| Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
|---|---|
| Accession | NC_007514 |
| Length | 2,572,079 |
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The map label for this gene is 78188668
Identifier: 78188668
GI number: 78188668
Start: 964915
End: 965568
Strand: Reverse
Name: 78188668
Synonym: Cag_0692
Alternate gene names: NA
Gene position: 965568-964915 (Counterclockwise)
Preceding gene: 78188672
Following gene: 78188667
Centisome position: 37.54
GC content: 47.09
Gene sequence:
>654_bases ATGGACAACGCATCATCATCACGATTGCTGAAAACAGCCTTATTACTTGGAATAATCACCATCGGCTACAACGTGATAGA AGGAATCGTAAGCGTATGGTTTGGTTTGCAAGATGAAACACTTGCATTGTTTGGATTTGGGATAGATAGCTTTGTGGAAG TGCTTTCCGGCGCCGCCATTGTACACATGGTAGTACGAATGCAAAAAAGTGCCGTACATGCACGAGACCAATTTGAACGC CAAGCGCTTCGAATAACAGGCTGGGCATTTTACCTGCTTGCATTTGGAATGGTGGTTGGTGCCGCTGTTACGCTGCTGCA ACAGCACCATCCCGAAACAACGCTTTCGGGAATTATGGTGTCGCTCATTTCCCTTGCCTCCATGTGGTGGCTCATGCAAG CCAAAATGAAGGTTGGCAACGCCTTGCATTCAGAAGCCATTCTTGCTGATGCTAACTGTACAAAAACCTGCCTTATGCTT TCGGGGTTGCTGCTTGCTTCAAGCTTGTTGTACGAATTGTTTCATATTGCTCAGGTGGATGCTATCGGTTCAATCGGCAT TGCATGGTTTGCATGGAGCGAAGGCAAGGAAGCACTTGAAAAAGCTCGGAGTGGAAAGTTGGGATGCTGTTGTAGTGGGA GTTGTAAGGGGTGA
Upstream 100 bases:
>100_bases AAATGGTTAGGCTCAATATACCATTCAAATTTTTTGCCAATTGAGAAGATGGTTACTTTGTGGAGAAATGTGGCACATTC ACTTTTGAAAAATCTCCGCT
Downstream 100 bases:
>100_bases AGATTGTTATCATGTTTTTTTAACTGACAATGTAATAAGAGAAACATATGAACGAAGGTATATTGCTCTCTTAAGACTTT GTATCTTAGTATATACATCA
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein; Co/Zn/Cd Cation Transporter-Like Protein; Cation Efflux Family Protein; Co/Zn/Cd Cation Transporters-Like Protein; Co/Zn/Cd Cation Transporter
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MDNASSSRLLKTALLLGIITIGYNVIEGIVSVWFGLQDETLALFGFGIDSFVEVLSGAAIVHMVVRMQKSAVHARDQFER QALRITGWAFYLLAFGMVVGAAVTLLQQHHPETTLSGIMVSLISLASMWWLMQAKMKVGNALHSEAILADANCTKTCLML SGLLLASSLLYELFHIAQVDAIGSIGIAWFAWSEGKEALEKARSGKLGCCCSGSCKG
Sequences:
>Translated_217_residues MDNASSSRLLKTALLLGIITIGYNVIEGIVSVWFGLQDETLALFGFGIDSFVEVLSGAAIVHMVVRMQKSAVHARDQFER QALRITGWAFYLLAFGMVVGAAVTLLQQHHPETTLSGIMVSLISLASMWWLMQAKMKVGNALHSEAILADANCTKTCLML SGLLLASSLLYELFHIAQVDAIGSIGIAWFAWSEGKEALEKARSGKLGCCCSGSCKG >Mature_217_residues MDNASSSRLLKTALLLGIITIGYNVIEGIVSVWFGLQDETLALFGFGIDSFVEVLSGAAIVHMVVRMQKSAVHARDQFER QALRITGWAFYLLAFGMVVGAAVTLLQQHHPETTLSGIMVSLISLASMWWLMQAKMKVGNALHSEAILADANCTKTCLML SGLLLASSLLYELFHIAQVDAIGSIGIAWFAWSEGKEALEKARSGKLGCCCSGSCKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23372; Mature: 23372
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNASSSRLLKTALLLGIITIGYNVIEGIVSVWFGLQDETLALFGFGIDSFVEVLSGAAI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHH VHMVVRMQKSAVHARDQFERQALRITGWAFYLLAFGMVVGAAVTLLQQHHPETTLSGIMV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH SLISLASMWWLMQAKMKVGNALHSEAILADANCTKTCLMLSGLLLASSLLYELFHIAQVD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIGSIGIAWFAWSEGKEALEKARSGKLGCCCSGSCKG HHHCHHHHEEEHHCCHHHHHHHHCCCCCEECCCCCCC >Mature Secondary Structure MDNASSSRLLKTALLLGIITIGYNVIEGIVSVWFGLQDETLALFGFGIDSFVEVLSGAAI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHH VHMVVRMQKSAVHARDQFERQALRITGWAFYLLAFGMVVGAAVTLLQQHHPETTLSGIMV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH SLISLASMWWLMQAKMKVGNALHSEAILADANCTKTCLMLSGLLLASSLLYELFHIAQVD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIGSIGIAWFAWSEGKEALEKARSGKLGCCCSGSCKG HHHCHHHHEEEHHCCHHHHHHHHCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA