| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
Click here to switch to the map view.
The map label for this gene is 78067942
Identifier: 78067942
GI number: 78067942
Start: 3641277
End: 3641867
Strand: Reverse
Name: 78067942
Synonym: Bcep18194_A6473
Alternate gene names: NA
Gene position: 3641867-3641277 (Counterclockwise)
Preceding gene: 78067943
Following gene: 78067941
Centisome position: 98.59
GC content: 63.28
Gene sequence:
>591_bases GTGACGATCAAACACCTTTTTCCACTTCGGCTCGCGGCCGTCCTGATGGTCGCGTTGACGCTGTGCCTGGCCCTCGTCCG GCCGGCGCATGCCGAGTCGATCGCCGTGCAGCGTGCGTCGCTCCAGTCCGACGGAAGCGGCTGGGCGCTCGACGCCCGCT TCGATTTCGAACTGAACCCGAACCTCGAGGATGCCGTCAACAAAGGCATTCCGCTTTACTTCACGACCGACTTCGAGTTG AGTCGTGCGCGCTGGTACTGGTTCGACGAGCAGCCGGTGGCGGTGACGCAGACGATCCGCCTGTCGTTCCAGCCGCTCAC GCGCGAGTATCGCGTGTCGACGGGCGGCCTGCAGCTCGGTTTTCCTTCGCTGAAGGATGCGCTCGCGGTCGTCAGGCACA TCACGTCGTGGCACGTGATCGACCGCAACCAGGTGCGCTCCGGTGAAACCTACACGGCATCGGTGCGGATGCAGCTCGAT ACGGCGCTGATGCCGAAGCCGTTCCAGGTCGATGCCGTGAACAACCGCGACTGGACGCTCGGGTCGGACTGGAAGCGCTT CAACTTCACGGTGACCGAACGTGCTAAATAA
Upstream 100 bases:
>100_bases GCCAGCTGCTGCCGGGCGGAGTGCAGGGAGGGGCGGCCGCCGGCGCACTCGACCAGAACACCGATCACGACGGATTTTTC TACGCGCAGTTTCAGAAACG
Downstream 100 bases:
>100_bases AGTGCGCCGCGCGGCCAGCGGGAAGAGCCTCCTCGTTCGCGTGATCGTCTCGACTGTCGCGCTCACCGCGCTGCTGCTGC TCGTGCTGCTCGCGGCCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Exported Protein
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MTIKHLFPLRLAAVLMVALTLCLALVRPAHAESIAVQRASLQSDGSGWALDARFDFELNPNLEDAVNKGIPLYFTTDFEL SRARWYWFDEQPVAVTQTIRLSFQPLTREYRVSTGGLQLGFPSLKDALAVVRHITSWHVIDRNQVRSGETYTASVRMQLD TALMPKPFQVDAVNNRDWTLGSDWKRFNFTVTERAK
Sequences:
>Translated_196_residues MTIKHLFPLRLAAVLMVALTLCLALVRPAHAESIAVQRASLQSDGSGWALDARFDFELNPNLEDAVNKGIPLYFTTDFEL SRARWYWFDEQPVAVTQTIRLSFQPLTREYRVSTGGLQLGFPSLKDALAVVRHITSWHVIDRNQVRSGETYTASVRMQLD TALMPKPFQVDAVNNRDWTLGSDWKRFNFTVTERAK >Mature_195_residues TIKHLFPLRLAAVLMVALTLCLALVRPAHAESIAVQRASLQSDGSGWALDARFDFELNPNLEDAVNKGIPLYFTTDFELS RARWYWFDEQPVAVTQTIRLSFQPLTREYRVSTGGLQLGFPSLKDALAVVRHITSWHVIDRNQVRSGETYTASVRMQLDT ALMPKPFQVDAVNNRDWTLGSDWKRFNFTVTERAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22328; Mature: 22197
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIKHLFPLRLAAVLMVALTLCLALVRPAHAESIAVQRASLQSDGSGWALDARFDFELNP CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEEEEEEECC NLEDAVNKGIPLYFTTDFELSRARWYWFDEQPVAVTQTIRLSFQPLTREYRVSTGGLQLG CHHHHHHCCCCEEEEECCEECCEEEEEECCCCEEEEEEEEEEECCCCCEEEECCCCEEEC FPSLKDALAVVRHITSWHVIDRNQVRSGETYTASVRMQLDTALMPKPFQVDAVNNRDWTL CHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEEEEEEEECCCCCCCCEEEEECCCCCCCC GSDWKRFNFTVTERAK CCCCEEEEEEEECCCC >Mature Secondary Structure TIKHLFPLRLAAVLMVALTLCLALVRPAHAESIAVQRASLQSDGSGWALDARFDFELNP CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEEEEEEECC NLEDAVNKGIPLYFTTDFELSRARWYWFDEQPVAVTQTIRLSFQPLTREYRVSTGGLQLG CHHHHHHCCCCEEEEECCEECCEEEEEECCCCEEEEEEEEEEECCCCCEEEECCCCEEEC FPSLKDALAVVRHITSWHVIDRNQVRSGETYTASVRMQLDTALMPKPFQVDAVNNRDWTL CHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEEEEEEEECCCCCCCCEEEEECCCCCCCC GSDWKRFNFTVTERAK CCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA