| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is dhaAF [H]
Identifier: 78067957
GI number: 78067957
Start: 3657670
End: 3658485
Strand: Direct
Name: dhaAF [H]
Synonym: Bcep18194_A6488
Alternate gene names: 78067957
Gene position: 3657670-3658485 (Clockwise)
Preceding gene: 78067955
Following gene: 78067963
Centisome position: 99.01
GC content: 68.26
Gene sequence:
>816_bases ATGCTCGAACTCGCCAATCGCTTCATTTTCGAAGGCCACCGGATTGCCTGGGGAACGCTCGGCGAAGGCCCGCCGCTCGT GCTCGTGCACGGCACGCCGTTTTCGTCGCAGGTGTGGCGGCGGATCGCACCGTGGCTCGCGCGGCGTCATCGCGTGTTCT TCTACGACCTGCTCGGCTACGGTCAGTCCGACATGCCTGACGCGGACGTGTCGCTCAGCCGCCAGAACCGGCTGTTCGGC GCGATGCTCGACGCGTGGAACATTTCGCGTCCGCGCGTGCTCGCGCACGACTACGGCGGCGCAACCGTGCTGCGCGCGCA CTTCCTCGACGGCGTCGACTATGCGGATCTCACCCTCGTGAATCCGGTCGCGATTACGCCGCAGGGTTCGCCGTTCGTGC GCCACGTCGCGCAGCACGAAGCCGCCTTCACCGGATTGCCTGCGTATGCGCATCACGCGCTCGTGTCGGCCTATCTCGAC AATGCGGTCGCCCGGCCGCTGAGCGACGAGGCGCTGTCGATCTACCGTGCGCCGTGGCTCACGCCCGACGGTCAGGCCGC GTTCTATCGCCAGATCGCGCAGATGCGCCAGCGCTACATCGAGGAAGTCGAGGCGCGTTACGCGCCGCCGGACTTTCCGG TGCGCATCGTGTGGGGCGAGGACGACGCGTGGATTCCGCTCGAACAGGGCCAGGCGCTGGCCGATCGCATCGCCAACGGC CAGCTGATCAGGGTGCCGCGCGCGGGCCACCTGGTGCAGGAAGATGCGCCGGAGGCGATCGTCGCGGCGGTGCTCGACGG GTCAGGGCACGGCTGA
Upstream 100 bases:
>100_bases GCTCGTGTCGAGTAACCATTTATTTCTACCTATCGGTTTCACACCCGGACAATCCGGAGTAACCTGTTAACAACCAAAAC AGGTTAGCACGGAGATGCCG
Downstream 100 bases:
>100_bases CGCCCGCTGTACCGCGCGTCGCTTTTTGCGTGCCGCGCCCCGCGTCAGAACACCGGCACGCCCTGCGCGAGCGTCGAAAT GAACTTCGCGGTGCGCGGAT
Product: Alpha/beta hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MLELANRFIFEGHRIAWGTLGEGPPLVLVHGTPFSSQVWRRIAPWLARRHRVFFYDLLGYGQSDMPDADVSLSRQNRLFG AMLDAWNISRPRVLAHDYGGATVLRAHFLDGVDYADLTLVNPVAITPQGSPFVRHVAQHEAAFTGLPAYAHHALVSAYLD NAVARPLSDEALSIYRAPWLTPDGQAAFYRQIAQMRQRYIEEVEARYAPPDFPVRIVWGEDDAWIPLEQGQALADRIANG QLIRVPRAGHLVQEDAPEAIVAAVLDGSGHG
Sequences:
>Translated_271_residues MLELANRFIFEGHRIAWGTLGEGPPLVLVHGTPFSSQVWRRIAPWLARRHRVFFYDLLGYGQSDMPDADVSLSRQNRLFG AMLDAWNISRPRVLAHDYGGATVLRAHFLDGVDYADLTLVNPVAITPQGSPFVRHVAQHEAAFTGLPAYAHHALVSAYLD NAVARPLSDEALSIYRAPWLTPDGQAAFYRQIAQMRQRYIEEVEARYAPPDFPVRIVWGEDDAWIPLEQGQALADRIANG QLIRVPRAGHLVQEDAPEAIVAAVLDGSGHG >Mature_271_residues MLELANRFIFEGHRIAWGTLGEGPPLVLVHGTPFSSQVWRRIAPWLARRHRVFFYDLLGYGQSDMPDADVSLSRQNRLFG AMLDAWNISRPRVLAHDYGGATVLRAHFLDGVDYADLTLVNPVAITPQGSPFVRHVAQHEAAFTGLPAYAHHALVSAYLD NAVARPLSDEALSIYRAPWLTPDGQAAFYRQIAQMRQRYIEEVEARYAPPDFPVRIVWGEDDAWIPLEQGQALADRIANG QLIRVPRAGHLVQEDAPEAIVAAVLDGSGHG
Specific function: Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons. Has a broad substrate specificity, which includes mono- and di- chlorinated
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the haloalkane dehalogenase family. Type 2 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.8.1.5 [H]
Molecular weight: Translated: 30116; Mature: 30116
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLELANRFIFEGHRIAWGTLGEGPPLVLVHGTPFSSQVWRRIAPWLARRHRVFFYDLLGY CCCHHHHHHCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCEEEEEECCC GQSDMPDADVSLSRQNRLFGAMLDAWNISRPRVLAHDYGGATVLRAHFLDGVDYADLTLV CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCEEEE NPVAITPQGSPFVRHVAQHEAAFTGLPAYAHHALVSAYLDNAVARPLSDEALSIYRAPWL CCEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC TPDGQAAFYRQIAQMRQRYIEEVEARYAPPDFPVRIVWGEDDAWIPLEQGQALADRIANG CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEHHCCHHHHHHHCCC QLIRVPRAGHLVQEDAPEAIVAAVLDGSGHG CEEEECCCCCCHHCCCCHHEEEEEECCCCCC >Mature Secondary Structure MLELANRFIFEGHRIAWGTLGEGPPLVLVHGTPFSSQVWRRIAPWLARRHRVFFYDLLGY CCCHHHHHHCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCEEEEEECCC GQSDMPDADVSLSRQNRLFGAMLDAWNISRPRVLAHDYGGATVLRAHFLDGVDYADLTLV CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCEEEE NPVAITPQGSPFVRHVAQHEAAFTGLPAYAHHALVSAYLDNAVARPLSDEALSIYRAPWL CCEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC TPDGQAAFYRQIAQMRQRYIEEVEARYAPPDFPVRIVWGEDDAWIPLEQGQALADRIANG CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEHHCCHHHHHHHCCC QLIRVPRAGHLVQEDAPEAIVAAVLDGSGHG CEEEECCCCCCHHCCCCHHEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10094681; 10735862 [H]