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The map label for this gene is elbB [H]

Identifier: 78188150

GI number: 78188150

Start: 188169

End: 188846

Strand: Reverse

Name: elbB [H]

Synonym: Cag_0167

Alternate gene names: 78188150

Gene position: 188846-188169 (Counterclockwise)

Preceding gene: 78188152

Following gene: 162319775

Centisome position: 7.34

GC content: 49.71

Gene sequence:

>678_bases
ATGACCACGCAACTTTCCCCACGCATTGGTGTCCTGCTTGCTGGATGCGGCTACCTTGATGGCTCCGAAATTCACGAAGC
TGTGCTCACACTCTTAGCAATTTCAAAAAAAGGTGCCCAAGCCATCTGCCTTGCGCCTGATATGGTACAACATCATGTGG
TTAACCACCTAACAGGGCAGGAAGTTATTGGAGAATCGCGCAACGTTCTTGTAGAAGCGGCTCGCATTGCTCGTGGCGCC
ATCCACAACCTTAGCGACATTGCATCGCTTCACCTTGATGCTTTCATTGTGCCCGGTGGCTACGGAGCGGCAAAAAATCT
TAGCTCTTTTGCTTTTGATGGCACACCGTGCACTATCCATCCCGACGTGGCTACCGCCATTCAGCTCTTCTACAAGGCAG
GCAAACCCATGGGATTTATTTGCATTTCGCCCGTTCTTGCCGCTAAAGTGCTTGGCAGCGAAAAAATTGAAGTAACCATT
GGCAACGATGCCTCCACCGCCGCAAGCATTGAGGCTATGGGTGCTCGCCACATTAATTGCGTTGTTACCAAAGCGCACGT
CAGCAAACCACACAACATTGTAAGCACCCCCGCTTACATGCTGGAGGCTTCACTTGCCGATATTGCTACAGGTATTGAAC
AACTTGTTGGCAATGTAGTTGAATTGGTAAAAAAGTGA

Upstream 100 bases:

>100_bases
ATAATTTCATCACTATGTTTAACAGCGCATCAAACAAAATTGTCCACACGCTTTTTTTAAAAAGAGCGTAAAAGATACAT
AAACGTAATAATTTACCACT

Downstream 100 bases:

>100_bases
GCATGTTTGCTTGTTCTATATTGCCATACTATCGCAAAGAAGAAATGGGCACCCACTACTCTTCTTTGCGACGGGGTAAA
ATAGTTTTTAAATAATCATC

Product: isoprenoid biosynthesis protein with amidotransferase-like domain

Products: NA

Alternate protein names: Sigma cross-reacting protein 27A; SCRP-27A [H]

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MTTQLSPRIGVLLAGCGYLDGSEIHEAVLTLLAISKKGAQAICLAPDMVQHHVVNHLTGQEVIGESRNVLVEAARIARGA
IHNLSDIASLHLDAFIVPGGYGAAKNLSSFAFDGTPCTIHPDVATAIQLFYKAGKPMGFICISPVLAAKVLGSEKIEVTI
GNDASTAASIEAMGARHINCVVTKAHVSKPHNIVSTPAYMLEASLADIATGIEQLVGNVVELVKK

Sequences:

>Translated_225_residues
MTTQLSPRIGVLLAGCGYLDGSEIHEAVLTLLAISKKGAQAICLAPDMVQHHVVNHLTGQEVIGESRNVLVEAARIARGA
IHNLSDIASLHLDAFIVPGGYGAAKNLSSFAFDGTPCTIHPDVATAIQLFYKAGKPMGFICISPVLAAKVLGSEKIEVTI
GNDASTAASIEAMGARHINCVVTKAHVSKPHNIVSTPAYMLEASLADIATGIEQLVGNVVELVKK
>Mature_224_residues
TTQLSPRIGVLLAGCGYLDGSEIHEAVLTLLAISKKGAQAICLAPDMVQHHVVNHLTGQEVIGESRNVLVEAARIARGAI
HNLSDIASLHLDAFIVPGGYGAAKNLSSFAFDGTPCTIHPDVATAIQLFYKAGKPMGFICISPVLAAKVLGSEKIEVTIG
NDASTAASIEAMGARHINCVVTKAHVSKPHNIVSTPAYMLEASLADIATGIEQLVGNVVELVKK

Specific function: May be involved in the early steps of isoprenoid biosynthesis [H]

COG id: COG3155

COG function: function code Q; Uncharacterized protein involved in an early stage of isoprenoid biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ES1 family [H]

Homologues:

Organism=Homo sapiens, GI296531406, Length=227, Percent_Identity=47.136563876652, Blast_Score=205, Evalue=2e-53,
Organism=Homo sapiens, GI296531408, Length=227, Percent_Identity=41.4096916299559, Blast_Score=157, Evalue=6e-39,
Organism=Escherichia coli, GI87082228, Length=217, Percent_Identity=52.5345622119816, Blast_Score=226, Evalue=1e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 23495; Mature: 23363

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTQLSPRIGVLLAGCGYLDGSEIHEAVLTLLAISKKGAQAICLAPDMVQHHVVNHLTGQ
CCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHCCHH
EVIGESRNVLVEAARIARGAIHNLSDIASLHLDAFIVPGGYGAAKNLSSFAFDGTPCTIH
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHCCHHHEECCCCCEEC
PDVATAIQLFYKAGKPMGFICISPVLAAKVLGSEKIEVTIGNDASTAASIEAMGARHINC
CCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCEEEE
VVTKAHVSKPHNIVSTPAYMLEASLADIATGIEQLVGNVVELVKK
EEEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTQLSPRIGVLLAGCGYLDGSEIHEAVLTLLAISKKGAQAICLAPDMVQHHVVNHLTGQ
CCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHCCHH
EVIGESRNVLVEAARIARGAIHNLSDIASLHLDAFIVPGGYGAAKNLSSFAFDGTPCTIH
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHCCHHHEECCCCCEEC
PDVATAIQLFYKAGKPMGFICISPVLAAKVLGSEKIEVTIGNDASTAASIEAMGARHINC
CCHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCEEEE
VVTKAHVSKPHNIVSTPAYMLEASLADIATGIEQLVGNVVELVKK
EEEEHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 1575737; 9603997 [H]