| Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
|---|---|
| Accession | NC_007514 |
| Length | 2,572,079 |
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The map label for this gene is 78188566
Identifier: 78188566
GI number: 78188566
Start: 690066
End: 691259
Strand: Reverse
Name: 78188566
Synonym: Cag_0588
Alternate gene names: NA
Gene position: 691259-690066 (Counterclockwise)
Preceding gene: 78188567
Following gene: 78188565
Centisome position: 26.88
GC content: 36.93
Gene sequence:
>1194_bases ATGATTCATAGCATTCGACTTGATAACCTACTTTCATTTGCATCGGGTAATCCAACATTACCATTGCAAAAGCTCAATGT ATTTATTGGTACCAATGGAGCAGGAAAATCAAATCTTATAGAAGCTCTTGATCTTGTAAGAGCTACACCTCGTTCACCCT CCAATAACGATTTTCAACGCGTTATTAGTCGAGGTGGAACTATTATGGAGTGGATATGGAAAGGCTCTCCCGATACTCCA GCCACAATAGAATTGATTATGGATAATCCATACAATAGCCATACTAACGAGAAACAACCAATTCGCCATCTATTTTCTTT TAAAGGAGAACAGCAACGAGTTATTTTTGTTGATGAAATTATAGAGAATGAATCACCCTATCACAGTAATAATGAGCCAT ATTTCTATTACCGTAGCTATAATGGAAAACCAGTTATTAACTCAGCAATTGCAGGAGAACGAAAATTGCAACGAGATAGT ATCAATGAAGAATTATCAATTCTTGCACAACGACGCGATCCTGAGCAATATCCTGAAATAACAAAATTGGCGGAAATATA TGAGGAATTCCGCCTTTATCGGGAATGGACTTTTGGACGAAATACAATATTTCGTAATCCACAACGATCAGATTTACGCA ATGATCGTCTTGAGGAAGATTTTTCAAATAAAGGACTTTTTCTTAATCGCTTAAAAACTCATAAGCCTAAAGCAAAAACT GCTATTCTTGAGGGGTTAAAAGACTTATATCAAGGCATTGATGATTTTAATATCAGCATAGAAGGAGGCACTGTACAAGT ATTCTTTACAGAAGGAGAATTTTCAATTCCTGCAACACGTTTATCAGATGGCACGCTTCGTTATTTGTGTTTATTAGCGC TTTTGTGCGATCCGGAACCACCTCCGTTGCTATGCATTGAAGAACCGGAATTAGGACTACATCCTGATATTATCCCAAAA CTTGCCGATTTACTTATTGATGCTTCACAACGCACACAAATTATAGTAACAACCCATTCAGATATTTTAATTGATGCATT AACTGAAATACCGGAAAGTGTTGTCGTTTGTGAAAAAAATGAGGGTAAAACAACCATGCAACGCCTTAATAGTAATGATC TTGCTGAATGGCTGAAACATTATCGTTTAGGACAACTTTGGACACGAGGCGATATAGGAGGAACTCGATGGTAA
Upstream 100 bases:
>100_bases CGACATTTCATCGAAGCCTCCAGCAACGATTGAGTGGGAATAGGATGATGGTTGGAAAATATTGGAGGGTAAACGAATAT CTATAAAATGCAATAAGACA
Downstream 100 bases:
>100_bases AATCAATAATTTACTTGGAAGGTGGAGGCGACTCAAAAGAGCTGCGGAGTAGATGTCGTGAGGGTTTTCGTAAACTACTT GAACGTAATGGGTTTAAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MIHSIRLDNLLSFASGNPTLPLQKLNVFIGTNGAGKSNLIEALDLVRATPRSPSNNDFQRVISRGGTIMEWIWKGSPDTP ATIELIMDNPYNSHTNEKQPIRHLFSFKGEQQRVIFVDEIIENESPYHSNNEPYFYYRSYNGKPVINSAIAGERKLQRDS INEELSILAQRRDPEQYPEITKLAEIYEEFRLYREWTFGRNTIFRNPQRSDLRNDRLEEDFSNKGLFLNRLKTHKPKAKT AILEGLKDLYQGIDDFNISIEGGTVQVFFTEGEFSIPATRLSDGTLRYLCLLALLCDPEPPPLLCIEEPELGLHPDIIPK LADLLIDASQRTQIIVTTHSDILIDALTEIPESVVVCEKNEGKTTMQRLNSNDLAEWLKHYRLGQLWTRGDIGGTRW
Sequences:
>Translated_397_residues MIHSIRLDNLLSFASGNPTLPLQKLNVFIGTNGAGKSNLIEALDLVRATPRSPSNNDFQRVISRGGTIMEWIWKGSPDTP ATIELIMDNPYNSHTNEKQPIRHLFSFKGEQQRVIFVDEIIENESPYHSNNEPYFYYRSYNGKPVINSAIAGERKLQRDS INEELSILAQRRDPEQYPEITKLAEIYEEFRLYREWTFGRNTIFRNPQRSDLRNDRLEEDFSNKGLFLNRLKTHKPKAKT AILEGLKDLYQGIDDFNISIEGGTVQVFFTEGEFSIPATRLSDGTLRYLCLLALLCDPEPPPLLCIEEPELGLHPDIIPK LADLLIDASQRTQIIVTTHSDILIDALTEIPESVVVCEKNEGKTTMQRLNSNDLAEWLKHYRLGQLWTRGDIGGTRW >Mature_397_residues MIHSIRLDNLLSFASGNPTLPLQKLNVFIGTNGAGKSNLIEALDLVRATPRSPSNNDFQRVISRGGTIMEWIWKGSPDTP ATIELIMDNPYNSHTNEKQPIRHLFSFKGEQQRVIFVDEIIENESPYHSNNEPYFYYRSYNGKPVINSAIAGERKLQRDS INEELSILAQRRDPEQYPEITKLAEIYEEFRLYREWTFGRNTIFRNPQRSDLRNDRLEEDFSNKGLFLNRLKTHKPKAKT AILEGLKDLYQGIDDFNISIEGGTVQVFFTEGEFSIPATRLSDGTLRYLCLLALLCDPEPPPLLCIEEPELGLHPDIIPK LADLLIDASQRTQIIVTTHSDILIDALTEIPESVVVCEKNEGKTTMQRLNSNDLAEWLKHYRLGQLWTRGDIGGTRW
Specific function: Unknown
COG id: COG4637
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45444; Mature: 45444
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHSIRLDNLLSFASGNPTLPLQKLNVFIGTNGAGKSNLIEALDLVRATPRSPSNNDFQR CCCEECHHHHHHHCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHH VISRGGTIMEWIWKGSPDTPATIELIMDNPYNSHTNEKQPIRHLFSFKGEQQRVIFVDEI HHHCCCCEEEHEECCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEHHHH IENESPYHSNNEPYFYYRSYNGKPVINSAIAGERKLQRDSINEELSILAQRRDPEQYPEI HCCCCCCCCCCCCEEEEECCCCCCCCHHHHHCHHHHHHHCCHHHHHHHHHCCCCHHCHHH TKLAEIYEEFRLYREWTFGRNTIFRNPQRSDLRNDRLEEDFSNKGLFLNRLKTHKPKAKT HHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHCCCCEEEHHHHCCCCHHHH AILEGLKDLYQGIDDFNISIEGGTVQVFFTEGEFSIPATRLSDGTLRYLCLLALLCDPEP HHHHHHHHHHCCCCCCEEEEECCEEEEEEECCCCCCCHHHCCCCHHHHHHHHHHHCCCCC PPLLCIEEPELGLHPDIIPKLADLLIDASQRTQIIVTTHSDILIDALTEIPESVVVCEKN CCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCCEEEEECC EGKTTMQRLNSNDLAEWLKHYRLGQLWTRGDIGGTRW CCHHHHHHCCCHHHHHHHHHHHHHCEEECCCCCCCCC >Mature Secondary Structure MIHSIRLDNLLSFASGNPTLPLQKLNVFIGTNGAGKSNLIEALDLVRATPRSPSNNDFQR CCCEECHHHHHHHCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHH VISRGGTIMEWIWKGSPDTPATIELIMDNPYNSHTNEKQPIRHLFSFKGEQQRVIFVDEI HHHCCCCEEEHEECCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEEHHHH IENESPYHSNNEPYFYYRSYNGKPVINSAIAGERKLQRDSINEELSILAQRRDPEQYPEI HCCCCCCCCCCCCEEEEECCCCCCCCHHHHHCHHHHHHHCCHHHHHHHHHCCCCHHCHHH TKLAEIYEEFRLYREWTFGRNTIFRNPQRSDLRNDRLEEDFSNKGLFLNRLKTHKPKAKT HHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHCCCCEEEHHHHCCCCHHHH AILEGLKDLYQGIDDFNISIEGGTVQVFFTEGEFSIPATRLSDGTLRYLCLLALLCDPEP HHHHHHHHHHCCCCCCEEEEECCEEEEEEECCCCCCCHHHCCCCHHHHHHHHHHHCCCCC PPLLCIEEPELGLHPDIIPKLADLLIDASQRTQIIVTTHSDILIDALTEIPESVVVCEKN CCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCCEEEEECC EGKTTMQRLNSNDLAEWLKHYRLGQLWTRGDIGGTRW CCHHHHHHCCCHHHHHHHHHHHHHCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA