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The map label for this gene is 78188972

Identifier: 78188972

GI number: 78188972

Start: 1344306

End: 1345337

Strand: Reverse

Name: 78188972

Synonym: Cag_1005

Alternate gene names: NA

Gene position: 1345337-1344306 (Counterclockwise)

Preceding gene: 78188973

Following gene: 78188971

Centisome position: 52.31

GC content: 44.86

Gene sequence:

>1032_bases
GTGAAAAAATTTCTTAATACACTGTACGTAACCTCTCAAGGAGCGTATCTCTCAAAAGAGGGAGAATGTGCCGTTATAAG
CATTGAAAAAGAGGTAAAAACCCGCATTCCACTGCACATGCTCGATGGTATTATTTGCTTTGGCGCGGTAACGTGTAGCC
CTTTTTTGCTTGGGCATTGTGCAGAACAAGGGGTAACGGTTACCTTTTTAACACAATACGGGAAATATTTGTGTCAGGTA
CAGGGTGCAACACGAGGCAATATTTTATTGCGGCGGGCACAGTATCGAATAGCCGATAATGAAGCGCAATCAGCAGCACT
TTCCCGATCTTTTGTGATTGGAAAAATTGGTAATGCTCGCATTACACTTGCACGAACGTTACGCGACCATCCCGATAAGG
TAGATGCACTGCGTTTAAAGCAAGCGCAACATCATTTAGCCGAATGTATTCAGCACTTGCAGCATGAAACCAATCAAGAG
AGGATTCGAGGTATTGAAGGAGAGGCGGCAAAAGCATATTTCGAGGTGTTTAACGAGTGCATTACATCGCCTGATTCACA
CTTTCAGTTTAAGGGGCGTTCGCGGCGCCCACCATTAGATAGGGTAAACTGCTTGCTTTCATTTTTTTATACCCTCCTAA
CGCACGATGTTCGCTCTGCACTTGAAGCGTGTGGGCTTGACCCTGCTGCCGGATTTCTGCATAAAGATCGCCCTGGTCGC
CCCAGCCTTGCACTTGATATGGTTGAAGAGTTTCGCTCTTACATTGCTGATAGGTTAACGCTCACGCTCATCAATCGAGG
ACAAATTCATGCAAACGATTTTACCGTTTCGGAAACTGGTGCCGTGCTGCTTAAAGATGATGCTCGTAAAAAATTGCTGA
CAGCATGGCAAGAACGAAAACAAGAGGTAATAGAACACCCTTTTGTGAAAGAAAAAATGGAGGTAGGATTACTGTGGCAT
ATGCAAGCTATGCTGCTTGCTCGCCATATTCGTGGAGACCTTGATGTGTATCCACCTTTTGTATGGAAGTAA

Upstream 100 bases:

>100_bases
GTTCGTTGCTTGAGGTTTGCCAACCAAATCTTTTAGCACAACACAACACAGCAAGAAATTACCTTGCCTCACTTGTGCAA
ACGCTATCAGCGGAGGATGC

Downstream 100 bases:

>100_bases
GTTGCAACCCGCTGCAAGCTCATGGATTGAAACGGAGATAAAAGCATGATGGTATTAGTAACCTATGATGTAAATACCGA
ATCACCTGATGGTAAACGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MKKFLNTLYVTSQGAYLSKEGECAVISIEKEVKTRIPLHMLDGIICFGAVTCSPFLLGHCAEQGVTVTFLTQYGKYLCQV
QGATRGNILLRRAQYRIADNEAQSAALSRSFVIGKIGNARITLARTLRDHPDKVDALRLKQAQHHLAECIQHLQHETNQE
RIRGIEGEAAKAYFEVFNECITSPDSHFQFKGRSRRPPLDRVNCLLSFFYTLLTHDVRSALEACGLDPAAGFLHKDRPGR
PSLALDMVEEFRSYIADRLTLTLINRGQIHANDFTVSETGAVLLKDDARKKLLTAWQERKQEVIEHPFVKEKMEVGLLWH
MQAMLLARHIRGDLDVYPPFVWK

Sequences:

>Translated_343_residues
MKKFLNTLYVTSQGAYLSKEGECAVISIEKEVKTRIPLHMLDGIICFGAVTCSPFLLGHCAEQGVTVTFLTQYGKYLCQV
QGATRGNILLRRAQYRIADNEAQSAALSRSFVIGKIGNARITLARTLRDHPDKVDALRLKQAQHHLAECIQHLQHETNQE
RIRGIEGEAAKAYFEVFNECITSPDSHFQFKGRSRRPPLDRVNCLLSFFYTLLTHDVRSALEACGLDPAAGFLHKDRPGR
PSLALDMVEEFRSYIADRLTLTLINRGQIHANDFTVSETGAVLLKDDARKKLLTAWQERKQEVIEHPFVKEKMEVGLLWH
MQAMLLARHIRGDLDVYPPFVWK
>Mature_343_residues
MKKFLNTLYVTSQGAYLSKEGECAVISIEKEVKTRIPLHMLDGIICFGAVTCSPFLLGHCAEQGVTVTFLTQYGKYLCQV
QGATRGNILLRRAQYRIADNEAQSAALSRSFVIGKIGNARITLARTLRDHPDKVDALRLKQAQHHLAECIQHLQHETNQE
RIRGIEGEAAKAYFEVFNECITSPDSHFQFKGRSRRPPLDRVNCLLSFFYTLLTHDVRSALEACGLDPAAGFLHKDRPGR
PSLALDMVEEFRSYIADRLTLTLINRGQIHANDFTVSETGAVLLKDDARKKLLTAWQERKQEVIEHPFVKEKMEVGLLWH
MQAMLLARHIRGDLDVYPPFVWK

Specific function: Unknown

COG id: COG1518

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002729
- InterPro:   IPR019858 [H]

Pfam domain/function: PF01867 DUF48 [H]

EC number: NA

Molecular weight: Translated: 38916; Mature: 38916

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFLNTLYVTSQGAYLSKEGECAVISIEKEVKTRIPLHMLDGIICFGAVTCSPFLLGHC
CHHHHHHHEEECCCCEECCCCCEEEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
AEQGVTVTFLTQYGKYLCQVQGATRGNILLRRAQYRIADNEAQSAALSRSFVIGKIGNAR
HHCCCEEEHHHHHHHHHEEECCCCCCCCEEEHHHHHHCCCHHHHHHHHHHHEEEECCCCE
ITLARTLRDHPDKVDALRLKQAQHHLAECIQHLQHETNQERIRGIEGEAAKAYFEVFNEC
EEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHH
ITSPDSHFQFKGRSRRPPLDRVNCLLSFFYTLLTHDVRSALEACGLDPAAGFLHKDRPGR
HCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC
PSLALDMVEEFRSYIADRLTLTLINRGQIHANDFTVSETGAVLLKDDARKKLLTAWQERK
CHHHHHHHHHHHHHHHHHHEEEEEECCEEECCCEEECCCCEEEECCHHHHHHHHHHHHHH
QEVIEHPFVKEKMEVGLLWHMQAMLLARHIRGDLDVYPPFVWK
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKKFLNTLYVTSQGAYLSKEGECAVISIEKEVKTRIPLHMLDGIICFGAVTCSPFLLGHC
CHHHHHHHEEECCCCEECCCCCEEEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
AEQGVTVTFLTQYGKYLCQVQGATRGNILLRRAQYRIADNEAQSAALSRSFVIGKIGNAR
HHCCCEEEHHHHHHHHHEEECCCCCCCCEEEHHHHHHCCCHHHHHHHHHHHEEEECCCCE
ITLARTLRDHPDKVDALRLKQAQHHLAECIQHLQHETNQERIRGIEGEAAKAYFEVFNEC
EEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHH
ITSPDSHFQFKGRSRRPPLDRVNCLLSFFYTLLTHDVRSALEACGLDPAAGFLHKDRPGR
HCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCC
PSLALDMVEEFRSYIADRLTLTLINRGQIHANDFTVSETGAVLLKDDARKKLLTAWQERK
CHHHHHHHHHHHHHHHHHHEEEEEECCEEECCCEEECCCCEEEECCHHHHHHHHHHHHHH
QEVIEHPFVKEKMEVGLLWHMQAMLLARHIRGDLDVYPPFVWK
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]