVRDNQEQAERVYRLFKAAEADKTLFFISIPVLLELIWVLDSVYGIARYDILNAIEELLLLPILSFDG
QPAVRSFIAEARNNNLDLSDLLIACDAALSGCEQMLTFDKKAAKSELFILLEI

Sequences:

>Translated_133_residues
MKALDTNILVRFLVRDNQEQAERVYRLFKAAEADKTLFFISIPVLLELIWVLDSVYGIARYDILNAIEELLLLPILSFDG
QPAVRSFIAEARNNNLDLSDLLIACDAALSGCEQMLTFDKKAAKSELFILLEI
>Mature_133_residues
MKALDTNILVRFLVRDNQEQAERVYRLFKAAEADKTLFFISIPVLLELIWVLDSVYGIARYDILNAIEELLLLPILSFDG
QPAVRSFIAEARNNNLDLSDLLIACDAALSGCEQMLTFDKKAAKSELFILLEI

Specific function: Unknown

COG id: COG5611

COG function: function code R; Predicted nucleic-acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15051; Mature: 15051

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALDTNILVRFLVRDNQEQAERVYRLFKAAEADKTLFFISIPVLLELIWVLDSVYGIAR
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHH
YDILNAIEELLLLPILSFDGQPAVRSFIAEARNNNLDLSDLLIACDAALSGCEQMLTFDK
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
KAAKSELFILLEI
HHCCCCEEEEEEC
>Mature Secondary Structure
MKALDTNILVRFLVRDNQEQAERVYRLFKAAEADKTLFFISIPVLLELIWVLDSVYGIAR
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHH
YDILNAIEELLLLPILSFDGQPAVRSFIAEARNNNLDLSDLLIACDAALSGCEQMLTFDK
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
KAAKSELFILLEI
HHCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA