Click here to switch to the map view.

The map label for this gene is 78188159

Identifier: 78188159

GI number: 78188159

Start: 196403

End: 198628

Strand: Reverse

Name: 78188159

Synonym: Cag_0176

Alternate gene names: NA

Gene position: 198628-196403 (Counterclockwise)

Preceding gene: 78188160

Following gene: 78188158

Centisome position: 7.72

GC content: 45.46

Gene sequence:

>2226_bases
GTGAAAAAAGTATGGCGCACTATAGCCCTGTTTCTCTTTTGTGCCTCTCCGTTACATGGTGAAGAGGTGGCAACGGTGCC
CACTCCACCATCTATCCAAAAAGCAACGCAACCCCATCCCTACGTTAATACCATTCGCATTAGCGGCAATAAAGCTATTT
CCGAAGAGGAGTTACGGTTGATTATTAGCACACGAGCACATAAATCGTTTTTTGGGAGTGGCTTATTTGGAGGTGCTAAA
AAAGCTTTTAATGCCGAAGAGTTTGAACGTGATATTTTCCTTATTAAAAAACTCTACACCTATAAAGGCTACTTTGCGGC
TGAAGTTGATACCACCATTACACGCCTCTCAAAAGGCAAAAAGGTAAATCTTGCCATTCGCATTAAAGAGCATCAACCCG
CCCGTATTGATACGTTACGCTATTTTGGATTAGAAAAAGTGCCCGAACGACTTGAAAAAAAGTTCTTAGCAGAAAGCCGT
TTGCAGGTTGGCAAAATTTTTTCGGTAGAGCAATTAATTGAAGAGCGCGATCGCTCACTCAATTTTTTTAGGGAGCAAGG
TTATACTTTTTTTCATGAGGATAGTATTCGCGTGAAGGTGGATACTGTTGGCACCCATGCAGGCATTGCAATGAACTTCC
ATTTGCCTGAACGGTTGCAATACGCGCCAATTCATGCAGTTGTGCAAAATTCGCGCCGCAACGAAAAAAAGCCTCGTGAG
CAAACGTTTCAGCTTGAGGGCATTCATGGCAAAGTAATTGGACGGCAACGCATTAACCCTGAACTTATTACAACGGCGGT
AGCTTTTCGCCAGGGGCAATACACCAGCCAAAGCAAAGAGCAACGCACCTTGCAAAATCTTGGAGCCACCAACGTCTTTT
CGTCGCTCTCCATTACCCCCGACTCGGTACGCTCAGGATTGCTTTACACCACCATTAGCTTAGAAGCAGCTCCAAAGCAT
GAACTTGCCCCCAAAATATTAGTGGATAACCGTTATGGTCCCCTCTTTTTTGGTGGCTCAATGGCATACGAAAACAAAAA
TTTGCTGGGGCGTGGCGAGCAATTACGTTTAAGTGCTAACTACGGCACTCAAATTGAGAAAAAAAGTAGTCTGCTCTCAA
ACCTTGCCCCCTCAGAATATGATGCCTTTAACCCTTACGACTTTAGCGTTAAAAGCACCTTAGTTCGCCCTGTTTCAAAG
CAAAATGGCAATTACTACTCTACCACTATTGAGTACGCTACCACCAAACAACCGGTACTCCTTTCAAACCGTAACGCTTT
AATTCGGGCAACTTACAACGCCAAGCTTGGAAGCACCTCCCGCTTAAACTTCGACTTTTTTGATGTTGAATGGGTGCAAA
AAGATTCTTTACGAGGCTTTAAACCATTGTTTCAAAAAGAGCTTGCCACCAACATTGGCATTGATCCCACCAACGATGCC
GCCATTAACGCTGGTATTGATAGCTTAGTAAGCACACACTTTAACCAAACGTTCCGCTTGCGCTACCAATCCAAAAGCAA
ACCGCGAAGCGAAACGCAAATTGGTAGAACCCTTTGGAACACCGATTTACTGTTGGAGGAATCAGGTAGCCTTGCATGGC
TTGTTGACCGTTACTTAGATACCAGTCGCCGTAACGGCTTTACCAGCAACGATCCGCAAATTTTTGGCACCGCCTATTCA
CAATATCTCAAACTTGAAAGCGGCGTAAGCTTTGTGAACCTGAGCACCACCAATAGCCAATTTGCCGGCAGAATACGCGC
AGGATGGATGGCTCCGTATGGCAAAGCAACCGCAACGCCTGAAGAGCGGCGATTTTATGCAGGTGGCGCTAACGATTTAC
GTGGATGGATTTTTGGCACGCTGGGACCGGGTAAAAACCGCAGCGAAGCCACAGCAAACTTTGGTGCCAATATTAAGCTT
ACCACATCTCTTGAATATCGGCTTAAGTTCTTTCGCTTTTTAAACCAGCCATCAGGCATTACCTTTTTTACCGATGCTGG
CAACATTTGGGATAATGATGGCACGTATGGCTTCAACAGCAAGAGCCTTTTTCGCGATATGGCTTGGGATGCTGGGGCTG
GCTTACGGCTTGGCTCTCCTATTGGTCCACTACGTTTTGATATAGCCTATAGGCTGCATGACCCCACTCAAGCGCACCCT
TGGCAGCTCAAACATCTTAATGGAAGCGACTACACCTTTACGTTTGGTATTGGTGAAGCTTTTTAA

Upstream 100 bases:

>100_bases
AGAAGTGCTGAGTGGCTGAGAGCGCTCCATTTGTCATGAGAGCGCTCTTACACTATTAACCCCTCACCGCAACCACCAAC
CAACAAGAGGAGCTTTGGCT

Downstream 100 bases:

>100_bases
TTATTTCGCCACAACGGTTTTACCATTCACCCTTACAAAAAAAAGACTATGCCAACAATTCTTGCCCCATCGGTATTATC
AGCCGATTTTACCCGCCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Protein; Lipoprotein; OMP85 Family Outer Membrane Protein; Surface Membrane Protein; Surface Antigen Protein; OmpIP Family Outer Membrane Porin; Cell Surface Protein; LOW QUALITY PROTEIN Outer Membrane Protein

Number of amino acids: Translated: 741; Mature: 741

Protein sequence:

>741_residues
MKKVWRTIALFLFCASPLHGEEVATVPTPPSIQKATQPHPYVNTIRISGNKAISEEELRLIISTRAHKSFFGSGLFGGAK
KAFNAEEFERDIFLIKKLYTYKGYFAAEVDTTITRLSKGKKVNLAIRIKEHQPARIDTLRYFGLEKVPERLEKKFLAESR
LQVGKIFSVEQLIEERDRSLNFFREQGYTFFHEDSIRVKVDTVGTHAGIAMNFHLPERLQYAPIHAVVQNSRRNEKKPRE
QTFQLEGIHGKVIGRQRINPELITTAVAFRQGQYTSQSKEQRTLQNLGATNVFSSLSITPDSVRSGLLYTTISLEAAPKH
ELAPKILVDNRYGPLFFGGSMAYENKNLLGRGEQLRLSANYGTQIEKKSSLLSNLAPSEYDAFNPYDFSVKSTLVRPVSK
QNGNYYSTTIEYATTKQPVLLSNRNALIRATYNAKLGSTSRLNFDFFDVEWVQKDSLRGFKPLFQKELATNIGIDPTNDA
AINAGIDSLVSTHFNQTFRLRYQSKSKPRSETQIGRTLWNTDLLLEESGSLAWLVDRYLDTSRRNGFTSNDPQIFGTAYS
QYLKLESGVSFVNLSTTNSQFAGRIRAGWMAPYGKATATPEERRFYAGGANDLRGWIFGTLGPGKNRSEATANFGANIKL
TTSLEYRLKFFRFLNQPSGITFFTDAGNIWDNDGTYGFNSKSLFRDMAWDAGAGLRLGSPIGPLRFDIAYRLHDPTQAHP
WQLKHLNGSDYTFTFGIGEAF

Sequences:

>Translated_741_residues
MKKVWRTIALFLFCASPLHGEEVATVPTPPSIQKATQPHPYVNTIRISGNKAISEEELRLIISTRAHKSFFGSGLFGGAK
KAFNAEEFERDIFLIKKLYTYKGYFAAEVDTTITRLSKGKKVNLAIRIKEHQPARIDTLRYFGLEKVPERLEKKFLAESR
LQVGKIFSVEQLIEERDRSLNFFREQGYTFFHEDSIRVKVDTVGTHAGIAMNFHLPERLQYAPIHAVVQNSRRNEKKPRE
QTFQLEGIHGKVIGRQRINPELITTAVAFRQGQYTSQSKEQRTLQNLGATNVFSSLSITPDSVRSGLLYTTISLEAAPKH
ELAPKILVDNRYGPLFFGGSMAYENKNLLGRGEQLRLSANYGTQIEKKSSLLSNLAPSEYDAFNPYDFSVKSTLVRPVSK
QNGNYYSTTIEYATTKQPVLLSNRNALIRATYNAKLGSTSRLNFDFFDVEWVQKDSLRGFKPLFQKELATNIGIDPTNDA
AINAGIDSLVSTHFNQTFRLRYQSKSKPRSETQIGRTLWNTDLLLEESGSLAWLVDRYLDTSRRNGFTSNDPQIFGTAYS
QYLKLESGVSFVNLSTTNSQFAGRIRAGWMAPYGKATATPEERRFYAGGANDLRGWIFGTLGPGKNRSEATANFGANIKL
TTSLEYRLKFFRFLNQPSGITFFTDAGNIWDNDGTYGFNSKSLFRDMAWDAGAGLRLGSPIGPLRFDIAYRLHDPTQAHP
WQLKHLNGSDYTFTFGIGEAF
>Mature_741_residues
MKKVWRTIALFLFCASPLHGEEVATVPTPPSIQKATQPHPYVNTIRISGNKAISEEELRLIISTRAHKSFFGSGLFGGAK
KAFNAEEFERDIFLIKKLYTYKGYFAAEVDTTITRLSKGKKVNLAIRIKEHQPARIDTLRYFGLEKVPERLEKKFLAESR
LQVGKIFSVEQLIEERDRSLNFFREQGYTFFHEDSIRVKVDTVGTHAGIAMNFHLPERLQYAPIHAVVQNSRRNEKKPRE
QTFQLEGIHGKVIGRQRINPELITTAVAFRQGQYTSQSKEQRTLQNLGATNVFSSLSITPDSVRSGLLYTTISLEAAPKH
ELAPKILVDNRYGPLFFGGSMAYENKNLLGRGEQLRLSANYGTQIEKKSSLLSNLAPSEYDAFNPYDFSVKSTLVRPVSK
QNGNYYSTTIEYATTKQPVLLSNRNALIRATYNAKLGSTSRLNFDFFDVEWVQKDSLRGFKPLFQKELATNIGIDPTNDA
AINAGIDSLVSTHFNQTFRLRYQSKSKPRSETQIGRTLWNTDLLLEESGSLAWLVDRYLDTSRRNGFTSNDPQIFGTAYS
QYLKLESGVSFVNLSTTNSQFAGRIRAGWMAPYGKATATPEERRFYAGGANDLRGWIFGTLGPGKNRSEATANFGANIKL
TTSLEYRLKFFRFLNQPSGITFFTDAGNIWDNDGTYGFNSKSLFRDMAWDAGAGLRLGSPIGPLRFDIAYRLHDPTQAHP
WQLKHLNGSDYTFTFGIGEAF

Specific function: Unknown

COG id: COG0729

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 83610; Mature: 83610

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVWRTIALFLFCASPLHGEEVATVPTPPSIQKATQPHPYVNTIRISGNKAISEEELRL
CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHEEE
IISTRAHKSFFGSGLFGGAKKAFNAEEFERDIFLIKKLYTYKGYFAAEVDTTITRLSKGK
EEEHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHCCCC
KVNLAIRIKEHQPARIDTLRYFGLEKVPERLEKKFLAESRLQVGKIFSVEQLIEERDRSL
EEEEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NFFREQGYTFFHEDSIRVKVDTVGTHAGIAMNFHLPERLQYAPIHAVVQNSRRNEKKPRE
HHHHHCCCEEEECCCEEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCCHH
QTFQLEGIHGKVIGRQRINPELITTAVAFRQGQYTSQSKEQRTLQNLGATNVFSSLSITP
HCEEEECCCEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHCCCCCH
DSVRSGLLYTTISLEAAPKHELAPKILVDNRYGPLFFGGSMAYENKNLLGRGEQLRLSAN
HHHHCCEEEEEEEECCCCCCCCCCEEEEECCCCCEEECCEEEECCCCCCCCCCEEEEECC
YGTQIEKKSSLLSNLAPSEYDAFNPYDFSVKSTLVRPVSKQNGNYYSTTIEYATTKQPVL
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCHHHCCCCEEEEEEEEECCCCCEE
LSNRNALIRATYNAKLGSTSRLNFDFFDVEWVQKDSLRGFKPLFQKELATNIGIDPTNDA
EECCCEEEEEEECCCCCCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCC
AINAGIDSLVSTHFNQTFRLRYQSKSKPRSETQIGRTLWNTDLLLEESGSLAWLVDRYLD
EECCCHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHCCEEEEECCCCEEEEHHHHHH
TSRRNGFTSNDPQIFGTAYSQYLKLESGVSFVNLSTTNSQFAGRIRAGWMAPYGKATATP
HHHCCCCCCCCCEEEEHHHHHHHHHHCCCEEEEEECCCHHHCCEEEECCCCCCCCCCCCH
EERRFYAGGANDLRGWIFGTLGPGKNRSEATANFGANIKLTTSLEYRLKFFRFLNQPSGI
HHCEEECCCCCCCCEEEEEECCCCCCCCCCHHCCCCCEEEEECHHHHHHHHHHHCCCCCE
TFFTDAGNIWDNDGTYGFNSKSLFRDMAWDAGAGLRLGSPIGPLRFDIAYRLHDPTQAHP
EEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCC
WQLKHLNGSDYTFTFGIGEAF
EEEEECCCCCEEEEEECCCCC
>Mature Secondary Structure
MKKVWRTIALFLFCASPLHGEEVATVPTPPSIQKATQPHPYVNTIRISGNKAISEEELRL
CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHEEE
IISTRAHKSFFGSGLFGGAKKAFNAEEFERDIFLIKKLYTYKGYFAAEVDTTITRLSKGK
EEEHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHCCCC
KVNLAIRIKEHQPARIDTLRYFGLEKVPERLEKKFLAESRLQVGKIFSVEQLIEERDRSL
EEEEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NFFREQGYTFFHEDSIRVKVDTVGTHAGIAMNFHLPERLQYAPIHAVVQNSRRNEKKPRE
HHHHHCCCEEEECCCEEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCCHH
QTFQLEGIHGKVIGRQRINPELITTAVAFRQGQYTSQSKEQRTLQNLGATNVFSSLSITP
HCEEEECCCEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHCCCCCH
DSVRSGLLYTTISLEAAPKHELAPKILVDNRYGPLFFGGSMAYENKNLLGRGEQLRLSAN
HHHHCCEEEEEEEECCCCCCCCCCEEEEECCCCCEEECCEEEECCCCCCCCCCEEEEECC
YGTQIEKKSSLLSNLAPSEYDAFNPYDFSVKSTLVRPVSKQNGNYYSTTIEYATTKQPVL
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCHHHCCCCEEEEEEEEECCCCCEE
LSNRNALIRATYNAKLGSTSRLNFDFFDVEWVQKDSLRGFKPLFQKELATNIGIDPTNDA
EECCCEEEEEEECCCCCCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCC
AINAGIDSLVSTHFNQTFRLRYQSKSKPRSETQIGRTLWNTDLLLEESGSLAWLVDRYLD
EECCCHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHCCEEEEECCCCEEEEHHHHHH
TSRRNGFTSNDPQIFGTAYSQYLKLESGVSFVNLSTTNSQFAGRIRAGWMAPYGKATATP
HHHCCCCCCCCCEEEEHHHHHHHHHHCCCEEEEEECCCHHHCCEEEECCCCCCCCCCCCH
EERRFYAGGANDLRGWIFGTLGPGKNRSEATANFGANIKLTTSLEYRLKFFRFLNQPSGI
HHCEEECCCCCCCCEEEEEECCCCCCCCCCHHCCCCCEEEEECHHHHHHHHHHHCCCCCE
TFFTDAGNIWDNDGTYGFNSKSLFRDMAWDAGAGLRLGSPIGPLRFDIAYRLHDPTQAHP
EEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCC
WQLKHLNGSDYTFTFGIGEAF
EEEEECCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA