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The map label for this gene is nolF [H]

Identifier: 78188940

GI number: 78188940

Start: 1310941

End: 1312002

Strand: Reverse

Name: nolF [H]

Synonym: Cag_0972

Alternate gene names: 78188940

Gene position: 1312002-1310941 (Counterclockwise)

Preceding gene: 78188941

Following gene: 78188939

Centisome position: 51.01

GC content: 52.54

Gene sequence:

>1062_bases
ATGAAACGTCGAACCTTTATTGTGATTATTGCTGGAGTACTTGCTTCGGTGGTTGGTGGCTATTTGGTGCTGCATCAAGA
AAAACAAGAAGCCCCAAAAATTGCCGTGCAAGCCGAGCGCCCCATTCCAGTATCTATTGTGGCTGTTGCCGCCGCAACCG
TGAGCGATACGCTTAACCTTGTGGGCGAAATACAAGCTATTCGTGAAGCCGATATTGTGGCTGAAGTGGAAGGGCAGGTG
CGTCGCATAGCGGTGGAGCCCGGTGAGCGTAAAGAGAAGGGGGCGCTGTTAGTGGCGCTTGATGATGAGGTAGCAGCAGC
TCGCAAGAAAAAAGCGGAGCTGCATTACCGTCAAGCAGCTCGCACGGCTGAGCGCTATAGTGCGCTTTACCGCGACGGCG
CTGTGTCGCTTTCAGCGTATGAAGCTATGGAGTTGCAGCGTGAGGAGGCGCAAGCCGAATTGGTGTCGGCAACAAAGCAT
ATGCAAAATGCAGCAATTCGCGCACCATTCGGTGGTGTGGTAACCTCGCGCCTTGTAAGCGAAGGGGAGTTGGTGCGTGT
TGGCACAAAAGTGGCACACATGGCAGATTTTTCGCGCACCAAAGTGGTGCTTTATGCGCCTGAGCGCACATTGCCGCTTT
TTGTGCTGGGCAAATCGGTGCTTGTAAGCAGCAACCTTTTCCCCGATAAACGCTTTAGCGGCAAAGTAAGTGCTATTAGC
GATCGTGCTGAAAGGGCGCACAATTATCGCATTGAAGTGCTGTTGAATAATGAAAGTCGCTCGATTCCTTTCCGTTCAGG
CATGTTTGCACGAGTGTTGGTGCCAAGCGAAGGGGAGCGTCAAGCGCTGGTGGTGCCACGTCGAGCATTGGTGAACGGGA
TGCGCAATCCTGCAATTTTTGTGGTGCGCAACGGACGAGCATGGTTTACACCCATTATTGCAGGTATGGAAATGCCGCGC
GAATTTGAAGTGCTTGGTGGCTTAGTAGCTGGCGATAGCGTTATTGTGAGTGGTCAACAAGAGCTGCGCGATAAAGCACG
GGTTGAGGTGGTTCATCGCTAA

Upstream 100 bases:

>100_bases
TTAATTGTTCTTAATCGGTTTTTTACGAGAATTTAAAAGCGGACTTCGGTTCGCTTTTTTATTTTTAAGGAAAGATGATG
TGTTAGAAAGAACCCGTGTT

Downstream 100 bases:

>100_bases
TCCTTCAAAAGAGTATCCATGACGCTTACTGAGCTTTCCATAAAACGCCCCACGCTGATTGTGGTATTTTTTACCGTACT
TGCAATCCTTGGCTTGTTTA

Product: secretion protein HlyD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MKRRTFIVIIAGVLASVVGGYLVLHQEKQEAPKIAVQAERPIPVSIVAVAAATVSDTLNLVGEIQAIREADIVAEVEGQV
RRIAVEPGERKEKGALLVALDDEVAAARKKKAELHYRQAARTAERYSALYRDGAVSLSAYEAMELQREEAQAELVSATKH
MQNAAIRAPFGGVVTSRLVSEGELVRVGTKVAHMADFSRTKVVLYAPERTLPLFVLGKSVLVSSNLFPDKRFSGKVSAIS
DRAERAHNYRIEVLLNNESRSIPFRSGMFARVLVPSEGERQALVVPRRALVNGMRNPAIFVVRNGRAWFTPIIAGMEMPR
EFEVLGGLVAGDSVIVSGQQELRDKARVEVVHR

Sequences:

>Translated_353_residues
MKRRTFIVIIAGVLASVVGGYLVLHQEKQEAPKIAVQAERPIPVSIVAVAAATVSDTLNLVGEIQAIREADIVAEVEGQV
RRIAVEPGERKEKGALLVALDDEVAAARKKKAELHYRQAARTAERYSALYRDGAVSLSAYEAMELQREEAQAELVSATKH
MQNAAIRAPFGGVVTSRLVSEGELVRVGTKVAHMADFSRTKVVLYAPERTLPLFVLGKSVLVSSNLFPDKRFSGKVSAIS
DRAERAHNYRIEVLLNNESRSIPFRSGMFARVLVPSEGERQALVVPRRALVNGMRNPAIFVVRNGRAWFTPIIAGMEMPR
EFEVLGGLVAGDSVIVSGQQELRDKARVEVVHR
>Mature_353_residues
MKRRTFIVIIAGVLASVVGGYLVLHQEKQEAPKIAVQAERPIPVSIVAVAAATVSDTLNLVGEIQAIREADIVAEVEGQV
RRIAVEPGERKEKGALLVALDDEVAAARKKKAELHYRQAARTAERYSALYRDGAVSLSAYEAMELQREEAQAELVSATKH
MQNAAIRAPFGGVVTSRLVSEGELVRVGTKVAHMADFSRTKVVLYAPERTLPLFVLGKSVLVSSNLFPDKRFSGKVSAIS
DRAERAHNYRIEVLLNNESRSIPFRSGMFARVLVPSEGERQALVVPRRALVNGMRNPAIFVVRNGRAWFTPIIAGMEMPR
EFEVLGGLVAGDSVIVSGQQELRDKARVEVVHR

Specific function: Involved in the production of Medicago-specific nodulation signal molecule [H]

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 38692; Mature: 38692

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRTFIVIIAGVLASVVGGYLVLHQEKQEAPKIAVQAERPIPVSIVAVAAATVSDTLNL
CCCEEEEEEHHHHHHHHHCCEEEEECCHHCCCCEEEEECCCCCEEHHHHHHHHHHHHHHH
VGEIQAIREADIVAEVEGQVRRIAVEPGERKEKGALLVALDDEVAAARKKKAELHYRQAA
HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
RTAERYSALYRDGAVSLSAYEAMELQREEAQAELVSATKHMQNAAIRAPFGGVVTSRLVS
HHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCHHHHHHHHC
EGELVRVGTKVAHMADFSRTKVVLYAPERTLPLFVLGKSVLVSSNLFPDKRFSGKVSAIS
CCCEEEECHHHHHHHCCCCCEEEEECCCCCCEEEEECCHHEEECCCCCCCCCCCCHHHHH
DRAERAHNYRIEVLLNNESRSIPFRSGMFARVLVPSEGERQALVVPRRALVNGMRNPAIF
HHHHHCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCEEEECHHHHHCCCCCCEEE
VVRNGRAWFTPIIAGMEMPREFEVLGGLVAGDSVIVSGQQELRDKARVEVVHR
EEECCCEEEHHHHHCCCCCHHHHHHHHEEECCEEEECCHHHHHHHHHEEEECC
>Mature Secondary Structure
MKRRTFIVIIAGVLASVVGGYLVLHQEKQEAPKIAVQAERPIPVSIVAVAAATVSDTLNL
CCCEEEEEEHHHHHHHHHCCEEEEECCHHCCCCEEEEECCCCCEEHHHHHHHHHHHHHHH
VGEIQAIREADIVAEVEGQVRRIAVEPGERKEKGALLVALDDEVAAARKKKAELHYRQAA
HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
RTAERYSALYRDGAVSLSAYEAMELQREEAQAELVSATKHMQNAAIRAPFGGVVTSRLVS
HHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCHHHHHHHHC
EGELVRVGTKVAHMADFSRTKVVLYAPERTLPLFVLGKSVLVSSNLFPDKRFSGKVSAIS
CCCEEEECHHHHHHHCCCCCEEEEECCCCCCEEEEECCHHEEECCCCCCCCCCCCHHHHH
DRAERAHNYRIEVLLNNESRSIPFRSGMFARVLVPSEGERQALVVPRRALVNGMRNPAIF
HHHHHCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCEEEECHHHHHCCCCCCEEE
VVRNGRAWFTPIIAGMEMPREFEVLGGLVAGDSVIVSGQQELRDKARVEVVHR
EEECCCEEEHHHHHCCCCCHHHHHHHHEEECCEEEECCHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1909418; 11481432 [H]