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The map label for this gene is chlP [H]

Identifier: 78188019

GI number: 78188019

Start: 37150

End: 38292

Strand: Reverse

Name: chlP [H]

Synonym: Cag_0035

Alternate gene names: 78188019

Gene position: 38292-37150 (Counterclockwise)

Preceding gene: 78188020

Following gene: 78188018

Centisome position: 1.49

GC content: 47.86

Gene sequence:

>1143_bases
ATGCAATACGATGTTGCGGTTATTGGAGGCGGTCCCTCAGGCGCTGTTGCAGCAGCAATGCTTGCTCGTGCAGGATTTTC
GGTGGTGTTGCTTGAGCGCAATCTTGATAACGTCAAGCCGTGCGGTGGAGCAATTCCACTTGGTTTAATTGAGGAATTCA
ACATTCCCGCAGAACTTGTTGAAAAAAAGCTCACCCGCATGAAAGCGCGTTCACCAAAAGGGCGCGTTATTGATATGCAC
ATGCCAAACGGCTATGTGGGCATGGTGCGGCGCGAAAAGTTCGATCGCTATTTACGCGAAGAGGCTGAACGGGCAGGCGC
AACCGTTGTTGAAGGGTTGGTAAGCAGCATTACCTCCAACGGAGATGCCTTTGTTCTTAAAACGCTGAACGACAAAGTGG
CACCGTTGCAAGCACGCCGCATTATTGGTGCTGATGGCGCTAACTCCAAAACGGCTGATGAGTTGCGCTTTCCACCCAAC
GAGCTGAAGGTGATTGCTATGCAGCAGCGCTTTCACTACACGCCATCAATTGAGAAGTTTAGTGATATTGTTGAAATTTG
GTTTGATGGAGAAGTTTCGCCCGACTTTTATGGATGGATTTTTCCAAAAGCCGATCACCTTGCAATTGGCACAGGCACCG
AAGATCGCAAGCACAACATTAAAGCATTGCAAAAGCGCTTTGTTGAAAAGATAGGCATTACCGATAAACCCTATCTTGAC
GAAGCGGCAAAAATCCCCATGAAGCCTCGCCGCTCTTTTACGCAAGAAAAAGCCATTTTAGTAGGCGACGCTGCGGGATT
GGTAACACCAGCAAATGGCGAAGGCATCTTTTTTGCCATGCGCTCAGGCAAACTTGGCGCTCAAGCAATGATTGAACACC
TCAAGCAAGGCAAACCACTCAGCAACTACGAACAAGAGTTCCGCAAACTCTACGCACCAATCTTTTTTGGCTTGGAAGTG
CTCCAAGTTGCTTACTACCGCAACGACCGCCTTCGCGAAAGCTTTGTAGCCATTTGCGCCGATGACGATGTACAACGCAT
CACCTTTGATTCCTATCTCTACAAAAAGATGATTCCTGCGCCTTGGTCAGTGCAAATGAAGATTTTTGGGAAAAATATCT
ACCACCTTATTAAAGGCTCATAA

Upstream 100 bases:

>100_bases
TGAGAGTGTAACGGTGCGCTATCGCGACAGCGCCGCGCAAGAGCGCATTGCACTATCGCGCGTTCAGGAATTTCTTGCCA
CCAACCTTATTTAAAGCCCT

Downstream 100 bases:

>100_bases
TGCTGCTCTCGCTGCCAAATTGGATTATTCATATCTCCTCATCATTGGAATGGGGCATTGGCGCTGCACTGCTCTTCCAT
TATGGGCAACTTACCGAGCG

Product: geranylgeranyl reductase

Products: NA

Alternate protein names: Geranylgeranyl reductase [H]

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MQYDVAVIGGGPSGAVAAAMLARAGFSVVLLERNLDNVKPCGGAIPLGLIEEFNIPAELVEKKLTRMKARSPKGRVIDMH
MPNGYVGMVRREKFDRYLREEAERAGATVVEGLVSSITSNGDAFVLKTLNDKVAPLQARRIIGADGANSKTADELRFPPN
ELKVIAMQQRFHYTPSIEKFSDIVEIWFDGEVSPDFYGWIFPKADHLAIGTGTEDRKHNIKALQKRFVEKIGITDKPYLD
EAAKIPMKPRRSFTQEKAILVGDAAGLVTPANGEGIFFAMRSGKLGAQAMIEHLKQGKPLSNYEQEFRKLYAPIFFGLEV
LQVAYYRNDRLRESFVAICADDDVQRITFDSYLYKKMIPAPWSVQMKIFGKNIYHLIKGS

Sequences:

>Translated_380_residues
MQYDVAVIGGGPSGAVAAAMLARAGFSVVLLERNLDNVKPCGGAIPLGLIEEFNIPAELVEKKLTRMKARSPKGRVIDMH
MPNGYVGMVRREKFDRYLREEAERAGATVVEGLVSSITSNGDAFVLKTLNDKVAPLQARRIIGADGANSKTADELRFPPN
ELKVIAMQQRFHYTPSIEKFSDIVEIWFDGEVSPDFYGWIFPKADHLAIGTGTEDRKHNIKALQKRFVEKIGITDKPYLD
EAAKIPMKPRRSFTQEKAILVGDAAGLVTPANGEGIFFAMRSGKLGAQAMIEHLKQGKPLSNYEQEFRKLYAPIFFGLEV
LQVAYYRNDRLRESFVAICADDDVQRITFDSYLYKKMIPAPWSVQMKIFGKNIYHLIKGS
>Mature_380_residues
MQYDVAVIGGGPSGAVAAAMLARAGFSVVLLERNLDNVKPCGGAIPLGLIEEFNIPAELVEKKLTRMKARSPKGRVIDMH
MPNGYVGMVRREKFDRYLREEAERAGATVVEGLVSSITSNGDAFVLKTLNDKVAPLQARRIIGADGANSKTADELRFPPN
ELKVIAMQQRFHYTPSIEKFSDIVEIWFDGEVSPDFYGWIFPKADHLAIGTGTEDRKHNIKALQKRFVEKIGITDKPYLD
EAAKIPMKPRRSFTQEKAILVGDAAGLVTPANGEGIFFAMRSGKLGAQAMIEHLKQGKPLSNYEQEFRKLYAPIFFGLEV
LQVAYYRNDRLRESFVAICADDDVQRITFDSYLYKKMIPAPWSVQMKIFGKNIYHLIKGS

Specific function: Catalyzes the stepwise hydrogenation of geranylgeraniol to phytol during chlorophyll A (ChlA) biosynthesis [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the geranylgeranyl reductase family. ChlP subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010253
- InterPro:   IPR011774
- InterPro:   IPR011777
- InterPro:   IPR002938
- InterPro:   IPR016040
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: =1.3.1.83 [H]

Molecular weight: Translated: 42439; Mature: 42439

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYDVAVIGGGPSGAVAAAMLARAGFSVVLLERNLDNVKPCGGAIPLGLIEEFNIPAELV
CCEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHCCCCHHHH
EKKLTRMKARSPKGRVIDMHMPNGYVGMVRREKFDRYLREEAERAGATVVEGLVSSITSN
HHHHHHHHCCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
GDAFVLKTLNDKVAPLQARRIIGADGANSKTADELRFPPNELKVIAMQQRFHYTPSIEKF
CCEEEEEECCCCCCCHHHHHEECCCCCCCCCCHHCCCCCCCEEEEEEHHHCCCCCCHHHH
SDIVEIWFDGEVSPDFYGWIFPKADHLAIGTGTEDRKHNIKALQKRFVEKIGITDKPYLD
HHHHHHEECCCCCCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
EAAKIPMKPRRSFTQEKAILVGDAAGLVTPANGEGIFFAMRSGKLGAQAMIEHLKQGKPL
HHHCCCCCCCHHHCCCCEEEEECCCCEEECCCCCEEEEEEECCCCCHHHHHHHHHCCCCC
SNYEQEFRKLYAPIFFGLEVLQVAYYRNDRLRESFVAICADDDVQRITFDSYLYKKMIPA
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEECCCCCCEEEHHHHHHHHHCCC
PWSVQMKIFGKNIYHLIKGS
CCEEEEEEECCCEEHHCCCC
>Mature Secondary Structure
MQYDVAVIGGGPSGAVAAAMLARAGFSVVLLERNLDNVKPCGGAIPLGLIEEFNIPAELV
CCEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHCCCCHHHH
EKKLTRMKARSPKGRVIDMHMPNGYVGMVRREKFDRYLREEAERAGATVVEGLVSSITSN
HHHHHHHHCCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCC
GDAFVLKTLNDKVAPLQARRIIGADGANSKTADELRFPPNELKVIAMQQRFHYTPSIEKF
CCEEEEEECCCCCCCHHHHHEECCCCCCCCCCHHCCCCCCCEEEEEEHHHCCCCCCHHHH
SDIVEIWFDGEVSPDFYGWIFPKADHLAIGTGTEDRKHNIKALQKRFVEKIGITDKPYLD
HHHHHHEECCCCCCCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
EAAKIPMKPRRSFTQEKAILVGDAAGLVTPANGEGIFFAMRSGKLGAQAMIEHLKQGKPL
HHHCCCCCCCHHHCCCCEEEEECCCCEEECCCCCEEEEEEECCCCCHHHHHHHHHCCCCC
SNYEQEFRKLYAPIFFGLEVLQVAYYRNDRLRESFVAICADDDVQRITFDSYLYKKMIPA
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEECCCCCCEEEHHHHHHHHHCCC
PWSVQMKIFGKNIYHLIKGS
CCEEEEEEECCCEEHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8766814; 8905231 [H]