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The map label for this gene is 78188941

Identifier: 78188941

GI number: 78188941

Start: 1312099

End: 1312830

Strand: Reverse

Name: 78188941

Synonym: Cag_0973

Alternate gene names: NA

Gene position: 1312830-1312099 (Counterclockwise)

Preceding gene: 78188942

Following gene: 78188940

Centisome position: 51.04

GC content: 39.89

Gene sequence:

>732_bases
ATGGCTATCTTAGGAAAAATTTTCGGTAGCGATTCCCCGAAAAGCAGCAACACACCACAAGCATTTACTATTAAGGTTGA
TCCTGCAAAATTCGCGCTCTCTACAAAACCGCAGGGCAGCATTCATATTCAGCTTGAAGCGCTTAAGCAAAAGCTCACCA
AACTTTCCTCCAATGTTGAAAATAACTTGATGCTTGCTATTCGTGCTTCCACCAAAGGGAATGCAGAGCTTGCGGCTTCA
GCTTTTAAGTTTGATGAAGAGTACATTCGTAAAGGCAAGTTTGAGGTTGAGTATCTTGTGCTGGCTTATGCCCATTTTCA
GAATCTCACGGGCGATGATTTGCAAGCCATTAAGTATGCTCACTTAATTTTGCGCGATCTTGAGCGCTTAGCCATGATAT
CGCTCAACATTGCCGATAAAGCTGACTATGTAAAATTTGCAAACGTACAAGAGTTGCATAAAGATGAGTATGATTTAAAG
CCAATGGGCGATATTACTGCCGAAATGATTAAGAAAGCTGTTGAAGCTTTTGTAAGCGGTAACTCAAAACATGCCAGCGA
AACCTTGGTGATGATGAACGAAATTCAATCAATTTATGATAAGGCTGTAGCAAAAATGACCTCATCAGTGAATGATGGCA
ATATTAGAAACCTTACTGGTATTCTTTCAATTGTTGAACAAACAAAGTCAGCGGCTGATATTTCATGTTCAATGGCAAGT
AACTTCTGTTAA

Upstream 100 bases:

>100_bases
ACTTTTTCAATCATAAACTTGCATTTAAGGTAGCTCCTCAAGTACATTAAGGCACATTTTTACCATCTTCTTAATTTTTT
AAAGTAAGCTCCTTATCTCT

Downstream 100 bases:

>100_bases
TTGTTCTTAATCGGTTTTTTACGAGAATTTAAAAGCGGACTTCGGTTCGCTTTTTTATTTTTAAGGAAAGATGATGTGTT
AGAAAGAACCCGTGTTATGA

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MAILGKIFGSDSPKSSNTPQAFTIKVDPAKFALSTKPQGSIHIQLEALKQKLTKLSSNVENNLMLAIRASTKGNAELAAS
AFKFDEEYIRKGKFEVEYLVLAYAHFQNLTGDDLQAIKYAHLILRDLERLAMISLNIADKADYVKFANVQELHKDEYDLK
PMGDITAEMIKKAVEAFVSGNSKHASETLVMMNEIQSIYDKAVAKMTSSVNDGNIRNLTGILSIVEQTKSAADISCSMAS
NFC

Sequences:

>Translated_243_residues
MAILGKIFGSDSPKSSNTPQAFTIKVDPAKFALSTKPQGSIHIQLEALKQKLTKLSSNVENNLMLAIRASTKGNAELAAS
AFKFDEEYIRKGKFEVEYLVLAYAHFQNLTGDDLQAIKYAHLILRDLERLAMISLNIADKADYVKFANVQELHKDEYDLK
PMGDITAEMIKKAVEAFVSGNSKHASETLVMMNEIQSIYDKAVAKMTSSVNDGNIRNLTGILSIVEQTKSAADISCSMAS
NFC
>Mature_242_residues
AILGKIFGSDSPKSSNTPQAFTIKVDPAKFALSTKPQGSIHIQLEALKQKLTKLSSNVENNLMLAIRASTKGNAELAASA
FKFDEEYIRKGKFEVEYLVLAYAHFQNLTGDDLQAIKYAHLILRDLERLAMISLNIADKADYVKFANVQELHKDEYDLKP
MGDITAEMIKKAVEAFVSGNSKHASETLVMMNEIQSIYDKAVAKMTSSVNDGNIRNLTGILSIVEQTKSAADISCSMASN
FC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26749; Mature: 26618

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAILGKIFGSDSPKSSNTPQAFTIKVDPAKFALSTKPQGSIHIQLEALKQKLTKLSSNVE
CCEEECHHCCCCCCCCCCCCEEEEEECCHHEEECCCCCCCEEEEHHHHHHHHHHHHCCCC
NNLMLAIRASTKGNAELAASAFKFDEEYIRKGKFEVEYLVLAYAHFQNLTGDDLQAIKYA
CCEEEEEEECCCCCHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHH
HLILRDLERLAMISLNIADKADYVKFANVQELHKDEYDLKPMGDITAEMIKKAVEAFVSG
HHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC
NSKHASETLVMMNEIQSIYDKAVAKMTSSVNDGNIRNLTGILSIVEQTKSAADISCSMAS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEHHHHC
NFC
CCC
>Mature Secondary Structure 
AILGKIFGSDSPKSSNTPQAFTIKVDPAKFALSTKPQGSIHIQLEALKQKLTKLSSNVE
CEEECHHCCCCCCCCCCCCEEEEEECCHHEEECCCCCCCEEEEHHHHHHHHHHHHCCCC
NNLMLAIRASTKGNAELAASAFKFDEEYIRKGKFEVEYLVLAYAHFQNLTGDDLQAIKYA
CCEEEEEEECCCCCHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHH
HLILRDLERLAMISLNIADKADYVKFANVQELHKDEYDLKPMGDITAEMIKKAVEAFVSG
HHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC
NSKHASETLVMMNEIQSIYDKAVAKMTSSVNDGNIRNLTGILSIVEQTKSAADISCSMAS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHEEHHHHC
NFC
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA