| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
Click here to switch to the map view.
The map label for this gene is plcN [H]
Identifier: 78067969
GI number: 78067969
Start: 3671579
End: 3673753
Strand: Reverse
Name: plcN [H]
Synonym: Bcep18194_A6500
Alternate gene names: 78067969
Gene position: 3673753-3671579 (Counterclockwise)
Preceding gene: 78067971
Following gene: 78067968
Centisome position: 99.45
GC content: 67.36
Gene sequence:
>2175_bases ATGTCTTCGAACAATCGACGCGATTTCCTGCGCCTCGCCGCGCAGTCGGCCGGCGCGATGGCCGCCTACGCGGGCTTCCC GCCCGCGATCCGCAATGCGCTGGCGATGCCGGCCGCCTATCGCACGGGTACGATCCGCGACGTCGAACACGTCGTGATCT TCATGCAGGAAAACCGTTCGTTCGACCATTACTTCGGCGGGCTGCGCGGCGTGCGCGGCTTCAACGATCCGCGCCCGCAC CTGCTGCCGAGCGGCGCACCGGTGTGGCAGCAGCCGCCGGCGTCGGTGTTCACGAAGAACTACCATTCGCGCGGCCTCGA TTCGTCGGCGCCGTACGTGCTGCCGTTCTACCTCGATCCGAAGCAGACGACCGAATTCCAGCCGGGCACCAATCACGGCT GGAGCAGCGGCCACCTGTCCTGGAACAACGGCCAGTGGGACCAGTGGGTGAACCAGAAGCAGGACGTGCTGACGATGGGC TACCTGAAGCGCCAGGATCTCACGTACCACTACGCATTGGCCGACGCGTTCACGATCTGCGATTCGTACTTCTGCTCCGC GCACGCCGACACCGCGCCGAACCGCATCTACCTGTGGACCGGCACGGTCGACCCGCGCAACATCTACGGCAACCCGCCGA ACGGCCCGGGCATCGGCGAGCGCGACGACGTGAACGGCTACACGTGGACGACCTACGCGGAACGCCTCGAAAACGCGAAG ATCAGCTGGAAGGTGTACCAGGGCGGCACCGGCATCCCGGGCGACCCGACCGACAACTACACCGACAACTCGCTGATGTT CTTCAAGCGCTTCCAGGTGAAGGAAGGCGCGAGCGGCCCGCTGGTCGACAAGGGCGCATCGGACCACACGCTCGCCGAGC TGAAGGCCGACGTGCAGGCGAACCGGCTGCCGCAGGTGTCGTGGATCGTGTCGCCGTACAAGTACAGCGAGCACCCGCAG GCATCACCGACCGACGGCGCGTTCTACATCAACATGGTGCTCGAGGCGCTCACGTCGAACCCGGAAGTGTGGGCGAAGAC GGTGTTCATCCTGAACTACGACGAAAACGACGGCCTGTTCGACCACGTCGTGCCGCCGGTGCCGCCGGTGACGAGCGGCG TGGGCGGCCAGGGCATCGTGTCGTCGAACCTGCTGTCGAATCTCGGCGACGAACTGCTCGACCTGAACAAGTACCCGGGC GAAATGAGCCCGCTCGTGCCGGGCGCGGACCCGGGCGGCATCCAGCCGATTGGCCTCGGGCCGCGCGTGCCGCTGATCAT CATCTCGCCGTGGACGAAAGGCGGCTGGGTCTGCTCGGAGACGTTCGACCATACGTCGGTGCTGCGTTTCCTCGAAGCGC GTTTCGGCGTGAAGGAGCCGAACATCAGCGCATGGCGCCGGTCGATCTGCGGCGACCTCACGTCGGCATTCGACTTCTCC GCGCGCCCCGACACGCGCACGGTGAGCTTCACGGTGCCGCAGCACATCGCGACGGCCGGCCAGGCGTACCAGGTGCCCGC GCAGCAGTCGATGCCGGCGCAGGAGCCCGGCACGCGTCCGGCACGTGCGCTGCCGTACGAACTGTTCGTGCACAGCCGCG TGAGCGGGCACGACGACAGCGTGTCGCTCGACTTTGCGAACACCGGTGACGCAGGCGCGGCGTTCTACGTGTACGACCGC CGCAACCCGACGACGCCGCCGCGCCGCTATGCGGTGTCCGCGCACGACCGTTTCGTCGACACGTGGAACACGTCGGCCGC ACGCGGCGACTACCATCTCGCGGCCTACGGCCCGAACGGCTATCTGTGCGAGTTCCAGGGCAACACGCGGCTCGCGGCGG ACGGCCGCCACGCGAACGCCGAAGCGCGGATCGGCTACGACGTGCGCAACCGTCATGTGTACCTGCAACTGCGCAACAGC GGGCGCGCGACGTGCCGCGTGACGGTCGACAACGCATACAGCCACAAGCATGCGCGGACCTACACGCTGGAGCCGGGCGA GCGCATCGAGGATCACTTCGAGTTGTCGTCGAGCCACGGCTGGTACGATCTGACGATCAGCGCGACGACGCTGCGCGGCG GCGACGACAAGGTCGTGCGCCGCTTCGCGGGCCACGTCGAGACGGGCCGGCCGAGCCACAGCGATCCGGGGCCGGTGAAG CACACGACGGCCTGA
Upstream 100 bases:
>100_bases TCACGGCCGGGACACGCCGATGCGGGGTAATAACGGCAACGCACCACCGCCGGCCCCGCTCGACCGGCGCCCCACTCCTA CCGACAACAGGGTTCTCTTC
Downstream 100 bases:
>100_bases CGGCCGGCACATGTCGCGCGAGGCGGGCGAGGTCGGCCCGCCGCGCGACCACCGCCTGCCGGCTTTGTGTCGATTGCATT CCGGCAGGCGGAATTGGTTT
Product: phospholipase C
Products: NA
Alternate protein names: PLC-N; Phosphatidylcholine cholinephosphohydrolase; Phosphatidylcholine-hydrolyzing phospholipase C; PC-PLC [H]
Number of amino acids: Translated: 724; Mature: 723
Protein sequence:
>724_residues MSSNNRRDFLRLAAQSAGAMAAYAGFPPAIRNALAMPAAYRTGTIRDVEHVVIFMQENRSFDHYFGGLRGVRGFNDPRPH LLPSGAPVWQQPPASVFTKNYHSRGLDSSAPYVLPFYLDPKQTTEFQPGTNHGWSSGHLSWNNGQWDQWVNQKQDVLTMG YLKRQDLTYHYALADAFTICDSYFCSAHADTAPNRIYLWTGTVDPRNIYGNPPNGPGIGERDDVNGYTWTTYAERLENAK ISWKVYQGGTGIPGDPTDNYTDNSLMFFKRFQVKEGASGPLVDKGASDHTLAELKADVQANRLPQVSWIVSPYKYSEHPQ ASPTDGAFYINMVLEALTSNPEVWAKTVFILNYDENDGLFDHVVPPVPPVTSGVGGQGIVSSNLLSNLGDELLDLNKYPG EMSPLVPGADPGGIQPIGLGPRVPLIIISPWTKGGWVCSETFDHTSVLRFLEARFGVKEPNISAWRRSICGDLTSAFDFS ARPDTRTVSFTVPQHIATAGQAYQVPAQQSMPAQEPGTRPARALPYELFVHSRVSGHDDSVSLDFANTGDAGAAFYVYDR RNPTTPPRRYAVSAHDRFVDTWNTSAARGDYHLAAYGPNGYLCEFQGNTRLAADGRHANAEARIGYDVRNRHVYLQLRNS GRATCRVTVDNAYSHKHARTYTLEPGERIEDHFELSSSHGWYDLTISATTLRGGDDKVVRRFAGHVETGRPSHSDPGPVK HTTA
Sequences:
>Translated_724_residues MSSNNRRDFLRLAAQSAGAMAAYAGFPPAIRNALAMPAAYRTGTIRDVEHVVIFMQENRSFDHYFGGLRGVRGFNDPRPH LLPSGAPVWQQPPASVFTKNYHSRGLDSSAPYVLPFYLDPKQTTEFQPGTNHGWSSGHLSWNNGQWDQWVNQKQDVLTMG YLKRQDLTYHYALADAFTICDSYFCSAHADTAPNRIYLWTGTVDPRNIYGNPPNGPGIGERDDVNGYTWTTYAERLENAK ISWKVYQGGTGIPGDPTDNYTDNSLMFFKRFQVKEGASGPLVDKGASDHTLAELKADVQANRLPQVSWIVSPYKYSEHPQ ASPTDGAFYINMVLEALTSNPEVWAKTVFILNYDENDGLFDHVVPPVPPVTSGVGGQGIVSSNLLSNLGDELLDLNKYPG EMSPLVPGADPGGIQPIGLGPRVPLIIISPWTKGGWVCSETFDHTSVLRFLEARFGVKEPNISAWRRSICGDLTSAFDFS ARPDTRTVSFTVPQHIATAGQAYQVPAQQSMPAQEPGTRPARALPYELFVHSRVSGHDDSVSLDFANTGDAGAAFYVYDR RNPTTPPRRYAVSAHDRFVDTWNTSAARGDYHLAAYGPNGYLCEFQGNTRLAADGRHANAEARIGYDVRNRHVYLQLRNS GRATCRVTVDNAYSHKHARTYTLEPGERIEDHFELSSSHGWYDLTISATTLRGGDDKVVRRFAGHVETGRPSHSDPGPVK HTTA >Mature_723_residues SSNNRRDFLRLAAQSAGAMAAYAGFPPAIRNALAMPAAYRTGTIRDVEHVVIFMQENRSFDHYFGGLRGVRGFNDPRPHL LPSGAPVWQQPPASVFTKNYHSRGLDSSAPYVLPFYLDPKQTTEFQPGTNHGWSSGHLSWNNGQWDQWVNQKQDVLTMGY LKRQDLTYHYALADAFTICDSYFCSAHADTAPNRIYLWTGTVDPRNIYGNPPNGPGIGERDDVNGYTWTTYAERLENAKI SWKVYQGGTGIPGDPTDNYTDNSLMFFKRFQVKEGASGPLVDKGASDHTLAELKADVQANRLPQVSWIVSPYKYSEHPQA SPTDGAFYINMVLEALTSNPEVWAKTVFILNYDENDGLFDHVVPPVPPVTSGVGGQGIVSSNLLSNLGDELLDLNKYPGE MSPLVPGADPGGIQPIGLGPRVPLIIISPWTKGGWVCSETFDHTSVLRFLEARFGVKEPNISAWRRSICGDLTSAFDFSA RPDTRTVSFTVPQHIATAGQAYQVPAQQSMPAQEPGTRPARALPYELFVHSRVSGHDDSVSLDFANTGDAGAAFYVYDRR NPTTPPRRYAVSAHDRFVDTWNTSAARGDYHLAAYGPNGYLCEFQGNTRLAADGRHANAEARIGYDVRNRHVYLQLRNSG RATCRVTVDNAYSHKHARTYTLEPGERIEDHFELSSSHGWYDLTISATTLRGGDDKVVRRFAGHVETGRPSHSDPGPVKH TTA
Specific function: Hydrolyzes phosphatidylserine as well as phosphatidylcholine [H]
COG id: COG3511
COG function: function code M; Phospholipase C
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial phospholipase C family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007312 - InterPro: IPR008475 - InterPro: IPR017767 - InterPro: IPR006311 [H]
Pfam domain/function: PF05506 DUF756; PF04185 Phosphoesterase [H]
EC number: =3.1.4.3 [H]
Molecular weight: Translated: 80037; Mature: 79905
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNNRRDFLRLAAQSAGAMAAYAGFPPAIRNALAMPAAYRTGTIRDVEHVVIFMQENRS CCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCHHCCCCCCCEEEEEEEEECCCC FDHYFGGLRGVRGFNDPRPHLLPSGAPVWQQPPASVFTKNYHSRGLDSSAPYVLPFYLDP HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCCCCEEEEEEECC KQTTEFQPGTNHGWSSGHLSWNNGQWDQWVNQKQDVLTMGYLKRQDLTYHYALADAFTIC CCCCCCCCCCCCCCCCCEEECCCCCHHHHHCCHHCEEHHHHHHHCCCEEEEHHHHHHHHH DSYFCSAHADTAPNRIYLWTGTVDPRNIYGNPPNGPGIGERDDVNGYTWTTYAERLENAK HHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHCCCE ISWKVYQGGTGIPGDPTDNYTDNSLMFFKRFQVKEGASGPLVDKGASDHTLAELKADVQA EEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH NRLPQVSWIVSPYKYSEHPQASPTDGAFYINMVLEALTSNPEVWAKTVFILNYDENDGLF CCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCH DHVVPPVPPVTSGVGGQGIVSSNLLSNLGDELLDLNKYPGEMSPLVPGADPGGIQPIGLG HHCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCCCCCEEECCCC PRVPLIIISPWTKGGWVCSETFDHTSVLRFLEARFGVKEPNISAWRRSICGDLTSAFDFS CCCCEEEEECCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC ARPDTRTVSFTVPQHIATAGQAYQVPAQQSMPAQEPGTRPARALPYELFVHSRVSGHDDS CCCCCEEEEEECCHHHHCCCCEEECCHHHCCCCCCCCCCCHHCCCEEEEEECCCCCCCCC VSLDFANTGDAGAAFYVYDRRNPTTPPRRYAVSAHDRFVDTWNTSAARGDYHLAAYGPNG EEEEECCCCCCCEEEEEEECCCCCCCCCEEEECCCCCEEECCCCCCCCCCEEEEEECCCC YLCEFQGNTRLAADGRHANAEARIGYDVRNRHVYLQLRNSGRATCRVTVDNAYSHKHART EEEEECCCEEEEECCCCCCCCEEEEEEECCCEEEEEECCCCCEEEEEEECCCCCCCCCEE YTLEPGERIEDHFELSSSHGWYDLTISATTLRGGDDKVVRRFAGHVETGRPSHSDPGPVK EECCCCHHHHHHHHCCCCCCEEEEEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCC HTTA CCCC >Mature Secondary Structure SSNNRRDFLRLAAQSAGAMAAYAGFPPAIRNALAMPAAYRTGTIRDVEHVVIFMQENRS CCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCHHCCCCCCCEEEEEEEEECCCC FDHYFGGLRGVRGFNDPRPHLLPSGAPVWQQPPASVFTKNYHSRGLDSSAPYVLPFYLDP HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCCCCEEEEEEECC KQTTEFQPGTNHGWSSGHLSWNNGQWDQWVNQKQDVLTMGYLKRQDLTYHYALADAFTIC CCCCCCCCCCCCCCCCCEEECCCCCHHHHHCCHHCEEHHHHHHHCCCEEEEHHHHHHHHH DSYFCSAHADTAPNRIYLWTGTVDPRNIYGNPPNGPGIGERDDVNGYTWTTYAERLENAK HHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHCCCE ISWKVYQGGTGIPGDPTDNYTDNSLMFFKRFQVKEGASGPLVDKGASDHTLAELKADVQA EEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH NRLPQVSWIVSPYKYSEHPQASPTDGAFYINMVLEALTSNPEVWAKTVFILNYDENDGLF CCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCH DHVVPPVPPVTSGVGGQGIVSSNLLSNLGDELLDLNKYPGEMSPLVPGADPGGIQPIGLG HHCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCCCCCEEECCCC PRVPLIIISPWTKGGWVCSETFDHTSVLRFLEARFGVKEPNISAWRRSICGDLTSAFDFS CCCCEEEEECCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC ARPDTRTVSFTVPQHIATAGQAYQVPAQQSMPAQEPGTRPARALPYELFVHSRVSGHDDS CCCCCEEEEEECCHHHHCCCCEEECCHHHCCCCCCCCCCCHHCCCEEEEEECCCCCCCCC VSLDFANTGDAGAAFYVYDRRNPTTPPRRYAVSAHDRFVDTWNTSAARGDYHLAAYGPNG EEEEECCCCCCCEEEEEEECCCCCCCCCEEEECCCCCEEECCCCCCCCCCEEEEEECCCC YLCEFQGNTRLAADGRHANAEARIGYDVRNRHVYLQLRNSGRATCRVTVDNAYSHKHART EEEEECCCEEEEECCCCCCCCEEEEEEECCCEEEEEECCCCCEEEEEEECCCCCCCCCEE YTLEPGERIEDHFELSSSHGWYDLTISATTLRGGDDKVVRRFAGHVETGRPSHSDPGPVK EECCCCHHHHHHHHCCCCCCEEEEEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCC HTTA CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10523590 [H]