| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
Click here to switch to the map view.
The map label for this gene is yghZ [H]
Identifier: 78067896
GI number: 78067896
Start: 3594779
End: 3595822
Strand: Reverse
Name: yghZ [H]
Synonym: Bcep18194_A6427
Alternate gene names: 78067896
Gene position: 3595822-3594779 (Counterclockwise)
Preceding gene: 78067898
Following gene: 78067892
Centisome position: 97.34
GC content: 65.71
Gene sequence:
>1044_bases ATGGCCTACGAAGCAGCTTCCGAACGTTATGCCGGCATGCAATACCGCACCTGCGGCAAATCCGGGCTCAAACTGCCCGC GCTGTCGCTCGGCCTGTGGCACAACTTCGGCGACTCGACGCCGATCTCGACGCAGCGCGACATTCTGCGCACCGCGTTCG ACCTCGGCATCAACCACTTCGATCTCGCGAACAACTACGGGCCGCCGTACGGCAGCGCGGAAACCAACTTCGGCCGGCTG CTGAAGGAAGATTTCCGGCCGTATCGCGACGAGCTGCTGATCTCGACGAAGGCCGGCTGGGACATGTGGCCGGGGCCGTA CGGCAGCGGCGGCGGGTCGCGCAAGTACGTGCTCGCGAGCCTCGACCAGAGCCTGCAGCGGATGGGGCTCGACTACGTCG ACATCTTCTATTCGCACCGCTTCGACGCGCATACTCCGCTCGAGGAAACGGCGGGCGCGCTCGCGTCGGCCGTGCAGCAA GGCAAGGCGCTCTACATCGGCATTTCGTCGTACTCGGCGGCGAAGACGCGCGAGATGGCCGAGCTGCTCGCGCAGTACAA GGTGCCGCTGCTGATCCACCAGCCGTCGTACAACCTGCTGAACCGCTGGGTCGAAACCGAACTGCTCGGCACGCTCGACG AGATCGGCACGGGCAGCATTGCGTTCACGCCGCTCGCGCAGGGGCTGCTCACGTCGAAGTACCTGAACGGCGTGCCGGCC GACGCGCGTGTGAACAAGCCGGGCGGCGGCTCGCTGAAGCAGGATCACCTGAGCGCGGACAACCTCGACCACGTGCGCAA GCTCAACGCGATCGCCGAGCGGCGCGGGCAGAGCCTCGCGCAGATGGCGCTCGCATGGGTGTTGCGCAACGGCCGCGTGA CGTCCGCGCTGATCGGCGCAAGCCGGGCGGAACAGGTGCGTGAGAACGTCGGCGCGCTGAAGAACCTCGAATTCTCGGCG GAAGAACTCGCGGAGATCGATCGTCACGCGACGGAAGGCGGCATCAATTTGTGGGAAAAGCCGTCCACCGATCAGGCGAT CTGA
Upstream 100 bases:
>100_bases CTTTCGCTACCATAGTCGTCGTATGACTCCTTCGCCGCCGCCGCGCCGCATGCGCGGCCGGCGCGCGTCTCCTCTCCCGA TGTCCTGACGGAACCGACTC
Downstream 100 bases:
>100_bases CCGGCGGTCGATACGGCATGCGAAACATCGCGTGCCGTATCAATGGCCTGCGCGCAGCACATCGCATCGCTGCAATGCAG CGATGCACGCCACGCACGGG
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MAYEAASERYAGMQYRTCGKSGLKLPALSLGLWHNFGDSTPISTQRDILRTAFDLGINHFDLANNYGPPYGSAETNFGRL LKEDFRPYRDELLISTKAGWDMWPGPYGSGGGSRKYVLASLDQSLQRMGLDYVDIFYSHRFDAHTPLEETAGALASAVQQ GKALYIGISSYSAAKTREMAELLAQYKVPLLIHQPSYNLLNRWVETELLGTLDEIGTGSIAFTPLAQGLLTSKYLNGVPA DARVNKPGGGSLKQDHLSADNLDHVRKLNAIAERRGQSLAQMALAWVLRNGRVTSALIGASRAEQVRENVGALKNLEFSA EELAEIDRHATEGGINLWEKPSTDQAI
Sequences:
>Translated_347_residues MAYEAASERYAGMQYRTCGKSGLKLPALSLGLWHNFGDSTPISTQRDILRTAFDLGINHFDLANNYGPPYGSAETNFGRL LKEDFRPYRDELLISTKAGWDMWPGPYGSGGGSRKYVLASLDQSLQRMGLDYVDIFYSHRFDAHTPLEETAGALASAVQQ GKALYIGISSYSAAKTREMAELLAQYKVPLLIHQPSYNLLNRWVETELLGTLDEIGTGSIAFTPLAQGLLTSKYLNGVPA DARVNKPGGGSLKQDHLSADNLDHVRKLNAIAERRGQSLAQMALAWVLRNGRVTSALIGASRAEQVRENVGALKNLEFSA EELAEIDRHATEGGINLWEKPSTDQAI >Mature_346_residues AYEAASERYAGMQYRTCGKSGLKLPALSLGLWHNFGDSTPISTQRDILRTAFDLGINHFDLANNYGPPYGSAETNFGRLL KEDFRPYRDELLISTKAGWDMWPGPYGSGGGSRKYVLASLDQSLQRMGLDYVDIFYSHRFDAHTPLEETAGALASAVQQG KALYIGISSYSAAKTREMAELLAQYKVPLLIHQPSYNLLNRWVETELLGTLDEIGTGSIAFTPLAQGLLTSKYLNGVPAD ARVNKPGGGSLKQDHLSADNLDHVRKLNAIAERRGQSLAQMALAWVLRNGRVTSALIGASRAEQVRENVGALKNLEFSAE ELAEIDRHATEGGINLWEKPSTDQAI
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI27436969, Length=324, Percent_Identity=37.6543209876543, Blast_Score=197, Evalue=9e-51, Organism=Homo sapiens, GI4504825, Length=321, Percent_Identity=37.3831775700935, Blast_Score=194, Evalue=1e-49, Organism=Homo sapiens, GI27436964, Length=335, Percent_Identity=35.5223880597015, Blast_Score=194, Evalue=1e-49, Organism=Homo sapiens, GI27436962, Length=324, Percent_Identity=36.7283950617284, Blast_Score=192, Evalue=5e-49, Organism=Homo sapiens, GI27436966, Length=324, Percent_Identity=36.4197530864198, Blast_Score=189, Evalue=2e-48, Organism=Homo sapiens, GI27436971, Length=334, Percent_Identity=37.4251497005988, Blast_Score=188, Evalue=6e-48, Organism=Homo sapiens, GI41152114, Length=212, Percent_Identity=31.1320754716981, Blast_Score=83, Evalue=4e-16, Organism=Homo sapiens, GI41327764, Length=238, Percent_Identity=31.0924369747899, Blast_Score=82, Evalue=8e-16, Organism=Homo sapiens, GI223718702, Length=307, Percent_Identity=28.3387622149837, Blast_Score=80, Evalue=2e-15, Organism=Escherichia coli, GI1789375, Length=345, Percent_Identity=68.1159420289855, Blast_Score=478, Evalue=1e-136, Organism=Escherichia coli, GI87081735, Length=324, Percent_Identity=34.8765432098765, Blast_Score=158, Evalue=4e-40, Organism=Escherichia coli, GI1788070, Length=286, Percent_Identity=31.8181818181818, Blast_Score=109, Evalue=3e-25, Organism=Escherichia coli, GI1789199, Length=347, Percent_Identity=30.835734870317, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1788081, Length=317, Percent_Identity=26.813880126183, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1787674, Length=289, Percent_Identity=26.643598615917, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI48994888, Length=306, Percent_Identity=25.1633986928105, Blast_Score=63, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6325169, Length=338, Percent_Identity=27.5147928994083, Blast_Score=100, Evalue=5e-22, Organism=Saccharomyces cerevisiae, GI6319958, Length=289, Percent_Identity=26.2975778546713, Blast_Score=87, Evalue=5e-18, Organism=Saccharomyces cerevisiae, GI6323998, Length=323, Percent_Identity=25.6965944272446, Blast_Score=86, Evalue=7e-18, Organism=Saccharomyces cerevisiae, GI6322615, Length=250, Percent_Identity=26.4, Blast_Score=84, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6319951, Length=278, Percent_Identity=26.6187050359712, Blast_Score=77, Evalue=4e-15, Organism=Drosophila melanogaster, GI24640980, Length=341, Percent_Identity=28.7390029325513, Blast_Score=124, Evalue=7e-29, Organism=Drosophila melanogaster, GI45549126, Length=341, Percent_Identity=28.7390029325513, Blast_Score=124, Evalue=9e-29, Organism=Drosophila melanogaster, GI24646159, Length=322, Percent_Identity=24.8447204968944, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI24646155, Length=312, Percent_Identity=27.5641025641026, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR005399 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 38050; Mature: 37919
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYEAASERYAGMQYRTCGKSGLKLPALSLGLWHNFGDSTPISTQRDILRTAFDLGINHF CCCCCHHHHHCCCCEECCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCE DLANNYGPPYGSAETNFGRLLKEDFRPYRDELLISTKAGWDMWPGPYGSGGGSRKYVLAS ECCCCCCCCCCCCCCHHHHHHHHHCCHHHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHH LDQSLQRMGLDYVDIFYSHRFDAHTPLEETAGALASAVQQGKALYIGISSYSAAKTREMA HHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHH ELLAQYKVPLLIHQPSYNLLNRWVETELLGTLDEIGTGSIAFTPLAQGLLTSKYLNGVPA HHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCC DARVNKPGGGSLKQDHLSADNLDHVRKLNAIAERRGQSLAQMALAWVLRNGRVTSALIGA CCEECCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH SRAEQVRENVGALKNLEFSAEELAEIDRHATEGGINLWEKPSTDQAI HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure AYEAASERYAGMQYRTCGKSGLKLPALSLGLWHNFGDSTPISTQRDILRTAFDLGINHF CCCCHHHHHCCCCEECCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCE DLANNYGPPYGSAETNFGRLLKEDFRPYRDELLISTKAGWDMWPGPYGSGGGSRKYVLAS ECCCCCCCCCCCCCCHHHHHHHHHCCHHHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHH LDQSLQRMGLDYVDIFYSHRFDAHTPLEETAGALASAVQQGKALYIGISSYSAAKTREMA HHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHH ELLAQYKVPLLIHQPSYNLLNRWVETELLGTLDEIGTGSIAFTPLAQGLLTSKYLNGVPA HHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCC DARVNKPGGGSLKQDHLSADNLDHVRKLNAIAERRGQSLAQMALAWVLRNGRVTSALIGA CCEECCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH SRAEQVRENVGALKNLEFSAEELAEIDRHATEGGINLWEKPSTDQAI HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]