| Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
|---|---|
| Accession | NC_007514 |
| Length | 2,572,079 |
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The map label for this gene is yceG [C]
Identifier: 78188029
GI number: 78188029
Start: 51249
End: 52259
Strand: Reverse
Name: yceG [C]
Synonym: Cag_0045
Alternate gene names: 78188029
Gene position: 52259-51249 (Counterclockwise)
Preceding gene: 78188030
Following gene: 78188028
Centisome position: 2.03
GC content: 49.55
Gene sequence:
>1011_bases ATGAAATCTCCTCGCTCTTTTATTACTCGCCTAATTCTTGCGGTTACTTTGCTGATAGCCGCATTCCCGCTTGGCTTTTT GTTGATACCGGGACTTAATAGTAAGAGCAAACCAACGCAATTAGTGGTGCATCGTGAAATGCGCTTTAGCGATGTGCTCG ACAAGTTGCAAGCAAGTGGCGCAATTCGTGAACGGTGGCAGCCAGAGCTAATTGCACGCATGGTACCAAAATTCCGCACG ATAAAAGCTGGACGCTACACCATTCCCCCCAACACCTCGAACTTTGGCTTACTGTGGTACCTCCGCACGCACCCGCTTGA CGAAGTGCGCGTTACCCTGCCCGAAGGTATTGATAGACGCAAAATGGCACGCATTCTTTCGCGCAAGCTTGATTTTGACT CCACGCAGTTTATGGCTGCAACCGAAAATCCTCGTTTACTTGCAAAATATGGCATTCGTGCCAGCCACGCCGAAGGCTAC TTGCTACCAGGAACCTATGATTTTGCATGGGGCAGCTCACCTGATGAAGCGGCAAGCTTTCTTATTCGTCAATTCAAAAA ATTGTACACCACCGAACGGCAGCAACGCGCCGCAGCGCTTGGCTTTAACGAGCATAGCCTCCTGACGCTTGCCTCCATTG TAGAAGCCGAAACGCCGCTTGATAAAGAAAAGCCCACGGTAGCCAGCGTTTACTTACATCGCTTACGCATTGGAATGCGC TTGCAAGCTGACCCTACCGTCCAGTACGCCCTTGGAGGCACCACACGCCGCTTGTACTACAAAGACCTTGCAATTGCCTC CCCCTACAACACCTACCGCAATAAAGGTTTACCCCCTGGACCTATCTGCAATCCGGGCAAAGCTTCAATTATAGCCGTCT TAAACGCCCCTCAAAGTGGCTATCTCTATTTTGTAGCAACAGGTACAGGCGGACATTACTTTGGCGCATCGCTACAAGAA CATCATGCAAATGTACAGAAGTATAAACAGGCACGTAGTAGTAACGAATAA
Upstream 100 bases:
>100_bases CGGCAATTTATCAAGCCATTATTGAGGAGTCGCGCAAATTCCAGCATGAATGGAAAAACAGTTCGCAACAGCTTGAGCGC TAAGGCGCCCCTCTCTTTTT
Downstream 100 bases:
>100_bases TTTCGCAACTCCATGAGTTGCCTTGTTCTCTGTGCTTATTATTCTTATACTTTCTGGTTATATACTCTTCACTGAGCCTC CCACTCGTTGCTATACGTTT
Product: aminodeoxychorismate lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MKSPRSFITRLILAVTLLIAAFPLGFLLIPGLNSKSKPTQLVVHREMRFSDVLDKLQASGAIRERWQPELIARMVPKFRT IKAGRYTIPPNTSNFGLLWYLRTHPLDEVRVTLPEGIDRRKMARILSRKLDFDSTQFMAATENPRLLAKYGIRASHAEGY LLPGTYDFAWGSSPDEAASFLIRQFKKLYTTERQQRAAALGFNEHSLLTLASIVEAETPLDKEKPTVASVYLHRLRIGMR LQADPTVQYALGGTTRRLYYKDLAIASPYNTYRNKGLPPGPICNPGKASIIAVLNAPQSGYLYFVATGTGGHYFGASLQE HHANVQKYKQARSSNE
Sequences:
>Translated_336_residues MKSPRSFITRLILAVTLLIAAFPLGFLLIPGLNSKSKPTQLVVHREMRFSDVLDKLQASGAIRERWQPELIARMVPKFRT IKAGRYTIPPNTSNFGLLWYLRTHPLDEVRVTLPEGIDRRKMARILSRKLDFDSTQFMAATENPRLLAKYGIRASHAEGY LLPGTYDFAWGSSPDEAASFLIRQFKKLYTTERQQRAAALGFNEHSLLTLASIVEAETPLDKEKPTVASVYLHRLRIGMR LQADPTVQYALGGTTRRLYYKDLAIASPYNTYRNKGLPPGPICNPGKASIIAVLNAPQSGYLYFVATGTGGHYFGASLQE HHANVQKYKQARSSNE >Mature_336_residues MKSPRSFITRLILAVTLLIAAFPLGFLLIPGLNSKSKPTQLVVHREMRFSDVLDKLQASGAIRERWQPELIARMVPKFRT IKAGRYTIPPNTSNFGLLWYLRTHPLDEVRVTLPEGIDRRKMARILSRKLDFDSTQFMAATENPRLLAKYGIRASHAEGY LLPGTYDFAWGSSPDEAASFLIRQFKKLYTTERQQRAAALGFNEHSLLTLASIVEAETPLDKEKPTVASVYLHRLRIGMR LQADPTVQYALGGTTRRLYYKDLAIASPYNTYRNKGLPPGPICNPGKASIIAVLNAPQSGYLYFVATGTGGHYFGASLQE HHANVQKYKQARSSNE
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=274, Percent_Identity=33.9416058394161, Blast_Score=128, Evalue=5e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 37712; Mature: 37712
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSPRSFITRLILAVTLLIAAFPLGFLLIPGLNSKSKPTQLVVHREMRFSDVLDKLQASG CCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHCC AIRERWQPELIARMVPKFRTIKAGRYTIPPNTSNFGLLWYLRTHPLDEVRVTLPEGIDRR HHHHCCCHHHHHHHCCHHHEECCCEEECCCCCCCEEEEEEEECCCCCCEEEECCCCCCHH KMARILSRKLDFDSTQFMAATENPRLLAKYGIRASHAEGYLLPGTYDFAWGSSPDEAASF HHHHHHHHHCCCCCCEEEEECCCCCEEEHHCCEECCCCCEECCCCCCCCCCCCHHHHHHH LIRQFKKLYTTERQQRAAALGFNEHSLLTLASIVEAETPLDKEKPTVASVYLHRLRIGMR HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCE LQADPTVQYALGGTTRRLYYKDLAIASPYNTYRNKGLPPGPICNPGKASIIAVLNAPQSG ECCCCCEEEEECCCEEEEEEHHHHCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEECCCCC YLYFVATGTGGHYFGASLQEHHANVQKYKQARSSNE EEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKSPRSFITRLILAVTLLIAAFPLGFLLIPGLNSKSKPTQLVVHREMRFSDVLDKLQASG CCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHCC AIRERWQPELIARMVPKFRTIKAGRYTIPPNTSNFGLLWYLRTHPLDEVRVTLPEGIDRR HHHHCCCHHHHHHHCCHHHEECCCEEECCCCCCCEEEEEEEECCCCCCEEEECCCCCCHH KMARILSRKLDFDSTQFMAATENPRLLAKYGIRASHAEGYLLPGTYDFAWGSSPDEAASF HHHHHHHHHCCCCCCEEEEECCCCCEEEHHCCEECCCCCEECCCCCCCCCCCCHHHHHHH LIRQFKKLYTTERQQRAAALGFNEHSLLTLASIVEAETPLDKEKPTVASVYLHRLRIGMR HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCE LQADPTVQYALGGTTRRLYYKDLAIASPYNTYRNKGLPPGPICNPGKASIIAVLNAPQSG ECCCCCEEEEECCCEEEEEEHHHHCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEECCCCC YLYFVATGTGGHYFGASLQEHHANVQKYKQARSSNE EEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]