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The map label for this gene is kdsC [H]

Identifier: 78189040

GI number: 78189040

Start: 1455526

End: 1456044

Strand: Reverse

Name: kdsC [H]

Synonym: Cag_1073

Alternate gene names: 78189040

Gene position: 1456044-1455526 (Counterclockwise)

Preceding gene: 78189043

Following gene: 78189039

Centisome position: 56.61

GC content: 47.78

Gene sequence:

>519_bases
ATGCTTACTCTATCTCAAAACGAATTAGTGCGGCGTGCACAAGCCATCCGATTAGTAATTGCTGATAACGATGGCGTTTT
TACCGATACGGGCGTTTATTACTCCGAGCGAGGTGAAGAGCTGAAGCGTTATTCCATTCGTGATGGCATGGGGGTTGAAC
GGTTGCGCAATGCTGGTATTGAAACCTGCATTATGACGGGTGAACGTTCACCCAATGTGCAAAAGCGGGCAGAAAAATTG
TGCATGAAGTGGCTCTACCTTGGTGTGAAAGATAAGCGTTCCATGCTTGCAACCCTGCTTGCAGAAACAGGCATGGAGCG
CCATGAGTTGGCTTATATTGGCGATGATGTGAACGATTGTGGCATTATGGAGGAAATTGCTCCCTTTGGATTGGTAGCAG
CTCCGCGCGATGCTACTCGTTTTGTAGAGCCTTATCTCCATTATCGTGCTACGGCTGATGGTGGGCATGGTGGCTTTCGC
GATATTGCGGAATGGCTGTTAGAGTTAAAGAATTCATAG

Upstream 100 bases:

>100_bases
CCACAAAACCCCCAAAGATAGCAATAAAGCCCCTCTTTAGAAGTGCCATGAAAACACTATATTGGGCGCCTTTGTTTGAA
ACATTTTTGTAGTAACCTTT

Downstream 100 bases:

>100_bases
CGCCTCTTTTTGAGAGCCTCTTTTAAAAAATTCTCCCTTTTTTTAACCTTAAACAAGGTGCGGCTTAAAGCGGCAAGGCT
TGTTTTATCTTCTTTTAATG

Product: phosphatase kdsC

Products: NA

Alternate protein names: KDO 8-P phosphatase [H]

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MLTLSQNELVRRAQAIRLVIADNDGVFTDTGVYYSERGEELKRYSIRDGMGVERLRNAGIETCIMTGERSPNVQKRAEKL
CMKWLYLGVKDKRSMLATLLAETGMERHELAYIGDDVNDCGIMEEIAPFGLVAAPRDATRFVEPYLHYRATADGGHGGFR
DIAEWLLELKNS

Sequences:

>Translated_172_residues
MLTLSQNELVRRAQAIRLVIADNDGVFTDTGVYYSERGEELKRYSIRDGMGVERLRNAGIETCIMTGERSPNVQKRAEKL
CMKWLYLGVKDKRSMLATLLAETGMERHELAYIGDDVNDCGIMEEIAPFGLVAAPRDATRFVEPYLHYRATADGGHGGFR
DIAEWLLELKNS
>Mature_172_residues
MLTLSQNELVRRAQAIRLVIADNDGVFTDTGVYYSERGEELKRYSIRDGMGVERLRNAGIETCIMTGERSPNVQKRAEKL
CMKWLYLGVKDKRSMLATLLAETGMERHELAYIGDDVNDCGIMEEIAPFGLVAAPRDATRFVEPYLHYRATADGGHGGFR
DIAEWLLELKNS

Specific function: Catalyzes the hydrolysis of KDO 8-P to KDO and inorganic phosphate [H]

COG id: COG1778

COG function: function code R; Low specificity phosphatase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the kdsC family [H]

Homologues:

Organism=Homo sapiens, GI8923900, Length=159, Percent_Identity=28.9308176100629, Blast_Score=70, Evalue=1e-12,
Organism=Escherichia coli, GI2367202, Length=160, Percent_Identity=34.375, Blast_Score=98, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006549
- InterPro:   IPR010023 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: =3.1.3.45 [H]

Molecular weight: Translated: 19404; Mature: 19404

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTLSQNELVRRAQAIRLVIADNDGVFTDTGVYYSERGEELKRYSIRDGMGVERLRNAGI
CCCCCHHHHHHHHHHEEEEEECCCCEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCC
ETCIMTGERSPNVQKRAEKLCMKWLYLGVKDKRSMLATLLAETGMERHELAYIGDDVNDC
CEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHEEEECCCCCCC
GIMEEIAPFGLVAAPRDATRFVEPYLHYRATADGGHGGFRDIAEWLLELKNS
HHHHHHCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MLTLSQNELVRRAQAIRLVIADNDGVFTDTGVYYSERGEELKRYSIRDGMGVERLRNAGI
CCCCCHHHHHHHHHHEEEEEECCCCEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCC
ETCIMTGERSPNVQKRAEKLCMKWLYLGVKDKRSMLATLLAETGMERHELAYIGDDVNDC
CEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHEEEECCCCCCC
GIMEEIAPFGLVAAPRDATRFVEPYLHYRATADGGHGGFRDIAEWLLELKNS
HHHHHHCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]