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The map label for this gene is smf [H]

Identifier: 78067948

GI number: 78067948

Start: 3646915

End: 3648261

Strand: Direct

Name: smf [H]

Synonym: Bcep18194_A6479

Alternate gene names: 78067948

Gene position: 3646915-3648261 (Clockwise)

Preceding gene: 78067934

Following gene: 78067949

Centisome position: 98.72

GC content: 73.2

Gene sequence:

>1347_bases
ATGGCGCCACGCGGTCCGCTGGCCACCGCATTCGAGGGGCGCCTCATGTCGCCGCAAGCGCTGACCACCTCCGCCGTGCG
CGCGTGGCTGCAGCTCGCGCACGCACCCGGCCTCACACCCGCCGTACTGCAGGCACTGCTCGATGCGTTCGGCTCGCCGG
ACGCGCTGCTGCGTGCGCCCGACCAGGCCATCGCCGCCGTTACCGGCCCTGCCGCCGCCCAGGCCGTGCGCGCAAGCGAG
CGCGACGATCTCGACACCCGCACCGGCGCCGTGCTCGCGTGGCTCGACACGCCGGGCAATACGCTCGTCACGTTCAACGA
TCCGGCCTACCCGCCGCGGCTGCGCGACCTGCACGATCCGCCGCCACTGCTATATGTAAAGGGCCGGCTCGACCTGCTGC
ACGCGCGCAGTCTCGCCGTGGTCGGCAGCCGTCACGCAACGCCGCAGGGGCTCGCCGACGCAACACGCTTCGCACGCGAA
CTGTCCGACGCCGGGCTTCCGATCGTGTCCGGGCTCGCGCTCGGGATCGACGGCGCCGCGCATCGTGGCGGGCTCGACGG
CCGGTCGGGCACGGTCGCGGTGATCGCGACCGGCGCCGATCTCGTCTATCCGGCGCGACACCGCGCACTCGCCCACGAGA
TCGCCGCACACGGCGCGATCGTGTCGGAGTGGCCGCTCGGCACACCGGCCCGCGCCGCGCACTTCCCGCAGCGCAACCGG
CTGATCGCCGCGCTCGCGATCGGTGCACTCGTCGTCGAGGCCGCGCCGCGCTCCGGCTCGCTCATCACCGCGCGACTCGC
GAACGAACTGGGGCGCGACGTGTTCGCGATGCCGGGCTCGATCCATGCGCCGCTCGCGCAGGGCTGCCACGCACTGATCC
GCGACGGCGCGAAGCTGACGTCGGCACCGCTCGACGTGCTCGAGGAATACGGGCTGGGCGAATCGAAAGCCGGCGTGGCA
AGCGGTGCGGCGTGTTCCGGGCATCCGTGCACGGACACCGGCGACCTCCACGAAGCCGAAGCCGCCACTCAGCGCGCCGC
TACCGGGGTTATCCAGACTGGCGACGCCGCTCCGGCCACCGCGCCTGCCCGAGACGAAGCACCGTCGCCGGCGCCACCGC
TGCCCGGCACTCCATCCGAACAGGCCGTGCTGGCCGCATTGGGATACGGCCCCGTCACCTACGAATGGCTCGCCGAGCAC
AGCGGCCTGTCCGACGACGTGCTGCACCGCGCGCTGCTTGCGCTGGAACTGGCCGGCCGCGTCGCCAGCCTCCCCGGCGG
ACGCTTCGCGCGGCTTGACGCAGCGCGCACCCCGCCCGTGCACGGCGTGCTACATTCCCCCGCATAG

Upstream 100 bases:

>100_bases
GACGCGCGGCGAATCAATGCCGCGGATCATGCCTCCTGCAATTGGCCGGGCGCCTGCGCGCGCGGCCCTGTCGAGTATTT
CGGATGATGAAAATTTTATC

Downstream 100 bases:

>100_bases
GGGCGGCCAGGCCGCCAACGATACCCAAGGAAACCCATGCCCGCGCTGAATCTCGACACCGATGCAGATCGGATCGCCGA
GCGCCTCGCCGATCCCGGCA

Product: SMF protein

Products: NA

Alternate protein names: DNA-processing chain A [H]

Number of amino acids: Translated: 448; Mature: 447

Protein sequence:

>448_residues
MAPRGPLATAFEGRLMSPQALTTSAVRAWLQLAHAPGLTPAVLQALLDAFGSPDALLRAPDQAIAAVTGPAAAQAVRASE
RDDLDTRTGAVLAWLDTPGNTLVTFNDPAYPPRLRDLHDPPPLLYVKGRLDLLHARSLAVVGSRHATPQGLADATRFARE
LSDAGLPIVSGLALGIDGAAHRGGLDGRSGTVAVIATGADLVYPARHRALAHEIAAHGAIVSEWPLGTPARAAHFPQRNR
LIAALAIGALVVEAAPRSGSLITARLANELGRDVFAMPGSIHAPLAQGCHALIRDGAKLTSAPLDVLEEYGLGESKAGVA
SGAACSGHPCTDTGDLHEAEAATQRAATGVIQTGDAAPATAPARDEAPSPAPPLPGTPSEQAVLAALGYGPVTYEWLAEH
SGLSDDVLHRALLALELAGRVASLPGGRFARLDAARTPPVHGVLHSPA

Sequences:

>Translated_448_residues
MAPRGPLATAFEGRLMSPQALTTSAVRAWLQLAHAPGLTPAVLQALLDAFGSPDALLRAPDQAIAAVTGPAAAQAVRASE
RDDLDTRTGAVLAWLDTPGNTLVTFNDPAYPPRLRDLHDPPPLLYVKGRLDLLHARSLAVVGSRHATPQGLADATRFARE
LSDAGLPIVSGLALGIDGAAHRGGLDGRSGTVAVIATGADLVYPARHRALAHEIAAHGAIVSEWPLGTPARAAHFPQRNR
LIAALAIGALVVEAAPRSGSLITARLANELGRDVFAMPGSIHAPLAQGCHALIRDGAKLTSAPLDVLEEYGLGESKAGVA
SGAACSGHPCTDTGDLHEAEAATQRAATGVIQTGDAAPATAPARDEAPSPAPPLPGTPSEQAVLAALGYGPVTYEWLAEH
SGLSDDVLHRALLALELAGRVASLPGGRFARLDAARTPPVHGVLHSPA
>Mature_447_residues
APRGPLATAFEGRLMSPQALTTSAVRAWLQLAHAPGLTPAVLQALLDAFGSPDALLRAPDQAIAAVTGPAAAQAVRASER
DDLDTRTGAVLAWLDTPGNTLVTFNDPAYPPRLRDLHDPPPLLYVKGRLDLLHARSLAVVGSRHATPQGLADATRFAREL
SDAGLPIVSGLALGIDGAAHRGGLDGRSGTVAVIATGADLVYPARHRALAHEIAAHGAIVSEWPLGTPARAAHFPQRNRL
IAALAIGALVVEAAPRSGSLITARLANELGRDVFAMPGSIHAPLAQGCHALIRDGAKLTSAPLDVLEEYGLGESKAGVAS
GAACSGHPCTDTGDLHEAEAATQRAATGVIQTGDAAPATAPARDEAPSPAPPLPGTPSEQAVLAALGYGPVTYEWLAEHS
GLSDDVLHRALLALELAGRVASLPGGRFARLDAARTPPVHGVLHSPA

Specific function: Essential for efficient chromosomal DNA transformation but not required for plasmid transformation [H]

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=345, Percent_Identity=37.1014492753623, Blast_Score=178, Evalue=8e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 45868; Mature: 45737

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPRGPLATAFEGRLMSPQALTTSAVRAWLQLAHAPGLTPAVLQALLDAFGSPDALLRAP
CCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHCCC
DQAIAAVTGPAAAQAVRASERDDLDTRTGAVLAWLDTPGNTLVTFNDPAYPPRLRDLHDP
CHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCC
PPLLYVKGRLDLLHARSLAVVGSRHATPQGLADATRFARELSDAGLPIVSGLALGIDGAA
CCEEEECCCCEEHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
HRGGLDGRSGTVAVIATGADLVYPARHRALAHEIAAHGAIVSEWPLGTPARAAHFPQRNR
CCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCHHHHCCCCHHC
LIAALAIGALVVEAAPRSGSLITARLANELGRDVFAMPGSIHAPLAQGCHALIRDGAKLT
CHHHHHHHHHHHHCCCCCCCEEHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHCCCHHH
SAPLDVLEEYGLGESKAGVASGAACSGHPCTDTGDLHEAEAATQRAATGVIQTGDAAPAT
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEECCCCCCCC
APARDEAPSPAPPLPGTPSEQAVLAALGYGPVTYEWLAEHSGLSDDVLHRALLALELAGR
CCCCCCCCCCCCCCCCCCCHHHHEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VASLPGGRFARLDAARTPPVHGVLHSPA
HHCCCCCCEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
APRGPLATAFEGRLMSPQALTTSAVRAWLQLAHAPGLTPAVLQALLDAFGSPDALLRAP
CCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHCCC
DQAIAAVTGPAAAQAVRASERDDLDTRTGAVLAWLDTPGNTLVTFNDPAYPPRLRDLHDP
CHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCC
PPLLYVKGRLDLLHARSLAVVGSRHATPQGLADATRFARELSDAGLPIVSGLALGIDGAA
CCEEEECCCCEEHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC
HRGGLDGRSGTVAVIATGADLVYPARHRALAHEIAAHGAIVSEWPLGTPARAAHFPQRNR
CCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCHHHHCCCCHHC
LIAALAIGALVVEAAPRSGSLITARLANELGRDVFAMPGSIHAPLAQGCHALIRDGAKLT
CHHHHHHHHHHHHCCCCCCCEEHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHCCCHHH
SAPLDVLEEYGLGESKAGVASGAACSGHPCTDTGDLHEAEAATQRAATGVIQTGDAAPAT
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEECCCCCCCC
APARDEAPSPAPPLPGTPSEQAVLAALGYGPVTYEWLAEHSGLSDDVLHRALLALELAGR
CCCCCCCCCCCCCCCCCCCHHHHEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VASLPGGRFARLDAARTPPVHGVLHSPA
HHCCCCCCEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7768823; 7542800 [H]