| Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
|---|---|
| Accession | NC_007514 |
| Length | 2,572,079 |
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The map label for this gene is 78188757
Identifier: 78188757
GI number: 78188757
Start: 1104450
End: 1104710
Strand: Reverse
Name: 78188757
Synonym: Cag_0786
Alternate gene names: NA
Gene position: 1104710-1104450 (Counterclockwise)
Preceding gene: 78188758
Following gene: 78188756
Centisome position: 42.95
GC content: 36.78
Gene sequence:
>261_bases GTGGGATCATTAACTGTAAAGGATTACGTTATGTTAAAAATGGCTTTTTCATCAAAACAGCATGCATTTTTAGCTGGATT CGGAAGCCTTTTCGACTTCACGGGGCATAAACTTAATGCTAAACATTTTGGTAACCAACTAACCGATAGAAGTGCACTAC AAGCTGATTGGTATGCAATTAGTAATGATATACACAAAGCTTCAAACGCAGTAGTTACTGAAATGGCAAATACAAAAGCC ACACGCAATGCATCAAAATAG
Upstream 100 bases:
>100_bases TAATGCCGAGTACCTAAAACTTAGTTAAACATCCCGTTTAGTGGTATGGTGGTGCTCTAAAAATATTTGCGCTATATCGT ATTGTTTCTATCTTTAAGCA
Downstream 100 bases:
>100_bases TGATGAAAACCTGCAAGCTGATATTGTTTCTGAACAAAGCTTGCAGGTAACTAAATCGTTGCAAGCTTTTAGTGGTCCAT TACCACATCCTGATCTTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MGSLTVKDYVMLKMAFSSKQHAFLAGFGSLFDFTGHKLNAKHFGNQLTDRSALQADWYAISNDIHKASNAVVTEMANTKA TRNASK
Sequences:
>Translated_86_residues MGSLTVKDYVMLKMAFSSKQHAFLAGFGSLFDFTGHKLNAKHFGNQLTDRSALQADWYAISNDIHKASNAVVTEMANTKA TRNASK >Mature_85_residues GSLTVKDYVMLKMAFSSKQHAFLAGFGSLFDFTGHKLNAKHFGNQLTDRSALQADWYAISNDIHKASNAVVTEMANTKAT RNASK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9455; Mature: 9324
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSLTVKDYVMLKMAFSSKQHAFLAGFGSLFDFTGHKLNAKHFGNQLTDRSALQADWYAI CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEECHHHCCCCCCCCCHHHHHHHHH SNDIHKASNAVVTEMANTKATRNASK HHHHHHHCCHHHHHHHCCCCCCCCCC >Mature Secondary Structure GSLTVKDYVMLKMAFSSKQHAFLAGFGSLFDFTGHKLNAKHFGNQLTDRSALQADWYAI CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEECHHHCCCCCCCCCHHHHHHHHH SNDIHKASNAVVTEMANTKATRNASK HHHHHHHCCHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA