| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78067826
Identifier: 78067826
GI number: 78067826
Start: 3522592
End: 3523230
Strand: Reverse
Name: 78067826
Synonym: Bcep18194_A6357
Alternate gene names: NA
Gene position: 3523230-3522592 (Counterclockwise)
Preceding gene: 78067828
Following gene: 78067825
Centisome position: 95.37
GC content: 72.93
Gene sequence:
>639_bases ATGCAATCCGCTTCTCCGCCGGCCGCTCCGCCGCCGGCCACATCCCCCCGCAGCGTCGGCCTTGCCGAGCTGTTCACCGG TTTCCTGTCGCTGGGCCTCATGTCGTTCGGCGGTGCGCTGCCGTTCGCGCGGCGCACCATCGTCGAAGAGCGCAAGTGGC TCTCCGCCGACGAATTCACCGATCTGCTCGGGCTGTGCCAGTTCCTGCCGGGCGGCAACGTGATCAACCTGTCGGTGGCC GTCGGCATGCGCTTTCGCGGTGTCGCCGGCGCGTTCGCCGGCATTCTCGGGCTGATCGCGGGCCCGACGCTCGTCGTCGT CGCGCTCGGCGTGCTGTACGCGAAGACGCAGAACGATCCGCGCGTGCAGCACCTGTTCGCGGGGCTCGCGGCCGCGGCGG CCGGGCTGCTCGTCGCGATGGCCGTGAAGGTCTTGAAGCCGCTGCGGCACGCGCGGGCGGCGGCCGGCATCGCGGCGCTC GCGTTCGTCGCGATCGCGGTGCTGCGCATCCCGCTGCTGACCGCGATGCTCGTGCTGACACCGGTCAGCATCTGGCTTGC GTCGCGGCGCCGCGACGCGGGCACGCCGCAGCCCGCGCCGGCCGCGGCGCGCGACACGCAGCAAGGGGGGCGGCCATGA
Upstream 100 bases:
>100_bases CCATGCTTGTGATTCTAGATCACAAGGACGCGCCGATAAAATCGTTTTGCCGGTATTCCGAACGGCGGTAACCTCGGGTC ACCGTTTGATAAGGAACCCC
Downstream 100 bases:
>100_bases ACGACACGCTGATCGCCATCGCGACGATTTTCAGCCAGTTGTCGCTGCTCGCGTTCGGCGGCGGCAACACGATCCTGCCG GAGATGCAGCGGCAGGTCGT
Product: chromate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MQSASPPAAPPPATSPRSVGLAELFTGFLSLGLMSFGGALPFARRTIVEERKWLSADEFTDLLGLCQFLPGGNVINLSVA VGMRFRGVAGAFAGILGLIAGPTLVVVALGVLYAKTQNDPRVQHLFAGLAAAAAGLLVAMAVKVLKPLRHARAAAGIAAL AFVAIAVLRIPLLTAMLVLTPVSIWLASRRRDAGTPQPAPAAARDTQQGGRP
Sequences:
>Translated_212_residues MQSASPPAAPPPATSPRSVGLAELFTGFLSLGLMSFGGALPFARRTIVEERKWLSADEFTDLLGLCQFLPGGNVINLSVA VGMRFRGVAGAFAGILGLIAGPTLVVVALGVLYAKTQNDPRVQHLFAGLAAAAAGLLVAMAVKVLKPLRHARAAAGIAAL AFVAIAVLRIPLLTAMLVLTPVSIWLASRRRDAGTPQPAPAAARDTQQGGRP >Mature_212_residues MQSASPPAAPPPATSPRSVGLAELFTGFLSLGLMSFGGALPFARRTIVEERKWLSADEFTDLLGLCQFLPGGNVINLSVA VGMRFRGVAGAFAGILGLIAGPTLVVVALGVLYAKTQNDPRVQHLFAGLAAAAAGLLVAMAVKVLKPLRHARAAAGIAAL AFVAIAVLRIPLLTAMLVLTPVSIWLASRRRDAGTPQPAPAAARDTQQGGRP
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 - InterPro: IPR014047 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 21833; Mature: 21833
Theoretical pI: Translated: 11.95; Mature: 11.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSASPPAAPPPATSPRSVGLAELFTGFLSLGLMSFGGALPFARRTIVEERKWLSADEFT CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHH DLLGLCQFLPGGNVINLSVAVGMRFRGVAGAFAGILGLIAGPTLVVVALGVLYAKTQNDP HHHHHHHHCCCCCEEEEEHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH RVQHLFAGLAAAAAGLLVAMAVKVLKPLRHARAAAGIAALAFVAIAVLRIPLLTAMLVLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PVSIWLASRRRDAGTPQPAPAAARDTQQGGRP HHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCC >Mature Secondary Structure MQSASPPAAPPPATSPRSVGLAELFTGFLSLGLMSFGGALPFARRTIVEERKWLSADEFT CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHH DLLGLCQFLPGGNVINLSVAVGMRFRGVAGAFAGILGLIAGPTLVVVALGVLYAKTQNDP HHHHHHHHCCCCCEEEEEHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH RVQHLFAGLAAAAAGLLVAMAVKVLKPLRHARAAAGIAALAFVAIAVLRIPLLTAMLVLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PVSIWLASRRRDAGTPQPAPAAARDTQQGGRP HHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]