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The map label for this gene is yebC [C]

Identifier: 162319775

GI number: 162319775

Start: 185792

End: 186544

Strand: Reverse

Name: yebC [C]

Synonym: Cag_0165

Alternate gene names: 162319775

Gene position: 186544-185792 (Counterclockwise)

Preceding gene: 78188150

Following gene: 78188147

Centisome position: 7.25

GC content: 44.75

Gene sequence:

>753_bases
ATGTCAGGACACAGCAAGTGGGCAACAATAAAGCGCAAAAAAGCTGCCACCGATCAAAAAAGGGGTAATCTTTTCACAAA
GTTAGTAAAGGAAATCACTATTGCCGCTAAAATGGGCGGTGGCGATCCTACAGGTAACCCTCGTTTGCGTCTTGCTATTG
ATACCGCTCGTAGCAATTCCATGCCTATGGATAACATTCAGCGTGCTATTAAAAAAGGTACGGGCGAGTTGGATGGGGTA
AGCTGGGATGAAATTACTTACGAAGGCTATGGCCCTGCTGGTATTGCGTTAATTATTGAAACGGCTACCGATAATCGTAA
TCGCACCGTTGCTGATTTACGCCATATTATGAGCCGCAATAATGGTTCGCTGGGCGAAAGCGGCAGTGTGGCGTGGATGT
TCCAACGTAAGGGGTCGCTTGATGTGCCTCATTCCGCTGTAAGCGAGGAGCAGCTTATGGAGTTGTTGCTTGATGCTGGG
CTTGAGGATTTAGATCAGGATGATGAGAATTATTTTACGGTTATTACCGATATAAAAGATCTTGAGTCAGCAAAAAAGGC
GTTGGATGAGGCTGGAATTGCTTATGAAAATGCTAAGATTGACTTAATCCCCGATAACTACATTGAGCTTGATGCCGATG
ATGCCGCTAAAGTGATGAAGCTGATTGATGCGCTTGAAAGTAATGACGATGTACAAGCTGTTTATAGCAACATGGAGCTA
AGTGAAAGCGCCATGAATAGCTTGAGCGAGTAA

Upstream 100 bases:

>100_bases
CTTGCTGGGTAAGGCAAATGCCCTAACCTAAAGCTTTTGCAATAGCGCACTTTTGGTATTTTTTATGAGCACATCTTCAT
TAATCACCATTTTCTACATT

Downstream 100 bases:

>100_bases
GTTTCTTTATGATTGTGCTTGGGGTTGATCCCGGTAGTTTAAAAACAGGTTATGGTGTGGTGCAGCACCATAACGGCTCT
TTTTCGGTTTTGGCGGCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MSGHSKWATIKRKKAATDQKRGNLFTKLVKEITIAAKMGGGDPTGNPRLRLAIDTARSNSMPMDNIQRAIKKGTGELDGV
SWDEITYEGYGPAGIALIIETATDNRNRTVADLRHIMSRNNGSLGESGSVAWMFQRKGSLDVPHSAVSEEQLMELLLDAG
LEDLDQDDENYFTVITDIKDLESAKKALDEAGIAYENAKIDLIPDNYIELDADDAAKVMKLIDALESNDDVQAVYSNMEL
SESAMNSLSE

Sequences:

>Translated_250_residues
MSGHSKWATIKRKKAATDQKRGNLFTKLVKEITIAAKMGGGDPTGNPRLRLAIDTARSNSMPMDNIQRAIKKGTGELDGV
SWDEITYEGYGPAGIALIIETATDNRNRTVADLRHIMSRNNGSLGESGSVAWMFQRKGSLDVPHSAVSEEQLMELLLDAG
LEDLDQDDENYFTVITDIKDLESAKKALDEAGIAYENAKIDLIPDNYIELDADDAAKVMKLIDALESNDDVQAVYSNMEL
SESAMNSLSE
>Mature_249_residues
SGHSKWATIKRKKAATDQKRGNLFTKLVKEITIAAKMGGGDPTGNPRLRLAIDTARSNSMPMDNIQRAIKKGTGELDGVS
WDEITYEGYGPAGIALIIETATDNRNRTVADLRHIMSRNNGSLGESGSVAWMFQRKGSLDVPHSAVSEEQLMELLLDAGL
EDLDQDDENYFTVITDIKDLESAKKALDEAGIAYENAKIDLIPDNYIELDADDAAKVMKLIDALESNDDVQAVYSNMELS
ESAMNSLSE

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=247, Percent_Identity=31.1740890688259, Blast_Score=137, Evalue=7e-33,
Organism=Escherichia coli, GI1788171, Length=248, Percent_Identity=45.9677419354839, Blast_Score=231, Evalue=3e-62,
Organism=Escherichia coli, GI1788294, Length=235, Percent_Identity=35.3191489361702, Blast_Score=135, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI17556100, Length=244, Percent_Identity=25.8196721311475, Blast_Score=83, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6321458, Length=263, Percent_Identity=30.4182509505703, Blast_Score=112, Evalue=7e-26,
Organism=Drosophila melanogaster, GI24583305, Length=249, Percent_Identity=25.7028112449799, Blast_Score=68, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y165_CHLCH (Q3AU82)

Other databases:

- EMBL:   CP000108
- RefSeq:   YP_378486.2
- ProteinModelPortal:   Q3AU82
- SMR:   Q3AU82
- STRING:   Q3AU82
- GeneID:   3747730
- GenomeReviews:   CP000108_GR
- KEGG:   cch:Cag_0165
- eggNOG:   COG0217
- HOGENOM:   HBG715231
- ProtClustDB:   PRK00110
- BioCyc:   CCHL340177:CAG_0165-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 27372; Mature: 27241

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGHSKWATIKRKKAATDQKRGNLFTKLVKEITIAAKMGGGDPTGNPRLRLAIDTARSNS
CCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCC
MPMDNIQRAIKKGTGELDGVSWDEITYEGYGPAGIALIIETATDNRNRTVADLRHIMSRN
CCHHHHHHHHHHCCCCCCCCCHHHEEECCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCC
NGSLGESGSVAWMFQRKGSLDVPHSAVSEEQLMELLLDAGLEDLDQDDENYFTVITDIKD
CCCCCCCCCEEEEEECCCCCCCCHHHCCHHHHHHHHHHCCCHHCCCCCCCEEEEEECHHH
LESAKKALDEAGIAYENAKIDLIPDNYIELDADDAAKVMKLIDALESNDDVQAVYSNMEL
HHHHHHHHHHCCCEECCCEEEECCCCCEEECCHHHHHHHHHHHHHCCCCCHHHHHHCCHH
SESAMNSLSE
HHHHHHHHCC
>Mature Secondary Structure 
SGHSKWATIKRKKAATDQKRGNLFTKLVKEITIAAKMGGGDPTGNPRLRLAIDTARSNS
CCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCC
MPMDNIQRAIKKGTGELDGVSWDEITYEGYGPAGIALIIETATDNRNRTVADLRHIMSRN
CCHHHHHHHHHHCCCCCCCCCHHHEEECCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCC
NGSLGESGSVAWMFQRKGSLDVPHSAVSEEQLMELLLDAGLEDLDQDDENYFTVITDIKD
CCCCCCCCCEEEEEECCCCCCCCHHHCCHHHHHHHHHHCCCHHCCCCCCCEEEEEECHHH
LESAKKALDEAGIAYENAKIDLIPDNYIELDADDAAKVMKLIDALESNDDVQAVYSNMEL
HHHHHHHHHHCCCEECCCEEEECCCCCEEECCHHHHHHHHHHHHHCCCCCHHHHHHCCHH
SESAMNSLSE
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA