| Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
|---|---|
| Accession | NC_007514 |
| Length | 2,572,079 |
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The map label for this gene is 78188667
Identifier: 78188667
GI number: 78188667
Start: 963044
End: 964783
Strand: Reverse
Name: 78188667
Synonym: Cag_0691
Alternate gene names: NA
Gene position: 964783-963044 (Counterclockwise)
Preceding gene: 78188668
Following gene: 78188666
Centisome position: 37.51
GC content: 42.76
Gene sequence:
>1740_bases ATGAGTAAACGAGAGGAATTGCTTCAGAGTTACGAGAACGGTAATTTTCTGGAAACGGTATATGCCTGCTCATCGAACGA TCACAATGATCGTAGTTCTGTTGTTTTTGACTTGGTTGCCCTAAATAATGAAGGGCTTATTGATGTTGTGGGGGCTTTTC AATCTTTAAAAAACGAGTCATCGAATAGTCCCGATTTTTTTTTGACTCGACATGTCTTTGAGAAAGCCTTGCCAGAACTT GAAGCCTCGGTACCAGCAGTCATGCACTGTGTTCTTCAGCTTTATCTGGATGCTGGACAGGACTTGGCCGCGAGTACGGT GATTAACAGCTTTTTCGATTTCTGTACCAAAAAAGCCTCTCGCCCGCATGAGGCACTTGAGGTGATTAAAGCAAGTCCAG GTAAGTTGGCCCACCTTCTTCCCGCAACGCTTATTGCTGGTTCTCAAATAGATTCATCATTTTACCTATGCGAAACGATG CGTCTTTGCAAAGACGAGAATATTGAGTTGAAAAGATGGGCTTTATTTTCGATCGGTAAATTAAATTTACCCGAAGATAT TAAAAAATTTGGTGATGCTCTTTCTGCATTGGAATATGCTGCGGTACAGGAAACGGACGATCAAATTCTCTCAAGCGTCA TCAAATCGGCATTTCCGCTTTTGCAAAGGGATAAGTCTCAGGAACCACGTGCCATCGCGATCATCATTTCTGCATTGCGA AAAGGAGATGATTACGTGCTTCATGCTGCATCAGAAATCTTTGGTTTTTATACAGGCGAGCTTCCAACTACACTTCGTGA AGCGTTCTTTGTTGATTTACTTCGCGTTAAGCCAACGCATAAAGGCACTTTGGACAACGTTGACTACGGTATCTCCCATT TGCTCAAGAACGGTAATTCTGAGCAGGCAATTCAGTTTTTAGAAGCCTTGCTGCTTAGGCATTCCGGTGAGCTAACGATA GAAGTCTTTGATAGTGCTATTAGTGAAATTGTGAGTAACAAGGCGTTCATCAGCAAAGTTCTCACCCGATGGTTTCTAAG GGGAGATCGGGTTTTATGTGAGGCTGTGCATGAGATAGTTTGGGCTCATCACGGAAGTGGTCTTTTGTTGGAGATTGATG TTACAGAGCTAAACCCCTCAGATTCTGGGCATATTCTTTTCATTGCTCGAAAAGCTATTGGGTACCTTTTCATGCAGCCA CTTAGTGCCGCTTCCGTTCTTATTTCACTTATGCGGAATGCCACAGATGATAAGGTTTTGAAAAAGCTAGGTGAGTTGCT TCTTGACCCTCTGCTCCTCAATTATACCGGTAAAGCAAGAGACTATATTATAAAACAGTCAGGAAGCGAATCGGGTAAGG TCAAAGAAACAATTGACAACGCACTCAAGGATATTAATACGTATCTGGAAGAATTACGTTCAGTTGGATCACTTTCGGCT CTGCATCCCAGTGAAGCACAACGAGAGGCGTATAATCGACATTATTCCCAACTTATGGCGGAATCATGGAAAGCAGCAGA AGCAAAGTCAGTTGTTCTGAATTTGTTTCCGAAAAGCGTGTTGCTGTATGGAAAAAAGTTGATCAATTATGTGTACGGCT CTGATGGGCAGTCTCATCGGCAGGAAATACCTTTGCAGTGTCTTGGTTCCGAAATGGAATATGCACGAATGCATATCTTC GATCCGTTTGGGATGGATTACATGCTGCGTGTTTTTAGAAACGAACAGCTCAAAACATGA
Upstream 100 bases:
>100_bases GTAATAAGAGAAACATATGAACGAAGGTATATTGCTCTCTTAAGACTTTGTATCTTAGTATATACATCATAAGATATTAC ATCAATATGAGGAACTTCTT
Downstream 100 bases:
>100_bases AACTCATTCTTAAAGAATACCTTTCATCTTTACGAGAGCGGGGCGAACTCGATGCAATTTTCCCCGATCTTTTGAGCCAG CTTGGCTTGAACGTTTATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 579; Mature: 578
Protein sequence:
>579_residues MSKREELLQSYENGNFLETVYACSSNDHNDRSSVVFDLVALNNEGLIDVVGAFQSLKNESSNSPDFFLTRHVFEKALPEL EASVPAVMHCVLQLYLDAGQDLAASTVINSFFDFCTKKASRPHEALEVIKASPGKLAHLLPATLIAGSQIDSSFYLCETM RLCKDENIELKRWALFSIGKLNLPEDIKKFGDALSALEYAAVQETDDQILSSVIKSAFPLLQRDKSQEPRAIAIIISALR KGDDYVLHAASEIFGFYTGELPTTLREAFFVDLLRVKPTHKGTLDNVDYGISHLLKNGNSEQAIQFLEALLLRHSGELTI EVFDSAISEIVSNKAFISKVLTRWFLRGDRVLCEAVHEIVWAHHGSGLLLEIDVTELNPSDSGHILFIARKAIGYLFMQP LSAASVLISLMRNATDDKVLKKLGELLLDPLLLNYTGKARDYIIKQSGSESGKVKETIDNALKDINTYLEELRSVGSLSA LHPSEAQREAYNRHYSQLMAESWKAAEAKSVVLNLFPKSVLLYGKKLINYVYGSDGQSHRQEIPLQCLGSEMEYARMHIF DPFGMDYMLRVFRNEQLKT
Sequences:
>Translated_579_residues MSKREELLQSYENGNFLETVYACSSNDHNDRSSVVFDLVALNNEGLIDVVGAFQSLKNESSNSPDFFLTRHVFEKALPEL EASVPAVMHCVLQLYLDAGQDLAASTVINSFFDFCTKKASRPHEALEVIKASPGKLAHLLPATLIAGSQIDSSFYLCETM RLCKDENIELKRWALFSIGKLNLPEDIKKFGDALSALEYAAVQETDDQILSSVIKSAFPLLQRDKSQEPRAIAIIISALR KGDDYVLHAASEIFGFYTGELPTTLREAFFVDLLRVKPTHKGTLDNVDYGISHLLKNGNSEQAIQFLEALLLRHSGELTI EVFDSAISEIVSNKAFISKVLTRWFLRGDRVLCEAVHEIVWAHHGSGLLLEIDVTELNPSDSGHILFIARKAIGYLFMQP LSAASVLISLMRNATDDKVLKKLGELLLDPLLLNYTGKARDYIIKQSGSESGKVKETIDNALKDINTYLEELRSVGSLSA LHPSEAQREAYNRHYSQLMAESWKAAEAKSVVLNLFPKSVLLYGKKLINYVYGSDGQSHRQEIPLQCLGSEMEYARMHIF DPFGMDYMLRVFRNEQLKT >Mature_578_residues SKREELLQSYENGNFLETVYACSSNDHNDRSSVVFDLVALNNEGLIDVVGAFQSLKNESSNSPDFFLTRHVFEKALPELE ASVPAVMHCVLQLYLDAGQDLAASTVINSFFDFCTKKASRPHEALEVIKASPGKLAHLLPATLIAGSQIDSSFYLCETMR LCKDENIELKRWALFSIGKLNLPEDIKKFGDALSALEYAAVQETDDQILSSVIKSAFPLLQRDKSQEPRAIAIIISALRK GDDYVLHAASEIFGFYTGELPTTLREAFFVDLLRVKPTHKGTLDNVDYGISHLLKNGNSEQAIQFLEALLLRHSGELTIE VFDSAISEIVSNKAFISKVLTRWFLRGDRVLCEAVHEIVWAHHGSGLLLEIDVTELNPSDSGHILFIARKAIGYLFMQPL SAASVLISLMRNATDDKVLKKLGELLLDPLLLNYTGKARDYIIKQSGSESGKVKETIDNALKDINTYLEELRSVGSLSAL HPSEAQREAYNRHYSQLMAESWKAAEAKSVVLNLFPKSVLLYGKKLINYVYGSDGQSHRQEIPLQCLGSEMEYARMHIFD PFGMDYMLRVFRNEQLKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64783; Mature: 64652
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKREELLQSYENGNFLETVYACSSNDHNDRSSVVFDLVALNNEGLIDVVGAFQSLKNES CCHHHHHHHHHCCCCHHHHHEECCCCCCCCHHHHHEEHEEECCCCHHHHHHHHHHHHCCC SNSPDFFLTRHVFEKALPELEASVPAVMHCVLQLYLDAGQDLAASTVINSFFDFCTKKAS CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC RPHEALEVIKASPGKLAHLLPATLIAGSQIDSSFYLCETMRLCKDENIELKRWALFSIGK CHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCC LNLPEDIKKFGDALSALEYAAVQETDDQILSSVIKSAFPLLQRDKSQEPRAIAIIISALR CCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH KGDDYVLHAASEIFGFYTGELPTTLREAFFVDLLRVKPTHKGTLDNVDYGISHLLKNGNS CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCH EQAIQFLEALLLRHSGELTIEVFDSAISEIVSNKAFISKVLTRWFLRGDRVLCEAVHEIV HHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH WAHHGSGLLLEIDVTELNPSDSGHILFIARKAIGYLFMQPLSAASVLISLMRNATDDKVL HHCCCCCEEEEEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH KKLGELLLDPLLLNYTGKARDYIIKQSGSESGKVKETIDNALKDINTYLEELRSVGSLSA HHHHHHHHHHHHHCCCCCHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC LHPSEAQREAYNRHYSQLMAESWKAAEAKSVVLNLFPKSVLLYGKKLINYVYGSDGQSHR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH QEIPLQCLGSEMEYARMHIFDPFGMDYMLRVFRNEQLKT HCCCHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure SKREELLQSYENGNFLETVYACSSNDHNDRSSVVFDLVALNNEGLIDVVGAFQSLKNES CHHHHHHHHHCCCCHHHHHEECCCCCCCCHHHHHEEHEEECCCCHHHHHHHHHHHHCCC SNSPDFFLTRHVFEKALPELEASVPAVMHCVLQLYLDAGQDLAASTVINSFFDFCTKKAS CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC RPHEALEVIKASPGKLAHLLPATLIAGSQIDSSFYLCETMRLCKDENIELKRWALFSIGK CHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCC LNLPEDIKKFGDALSALEYAAVQETDDQILSSVIKSAFPLLQRDKSQEPRAIAIIISALR CCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH KGDDYVLHAASEIFGFYTGELPTTLREAFFVDLLRVKPTHKGTLDNVDYGISHLLKNGNS CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCH EQAIQFLEALLLRHSGELTIEVFDSAISEIVSNKAFISKVLTRWFLRGDRVLCEAVHEIV HHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH WAHHGSGLLLEIDVTELNPSDSGHILFIARKAIGYLFMQPLSAASVLISLMRNATDDKVL HHCCCCCEEEEEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH KKLGELLLDPLLLNYTGKARDYIIKQSGSESGKVKETIDNALKDINTYLEELRSVGSLSA HHHHHHHHHHHHHCCCCCHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC LHPSEAQREAYNRHYSQLMAESWKAAEAKSVVLNLFPKSVLLYGKKLINYVYGSDGQSHR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH QEIPLQCLGSEMEYARMHIFDPFGMDYMLRVFRNEQLKT HCCCHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA