Click here to switch to the map view.

The map label for this gene is 78189045

Identifier: 78189045

GI number: 78189045

Start: 1459621

End: 1459869

Strand: Reverse

Name: 78189045

Synonym: Cag_1078

Alternate gene names: NA

Gene position: 1459869-1459621 (Counterclockwise)

Preceding gene: 78189046

Following gene: 78189044

Centisome position: 56.76

GC content: 42.97

Gene sequence:

>249_bases
ATGCCCATTACAACCATGACAAGCAAAGGACAAGTCACCATTCCGAAAGAGATTCGGGATCTCCTTGAACTGCACTCTGG
CGACAGGCTTGAGTTTACTTTTGAAAAATGGGGCAGACTTGTTGTTTCTCCAGTGAAAAAAAATGTTGATGATCTTTTCG
GCAGGTTGTTTGACCCTACAAGAAAAGCTTTCTCAACCGAGGCGATTAATGATGCACTTCGTCAAAAATTCCAACATGAC
GAGCAGTGA

Upstream 100 bases:

>100_bases
TTATTGAGGATTTCTGTATGACTTCCTTTTTATGATAAAAGATTCTCCTTATTTTCCTTACCTATAGCAAGATTCTGTAA
TTAACGTAAGGAGACCGCAG

Downstream 100 bases:

>100_bases
AAGCACTTGATACCAATATACTTGTTCGCTTTCTTGTTCGTGACAATCAGGAACAGGCAGAGCGTGTTTATCGTCTTTTT
AAAGCAGCCGAAGCTGATAA

Product: AbrB family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AbrB Family

Number of amino acids: Translated: 82; Mature: 81

Protein sequence:

>82_residues
MPITTMTSKGQVTIPKEIRDLLELHSGDRLEFTFEKWGRLVVSPVKKNVDDLFGRLFDPTRKAFSTEAINDALRQKFQHD
EQ

Sequences:

>Translated_82_residues
MPITTMTSKGQVTIPKEIRDLLELHSGDRLEFTFEKWGRLVVSPVKKNVDDLFGRLFDPTRKAFSTEAINDALRQKFQHD
EQ
>Mature_81_residues
PITTMTSKGQVTIPKEIRDLLELHSGDRLEFTFEKWGRLVVSPVKKNVDDLFGRLFDPTRKAFSTEAINDALRQKFQHDE
Q

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9519; Mature: 9388

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPITTMTSKGQVTIPKEIRDLLELHSGDRLEFTFEKWGRLVVSPVKKNVDDLFGRLFDPT
CCCCCCCCCCCEECCHHHHHHHHHCCCCCEEEEHHHHCHHHHHHHHCCHHHHHHHHHCHH
RKAFSTEAINDALRQKFQHDEQ
HHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PITTMTSKGQVTIPKEIRDLLELHSGDRLEFTFEKWGRLVVSPVKKNVDDLFGRLFDPT
CCCCCCCCCCEECCHHHHHHHHHCCCCCEEEEHHHHCHHHHHHHHCCHHHHHHHHHCHH
RKAFSTEAINDALRQKFQHDEQ
HHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA